2nd Internals important Flashcards
Bacteria, virus, protozoa, fungi of GIT, RT, SKIN
Biochemical tests of staph aureus
Gram +
B hemolytic
Catalase, coagulase +
Biochemical tests of staph. Epidermidis
Catalase + Coagulase - Urease + Novobiocin sensitive Does not ferment mannitol
Biochemical tests of Staph. Saprophyticus
Catalase +
Coagulase -
Urease +
Novobiocin resistant
Biochemical tests of strep. Pneumoniae
A hemolytic
Lancelet shaped
Optochin sensitive
Bile soluble
Biochemical tests of strep. Viridans
A hemolytic
Optochin resistant
Bile insoluble
Cell wall VIRULENCE factors of Staph. Aureus
Peptidoglycan
Teichoic acid
Clumping factor - slide coagulase
Protein A - coaggultination - binds to Fc-IgG and protects from complement and phagocytosis
Toxins of staph. Aureus
Alpha, beta, gamma, delta hemolysins PV toxin Exfoliative toxin Enterotoxin TSST-1, TSST-2
Toxic manifestations of staph. Aureus
Toxic shock syndrome
Food poisoning (6-8 hrs)
Scalded Skin Syndrome
Inflammatory manifestations of staph. Aureus
Endocarditis Abscesses Impetigo Pneumonia Septic arthritis Osteomyelitis Skin infections
MRSA due to
Alteration in penicillin binding protein coded by mecA gene
Staph. Epidermidis causes
Prosthetic device related infections
Stitch abscess
Staph epidermidis protected by
Biofilm formation.
Protects it from host defence and antibiotics
Staph. Saprophyticus manifestations
UTI in female genital tract
Cell wall VIRULENCE factors of strep. Pyogenes
Lipoteichoic Acid
C carbohydrate antigens
M proteins
Capsule
Toxins of strep. Pyogenes
Streptolysin O
Streptolysin S
Streptococcal pyrogenic exotoxin - superantigens
Enzymes of strep. Pyogenes
Streptokinase
DNAse
Hyaluronidase
Immunological manifestations of strep. Pyogenes
Rheumatic fever
Glomerulonephritis
Toxin mediated manifestations of strep. Pyogenes
Toxic Shock like syndrome
Scarlet fever
Necrotising fasciitis
Pyogenic manifestations of strep. Pyogenes
Pharyngitis
Cellulitis
Impetigo - honey crusted lesions
Erysipelas
Biochemical tests of strep. Pyogenes
Bactiracin sensitive
Pyrrolidonyl arylamidase +
VIRULENCE factors of clostridium perfringes
Alpha, beta, epsilon, iota toxins
Heat labile enterotoxin
Bursting factor
Neuraminidase
Wound infections of c. Perfringens
Contamination
Cellulitis
Gas gangrene
Enteric infections of c. Perfringens
Food poisoning
Enteritis necroticans (Gas gangrene of bowel)
Necrotising enterocolitis
Gangrenous appendicitis
Mechanism of viridans streptococci
Makes dextrans that bind to fibrin-platelet aggregates on damaged heart valves -> subacute bacterial endocarditis
Scarlet fever
Blanching
Sandpaper like body rash
Strawberry tongue
Circumoral pallor
Biochemical tests of strep. Agalactiae
Bactiracin resistant Beta hemolytic Hippurate + PYR - CAMP + with staph. Aureus
Strep. Agalactiae affects
Babies (pneumonia)
Enterococci tests
Gram + Penicillin G resistant Catalase - PYR + Can grow in 6.5 percent NaCl and bile No hemolysis VRE
Bacillus cereus Manifestations
Emetic type - cereulide - 1-5 hrs
Diarrhreal type - water, non bloody diarrhea - 8-18hrs
Keratitis, meningitis, osteomyelitis, pneumonia
Properties of spores of bacillus cereus
Spores survive cooking rice (reheated rice syndrome)
Cooking - germination of spores and enterotoxin formation
Agar of bacillus cereus
MYPA - Mannitol, Egg Yolk, Polymyxin B, Phenol red agar
Clostridium botulinum toxin and it’s mechanism
Heat labile
Inhibits ACh release at NMJ
Clostridium botulinum mode of transmission
Baby - ingestion of spores (floppy baby syndrome)
Adult - ingestion of performed toxin
Clostridium botulinum treatment
Human botulinum Ig
Clostridium botulinum symptoms
Diplopia Dysarthria Dysphagia Dyspnea Descending flaccid paralysis
Clostridium botulinum toxin A therapeutic uses
Focal dystonia
Muscle spasms
Hyperhidrosis
Reduction of facial wrinkles
Morphology of Clostridium botulinum
Non capsulated
Gram +
Bacilli
Peritrichate flagella
Lab DX of Clostridium botulinum
RCM broth
Toxin demonstration: mouse bioassay
Clostridium perfringens causes
Gas gangrene
Food poisoning
Necrotising enterocolitis
Clostridium perfringens toxin and mechanism
Alpha toxin - lecithinase (phospholipase)
Activates platelet GP 2b/3a receptors on platelet -> platelet aggregation -> b.v occlusion
Also directly decreases myocardial contractility
Gas gangrene symptoms
Crepitus Foul smelling discharge Edema Pain Gangrenous tissue gets liquefied and is sloughed off
Lab DX of clostridium perfringens
Gram + Subterminal spores
Thick stubby bacilli
RCMB
Naeglers rxn - opalscene around streak line in egg yolk agar
Reverse CAMP - with S. Agalactiae
Clostridioides difficle toxins and mechanism
A and B - damage actin - cell shape and size -> water diarrhea, pseudomembranous colitis
Clostridioides difficle infection is due to
Prolonged antibiotic use (cephalosporin)
Clostridioides difficle agar
CCFA
CCYA
Cornybacterium diphtheria lab dx
Chinese letter pattern
Metachromatic granules (Loeffler media) Albert stain
Black colonies - cysteine tellurite agar
Eleks gel precipitation test
Cornybacterium diphtheria diseases
Diphtheria (pseudomembranous pharyngitis) Lymphadenopathy Myocarditis Arrythmias Neuropathy
Cornybacterium diphtheria mechanism
Beta prophage -> exotoxin -> ADP ribosylation of EF2 -> inhibit protein synthesis
H. Influenza manifestations
Epiglottitis
Meningitis
Otitis media
Pneumonia
Morphology of H. Influenza
Gram -
Coccobacilli
Capsulated/unencapsulated
H. Influenza produces
IgA protease
H. Influenza lab dx
Chocolate agar
Needs factor V and X
Or with S. Aureus - satellitism
Quellung reaction
H. Influenza vaccine from
Type b capsular polysaccharide
Bordutella pertussis morphology
Gram -
Coccobacilli
Bordutella pertussis toxins
Pertussis toxin
Adenylate cyclase Toxin
Tracheal cytotoxin
Bordutella pertussis stages
Catarrheal - Coryza, fever
Paroxysmal - whopping cough, vomiting
Convalescent - gradual recovery
Bordutella pertussis complications
Pressure (hemorrhage)
Pneumonia
Neurological
Bordutella pertussis lab dx
Alginate/dacron swabs
Charcoal based transport media
Culture - mercury drop
Smear - finger print
E coli biochemical tests
Gram - Indole + Citrate - Urease - TSI - A/A with gas without H2S
E coli VIRULENCE factors
Fimbriae - cystitis, pyelonephritis
K capsule - pneumonia, meningitis
LPS endotoxin - shock
Enteroinvasive E. Coli presentation and antigen
Dysentery (bloody stool with mucus)
Virulence Marker Ag
Enterotoxigenic E. Coli presentation and antigen
Travellers diarrhea
Colonizing factor Ag
Enteropathogenic E. Coli presentation and mechanism
Pediatric diarrhea
Flattens villi preventing absorption
Enterohemorrhagic E. Coli toxin
Shiga-like toxin
Enterohemorrhagic E. Coli manifestions
Dysentery
Hemolytic uremic syndrome - acute kidney failure + anaemia + TCP
(Shiga like toxin forms microthrombi on damaged endothelium)
Vibrio cholerae lab dx
Gram - Flagellated Comma shaped, darting motility in hanging drop Oxidase + Transport - Cary-Blair medium
Grows in alkaline medium - alkaline peptone water/bile salt agar for culture
Candida albicans causes
Oral thrush Vulvovaginitis Diaper rash Endocarditis Disseminated candidiasis Mucocutaneous candidiasis
Candida albicans morphology
Dimorphic
- Pseudohyphae and budding yeast at 20C
-Germ tubes at 37C
3 phenotypic forms - yeast, pseudohyphae, true hyphae
Candida albicans lab dx
Germ tube test +
SDA - creamy, white, pasty colonies
Asergillus causes
Invasive aspergillosis
Aflatoxin (HCC)
Aspergilloma in pre-existing lung cavities
Allergic bronchopulmonary aspergillosis
Allergic bronchopulmonary aspergillosis
Hypersensitivity response to aspergillus growing in lung mucus
Ass.. w/ asthma, Cystic fibrosis
Can cause: bronchiectasis
Aspergillus morphology and lab dx
Septate hyphae branched at 45 degree angle SDA: - fumigatus - green, velvety, powdery - Flavus - yellow - niger - black cottony
(Ref. Diagram)
Giardia lamblia clinical features
Bloating, flatulence, foul smelling, fatty diarrhea
Giardia lamblia morphology (parts)
Sucking disc Nucleus, karyosome Flagella Axoneme Parabasal body
Stool findings in Giardia lamblia
Pus cells and RBC are NEVER seen
Trichrome stain used
Formalin ether sedimentation for concentration
Special test for Giardia lamblia
Entero test
Other (than stool and XRay) lab dx of Giardia lamblia
Histo - giemsa stain
Ag detection - coproantigen
Culture - diamond media
X ray findings of Giardia lamblia
Fluoroscopy - hypermotility
Barium meal - irregular mucosal thickening + hypotonic bowel
Preservation of stool in E. Histolytica
Formalin
Stool macroscopy in E. Histolytica
Foul smelling
Dark red, mixed with mucus
Trophozoite appearance in E. Histolytica
Pseudopodia
Cartwheel nucleus
Interested RBC in cytoplasm
Cyst appearance in E. Histolytica
Chromatid bodies
Large glycogen mass
Histology of E. Histolytica
PAS stain
HE stain
Culture in E. Histolytica
NIH medium
Diamonds medium
Isoenzyme that can be analysed in E. Histolytica
Zymodene
General findings in E. Histolytica
Collar button/flask shaped ulcers
Charcot Leyden crystals in stool
Anchovy sauce exudate
Life cycle (Forms and sites of travel) of ascaris
Rhabditiform larva
Adult worm
Embryonated and unembryonated eggs
Right heart, lung, intestine
Lab findings in ascaris
Patchy infiltrates on XRay
Egg detection (cresentric space)
Adult worm - trolley car lines on XRay
Ancylostoma larva causes
Larva - cutaneous lesions, serpiginous tracks
Ancylostoma worm causes
Early - pain, diarrhea
Late - Fe def. Anaemia, malnutrition
Wakana disease
GI and pulmonary symptoms
Larva in ancylostoma
Filariform larva
Lab dx. Of ancylostoma
Egg -
Not bile stained,
4-32 blastomeres,
space b/w shell and embryo
Culture - charcoal culture method
Parts of adult tapeworm
Rostellum Hooks Suckers Neck Proglottids
Stages in tapeworm life cycle
Oncosphere
Cysticerus
Clinical features of tapeworm
Mild abd. Pain Nausea Loss of appetite Perianal discomfort Neurocysticercosis
Measles belongs to
Paramyxovirus
Stages of measles
Prodromal stage
Eruptive stage
Post measles
Features in prodromal stage of measles
Fever Kopliks spots Cough Coryza Conjunctivitis
Eruptive stage of measles
Rashes behind ears
Spread and fade in 4 days
Complications of measles
Secondary bacterial infections
Subacute sclerosing panencephalitis
Hachts pneumonia
Target tissues of measles
Skin
RT
Conjunctiva
Lab DX of measles
Nasopharyngeal swab
Isolation - Warthin Feinkeldy cells - multinucleated giant cells
Target tissues of mumps
Salivary glands Testis Ovary Breast CNS Pancreas
Clinical features of mumps
Bilateral parotitis Epidydymo orchitis Oophoritis Pancreatitis Meningitis
Isolation of mumps
Monkey kidney cell lines
Mumps strain used in vaccine
Jeryl Lynn strain
Rubella belongs to
Togaviridae
Clinical features of postnatal rubella
Maculopapular rash
Lymphadenopathy
Forrcheimer spots
Lab DX of rubella
Nasopharyngeal swabs
Isolation - monkey kidney cell lines
Ag detection confirmed by IgG avidity test