Week 11 - GMO And Linkage Disequalibrium Flashcards
What is the purpose of testing genetically modified (GM) crops?
To identify potential health and environmental risks.
What percentage of GM content in foods requires labeling in Europe and Asia?
> 1%
What two GMO-associated sequences does the GMO Investigator kit test for?
- 35S promoter of the cauliflower mosaic virus (CaMV 35S)
- Terminator of the nopaline synthase (NOS) gene of Agrobacterium tumefaciens
What are the two possible outcomes of a PCR test?
- Successful PCR (+ve outcome)
- Unsuccessful PCR (-ve outcome)
What does a +ve outcome indicate when testing for the integrity of plant DNA?
Plant DNA is present.
What does a -ve result indicate when testing the integrity of plant DNA?
Either plant DNA is degraded or something went wrong with PCR.
What does a +ve result indicate when testing for contamination using a non-GMO food control?
Presence of contamination.
What is the aim of the practical using the Biotechnology Explorer GMO Investigator Kit?
To test foods or animal feed to identify which contain GM genomes using PCR.
In the DNA extraction process, what is added to the screwcap tubes?
500uL of InstaGene.
What is the purpose of the master mix in PCR?
To provide necessary components for the PCR reaction.
What does the Plant MM in the PCR setup contain?
Photosystem II chloroplast gene primers.
What does the GMO MM in the PCR setup test for?
35S promoter and NOS terminator primers.
How are haplotypes shuffled each generation?
Through genetic recombination.
What is the significance of the distance between SNPs in recombination?
If SNPs are far apart, there are lots of recombinants; if close, few recombinants.
What does linkage disequilibrium (D) indicate?
Two genes are linked and do not behave as randomly unlinked alleles.