W10L2 Thues Gene therapy 2 Flashcards

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1
Q

The basis of genetic disease

A
  • Cells contain information that is inherited (DNA/genes)
  • Mutations in DNA cause genetic diseases
  • Generally there is no cure for genetic diseases with normal medicine
  • Gene therapy is a promising strategy to treat/cure genetic diseases
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2
Q

History of gene therapy

A
  • Concept proposed in 1972 by Theodore Friedmann and Richard Robin
  • Incorporating functional DNA into patient’s cells to treat genetic disorders
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3
Q

The first gene therapy

A

-4 year old girl have severe combined in 1990 immunodeficiency: lack of ADA and defective T, B cell
-retroviral vector carrying ADA gene into T cell
-10 infusion over 2 years
-restored immune fuction

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4
Q

Important consideration for gene therapy

A
  • Efficient vector for gene delivery
  • Gene expression & protein stability
  • Precision is key, a serious concern is “off target” effect
    -Avoide adverse immune respond
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5
Q

Type of gene therapy

A
  • Gene augmentation: Introduce healthy copy of gene
  • Gene editing: Correct genomic mutation(s)
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6
Q

Somatic vs germline gene therapy

A
  • Somatic gene therapy: genome modification in somatic cells
  • In vivo: the gene is transferred to cells inside the patient’s body
  • Ex vivo: gene therapy on patient’s cells outside of body, then transplant back to patient
  • Germline gene therapy: genome modification that will be carried to next generation
  • E.g. CRISPR baby, mitochondrial replacement therapy
  • Ethical considerations with manipulating the gene pool
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7
Q

Nuclear vs mitochondrial DNA

A
  • Nucleus: 23 chromosome pairs, ~46000 nucleus genes
  • Mitochondria: 37 mtDNA genes, multiple copies (homoplasmy, heteroplasmy)
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8
Q

Improving viral vector design

A

Better expression:
* Promoters: ubiquitous, cell-specific, truncated
* Kozak sequence
* other DNA regulatory elements: e.g. WPRE
Viral trophism:
* Modifying the viral capsid to improve specificity to target cells

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9
Q

inherited retinal degenerative disease LHON

A
  • Characterized by loss of optic nerve cells – the retinal ganglion cells (RGCs)
  • Most common mitochondrial DNA (mtDNA) disease, affecting ~ 1 in 30000 individuals, predominantly young males
  • Homoplasmy mtDNA disease
  • Central vision loss occurs usually around teenage to early twenties
  • All LHON cases are caused by mutation in mtDNA encoding for mitochondria
    Complex I subunits => Precise mechanism of how RGCs die is not known
  • Currently no effective treatment for LHON patients *
  • No clinical relevant model to study LHON disease:
  • Human primary RGCs are difficult to obtain and culture
  • Species differences in rodent models
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10
Q

Using in vitro cell models to test gene therapy

A

-extract the patient skin cell and reprogram it into iPS (hard to obtain nerve sample from living patient)
-Allow it to differentiate into eyecell
-eye cell can be use for drug screening and disease modeling
-genetic correction of the eye cell, apply it to the paitient

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11
Q

Genetic correction of LHON

A

For LHON, the cybrid technology can be used to replace mutated mitochondria with healthy donor mitochondria
-correction of LHON mutation rescue optics nerve cell death in LHON

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12
Q

Current clinical trials for LHON gene therapy

A

Gene augmentation to deliver healthy copy of ND4 gene (most common LHON mutation)
* Neuropath
* NR082: AAV2 vector carrying ND4 gene
* Chinese clinical trial – 9 patients with 7 years follow-up (Yuan 2020 Ophthalmology)
* Safe and vision improvement in some patients
* USA phase I clinical trials
* AAV2 vector carrying ND4 gene
* Phase I with 14 patients, 12 month follow-up: Safe and vision improvement in some patients (Guy et al 2017 Ophthalmology)
* Phase I with 28 patients, 24 month follow-up: Good safety profile, limited efficacy (Lam et al. Am J Ophthalmol)
* GenSight Biologics (France) Phase III clinical trials with 90 patients:
* Lumevoq/GS010: AAV2 vector carrying ND4 gene
* Multi-centre, randomized, double-blind, placebo-controlled trial
* bilateral visual improvement in patients with unilateral gene therapy (Newman 2021 Ophthalmology, Yu-Wai-Man 2020 Sci Transl Med)

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13
Q

Leber’s congenital amaurosis (LCA)

A
  • One of the most common causes of blindness in children affecting ~1 in 40000
  • Severe visual loss at birth
  • Other eye-related conditions such as abnormal sensitivity to light, roving eye movements
  • RPE65 mutation => inability to process vitamin A => degeneration of photoreceptors
    • There are other mutations that cause LCA: E.g. CEP290, CRB1, GUCY2D
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14
Q

Cure for LCA

A

-the first FDA approved gene therapy in the eye (2017)
-But extremely high cost 850K
-Approve in Australia in 2020
-2022, cost subsidize jointly by federal and Australia state goverment

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15
Q

Ethical consideration of gene therapy

A

-regulation of treatment
-consent
-risk and benefit
-cost
- germ line modification
-human modification/ enhancement

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16
Q

Solution for large package size

A

-precise gene editing to correct mutation
Some vertor:
-Zinc finger nuclease
-TAL effector nuclease (TALEN)
-CRISPR/CAS to edit, repress, active and splicing
-MegaTals

17
Q

Current challenges with retina gene therapy

A
  • Mutations in >300 genes are known to cause inherited retinal diseases (IRD)
  • Multiple mutations have been identified in individual disease-causing gene
  • Lot of work to fix each mutation/gene
18
Q

Future: Optogenetic gene therapy to restore vision

A
  • Optogenetics: introducing a light-sensing protein to activate neurons
  • Retrosense/Allegan isdeveloping a AAV gene therapy to introduce channelrhodopsin to make bipolar cells light-sensitive => bypassing the photoreceptors
  • Other studies use optogenetics to make ganglion cells (optic nerve cells) light-sensitive
19
Q

Future: Gene therapy to stimulate regeneration

A
  • At late stages of degeneration, there might not be sufficient cells left for pharmacological or gene therapy
  • Cell reprogramming: reprogram cell identity by controlling the genes in a cell
  • Cell reprogramming has been applied to regenerate cells in different organs in mice (eg, heart, liver, brain, spinal cord, eye)