Viruses Flashcards
Basic morphology of a virus
Nucleic acid (DNA or RNA)
Capsid
Envelope
What are the two types of RNA viruses?
+ stranded
- stranded
Describe positive stranded RNA viruses
RNA just like mRNA and can be translated immediately
Describe negative stranded RNA viruses
RNA needs to be transcribed into positive strand of RNA and the positive strand can then be translated
What special enzyme do negative RNA viruses carry?
RNA dependent RNA polymerase
Describe DNA viruses
Have positive and negative strand (double stranded) and negative strand must be transcribed into mRNA
What are the two types of capsids?
Icosahedral symmetry capsids
Helical symmetry capsids
Only this type of virus (nucleic acid) makes helical symmetry capsids
RNA
Viruses with membranes formed from the host cell’s glycoproteins
Enveloped
Viruses without glycoprotein membranes
Naked
What is the acronym used to remember DNA viruses? And the viruses?
HHHAPPPy
Herpes
Hepadna
Adeno
Papova
Parvo
Pox
Describe most DNA viruses
Double stranded icosahedral
DNA viruses with envelopes
Herpes
Hepadna
Px
Three naked DNA viruses
Papova
Adeno
Parvo
Description for most RNA viruses
Single stranded
Enveloped
Helical capsid symmetry
DNA or RNA virus- toga
RNA
DNA or RNA virus- corona
RNA
DNA or RNA virus- retro
RNA
DNA or RNA virus- picorna
RNA
DNA or RNA virus- herpes
DNA
DNA or RNA virus- calci
RNA
DNA or RNA virus- reo
RNA
DNA or RNA virus- hepadna
DNA
DNA or RNA virus- adeno
DNA
DNA or RNA virus- flavi
RNA
DNA or RNA virus- papova
DNA
DNA or RNA virus- orthomyxo
RNA
DNA or RNA virus- paramyxo
RNA
DNA or RNA virus- rhabdo
RNA
DNA or RNA virus- parvo
DNA
DNA or RNA virus- pox
DNA
DNA or RNA virus- bunya
RNA
DNA or RNA virus- arena
RNA
DNA or RNA virus- filo
RNA
What 3 RNA viruses are nonenveloped?
Picorna
Calici
Reoviridae
What 3 RNA viruses are nonenveloped?
Picorna
Calici
Reoviridae
Only double stranded RNA virus
Reovirus
Acronym for positive rna
The calcified Pico spilled flavorful Corona on his retro toga
Calici
Pico
Flavi
Corona
Retro
Toga
Acronym for negative RNA viruses
Old Pete’s Rabid dog Filo fights Paul Bunyon in the Arena
Orthomyxo
Paramyxo
Rhabdo
Filo
Bunya
Arenaviridae
Viral replication steps
1) adsorption and penetration
2) uncoating of virus
3) synthesis and assembly of viral products
4) release of visions from host cell
What are the 4 host cell outcomes of viral infection?
1) death
2) transformation
3) latent infection
4) chronic slow infection
What important virus is in the orthomyxoviridae family?
Influenza virus
What important viruses are in the paramyxoviridae family?
- Parainfluenza virus
- respiratory syncytial virus
- Metapneumovirus
- Mumps virus
5? Measles (rubeola) virus
Main disease manifestations of parainfluenza and rsv in children
Bronchitis
Viral pneumonia
Croul
Main disease manifestations of parainfluenza and rsv in adults
Cold / flu
Diseases caused by metapneumovirus.
Who is at highest risk?
- uri / pro
Young children and older adults
Classic clinical symptoms of mumps
Parotitis
Testicular inflammation
Classic clinical manifestation measles
Prodrome
Koplik’s spots
Rash
Encephalitis
Symptoms flu
High fever
Chills
Headache
Malaise
Myalgias (muscle pain)
Dry cough
Sore throat
Rhinorrhea
What type of flu causes pandemic influenza?
Influenza A virus
Clinical manifestation with pandemic influenza
-primary pneumonia
- weakens immune system for secondary bacterial pneumonia / otitis media
Staph aureus
Haemophilus influenzae
Strep pneumo
What are the two types of glycoproteins on influenza virus?
Hemagglutinin
Neuraminidase
Purpose of hemagglutinin
Adsorption by fusing to sialic acid
Purpose of neuraminidase
Cleaves cell mucin barrier
What are the three types of influenza?
A
B
C
What animals can be infected by influenza A
Humans, other mammals (swine), birds
What is the reservoir for influenza B and influenza C
Humans
Small changes due to mutations that occur during viral replication
Antigenic drift
How long does it usually take the flu symptoms to resolve?
3-7 days
What type of influenza can antigenic shift occur in
Influenza A
When there is a complete change in HA, NA, or both. Occurs when 2 influenza types (usually animal + human) coinfect the same cell and RNA segment mispackaged into another virus
Antigenic shift
What type of antigenic change is responsible for seasonal epidemics
Antigenic drift
What type of antigenic change is responsible for pandemics
Antigenic shift
Dx for influenza
- Viral culture
- Antigen detection
- RNA detection via PCR
- Serological- 4 fold increase over 2 weeks
How flu vaccines are made
Grown in chick embryos and inactivated and purified, choose 3-4 strains
Who should receive the vaccine
All persons six months or older
Immunocompromised
HCP
What is cold adapted influenza vaccine trivalent (CAIV-T)
Live, attenuated vax nasal spray for 2-49 years
Which influenza drugs are becoming less effective due to resistance?
Adamantanes (amantadine and rimantadine)
Antivirals effective against all strains of influenza, decrease duration of infection and likelihood of developing secondary bacterial infection if given within 48 hours of symptom onset
Neurominidase inhibitors (zanamivir and oseltamivir)
What is a prophylactic drug given after exposure to influenza?
Neurominidase inhibitors (ie zanamivir or oseltamivir)
Clinical signs H5N1
2-4 day incubation
Normal flu-like symptoms
Pneumonia with diffuse, patchy infiltrates progresses to acute respiratory distress syndrome (ARDS)
Mortality rate H5N1
50 percent
Basic description paramyxoviridae
Negative stranded RNA
HA and NA same protein spike
Fusion protein
Syncytial cells, where fusion protein causes host cell’s to fuse together
Multinucleated giant cells
Who do paramyxoviridae viruses impact?
Pediatric
Where do paramyxoviridae adsorb and replicate?;
Upper respiratory tract
All paramyxoviridae viruses can disseminate and cause ….
Veremia
What family is parainfluenza virus in?
Paramyoxviridae
Parainfluenza virus that infects larynx and upper resp tract in children. Causes airways to narrow
Croup
Typical symptoms croup (parainfluenza virus);
Stridor (wheezing)
Barking cough
Paramyxoviridae virus that has fusion protein that causes giant multinucleated cells and lacks HA and NA proteins. Causes resp infection
Respiratory syncytial virus
Number 1 cause of pneumonia in young children, esp infants less than 6 months
RSV
Season for RSV
Winter/ spring
Monoclonal antibody for RSV
Palivizumab
Paramyxoviridae isolated in 3001, and determined to be the second most common cause of lower resp infection in young kids
Metapneumovirus
Ages for RSV and metapneumovirus
RSV- under 6 months
Metapneumovirus- 1 year old
Season for metapneumovirus
Winter/ early spring
Symptoms of metapneumovirus
Bronchiolitis
Croup (20%)
Pneumonia (<10%)
Incubation period for mumps
About 3 weeks
Family of mumps
Paramyxoviridae
Pathogenesis of mumps
Replicates in upper respiratory tract and regional lymph nodes, spread via blood to other organs
Most common symptoms of mumps
Parotitis
Orchitis
Vaccine for mumps
Live attenuated, mmr
Another name for measles
Rubeola
Family of measles
Parmyxoviridae
Transmission of measles
Airborne or direct contact with nasopharyngeal secretions
First phase of measles
Prodrome
Incubation period for measles
Approx 10 days
How long does the prodrome last?
3-4 days
How long do koplik spots last?
1-2 days
How long does the measles rash last
6 days
Symptoms measles prodrome
Conjunctivitis, photophobia
Rhinitis, cough
High fever
Malaise
Describe koplik spots
Develop 1-2 days before rash of measles, small red lesions with blue white centers in the mouth
What does the rash of measles look like?
-Red, flat or slightly bumpy (maculopapular)
-Descending - forehead to face neck and torso, feet by day 3
- disappears in order it appears
Complications of measles
Pneumonia
Eye damage
Myocarditis
Encephalitis (10%)
Subacute sclerosing panencephalitis (SSPE)
Pregnant women - spontaneous abortion
Prevention measles
MMR vax
RNA hepatitis viruses
1) hepatitis A virus
2) hepatitis C virus
3) hepatitis D virus
4) hepatitis E virus
5) hepatitis G virus
What is the one DNA hepatitis virus called?
Hepatitis B virus
Hepatitis transmitted via the fecal oral route
Hepatitis A and hepatitis E
Which types of hepatitis are transmitted by blood?
Hepatitis B, hepatitis C, and hepatitis D
Sudden onset of viral hepatitis with a mild to severe coarse followed by complete resolution
Acute viral hepatitis
Hepatitis following a prolonged course of active disease or silent asymptomatic infection
Chronic viral hepatitis
What are the liver function enzymes?
Aspartate aminotransferase (AST)
Alanine aminotransferase (ALT)
Gamma-glutamyl transpeptidase (GGT)
Alkaline phosphatase
Symptoms acute viral hepatitis
2 weeks after symptoms onset:
Jaundice
Painful, enlarged liver
Elevated liver enzymes on blood
What two liver enzymes typically spike with acute viral hepatitis?
ALT and AST
Describe basics of Hepatitis A Virus
Naked
icosahedral capsid
+ Single strand RNA
Family picornaviridae
Fecal oral
Incubation period Hepatitis A
15-40 days
Test for acute HAV infection
Serology- IgM
Reservoir for HBV
All human body fluids (semen, urine, saliva, blood, breast milk)
Basic description HBV
Enveloped
Icosahedral capsule
Double stranded DNA
Name for intact HBV virus (DNA polymerase, DNA, proteins, envelope, isocahedral capsule)
Dane particle
Filamentous structures composed of the envelope and some capsid proteins that have disassociated from the intact HBV virion
Hepatitis B surface antigen
If you have this antibody, you are immune to HBV
Hepatitis B surface antigen (anti-HBsAg)
Viral core without HBSaG
Hepatitis B core antigen (HBcAg)
Are anti-HBcAg protective against HB
No
HBV marker for active disease and a highly infectious state
HBeAg
Describe HBV transmission
Parenteral
Most contagious hepatitis virus
HBV
Can Hepatitis A be chronic?
No, only acute
Disease states of HBV
1) acute hepatitis B
2) Fulminant hepatitis B (severe)
3) chronic hepatitis B
4) co-infection with Hepatitis delta virus
Forms of chronic HBV
1) asymptomatic carrier
2) chronic persistent hepatitis
3) chronic active hepatitis (acute state without normal recover last over 6 months)
What actually damages the liver in HBV?
Immune system, so immunocompromised tend to be asymptomatic