Transcription Flashcards

1
Q

Nucleotide consists of

A

Base + phosphate + ribose

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2
Q

Nucleoside

A

Base + ribose

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3
Q

RNA

A

Contains an -OH on the carbon ring

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4
Q

DNA

A

Contains H+ on the carbon ring

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5
Q

Most common site of phosphorylation of nucleotide

A

Hydroxyl group at 5’ carbon of the ribose (phophodiester bond)

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6
Q

Type of bonds that allow DNA to dissociate

A

H+

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7
Q

Nucleotides can exist in what forms

A

Mono, di, tri

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8
Q

Ribose sugar linked covalently (N-glycosidic bond) to what area of purine and pyramidine

A

N-9 (purine)

N-1 (pyramidine)

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9
Q

Type of bond of ribose to nucleoside and nucleotide

A

Covalent

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10
Q

Purine bases

A

Guanine / adenine

pure as gold

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11
Q

Pyrimidine (bases)

A

Cytosine / Uricil / Thymine

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12
Q

Precursor to DNA and RNA

A

Nucleotides

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13
Q

Universal currency of energy

A

ATP

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14
Q

Forms portion of several coenzymes

A

Nucleotides (coenzymes - NAD, NADP, FAD, CoA, SAM)

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15
Q

Act as second messengers in signal transduction (cAMP, cGMP)

A

Nucleotides

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16
Q

Controls enzymatic reactions and serves as activated intermediates

A

Nucleotides

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17
Q

Polymer of deoxyribonucleotides linked through phosphodiester bonds

A

DNA

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18
Q

Polymer of nucleoside monophosphates

A

DNA

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19
Q

Polarity of DNA results from

A

asymmetry of nucleoside monophosphate monomers

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20
Q

Two helical polynucleotide chains are coiled around a common axis to form right-handed double helix (definition developed by)

A

Watson and Crick

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21
Q

DNA chains run parallel or antiparallel

A

Antiparallel

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22
Q

DNA bases located

A

Inside helix

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23
Q

DNA phosphate and deoxyribose are located

A

Outside of helix

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24
Q

DNA chains held together by

A

H+ bonds

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25
Distance between bases
3.4 (0.34 nm)
26
Adenine + Thymine (# and type of bonds)
2, H+ bonds
27
Guanine + Cytosine
3, H+ bonds
28
A/G and C/T nearly always equal to 1
Chargaff
29
Regulatory proteins exist where on DNA
Major and minor grooves on surface of double helix
30
Precise sequence of bases carrier
Genetic information
31
Charge of DNA
Negative
32
Negative charge of DNA due to
Phosphate groups
33
3 dominant forms of DNA
B- Z- A-
34
Dominant form of DNA
B-DNA
35
B- and A- DNA (right or left)
Right-handed helix
36
Z-DNA (left or right handed)
Left-handed
37
Proteins are made directly from DNA (true or false)
False
38
Complementary copy of DNA
mRNA
39
Translated on a ribosome
mRNA
40
Used to direct protein synthesis
Genetic code
41
Chromatin
DNA and associated proteins
42
DNA packed in highly organized structural units
Chromosomes
43
Majority of protein in chromatin
Histones
44
Histones are rich in what amino acids
Arginine and lysine (positively charged)
45
Nucleosome is made up of
2 loops of DNA + 8 histones
46
DNA protein complexes are termed
Chromatin
47
Non-histones proteins in chromatin are mainly
Enzymes
48
Nucleosomes are packed together and form a
Solenoid
49
Types of RNA
``` mRNA (code) rRNA (structure) tRNA (transfer) snRNA +very small RNA - miRNA (inhibit) and siRNA (degrade) ```
50
code for proteins
mRNA
51
form the basic structure of the ribosome and catalyze protein synthesis
rRNAs
52
central to protein synthesis as adaptors between mRNA and AA
tRNAs
53
function in a variety of nuclear processes, splice pre-mRNA
snRNAs (small nuclear)
54
modify snoRNAs and snRNAs
scaRNAs (small cajals)
55
process and chemically modify rRNAs
snoRNAs
56
regulate gene expression typically by blocking translation of selective mRNAs (INHIBITION)
miRNAs
57
Turn off gene expression by directing DEGRADATION of selective mRNAs and the establishment of compact chromatin structures
siRNAs
58
Central Dogma
DNA > RNA > protein
59
mRNA, rRNA, tRNA are all involved in protein synthesis - which one is responsible for directing synthesis of proteins
mRNA
60
How are all RNAs catalyzed/synthesized from DNA templates
DNA-dependent RNA polymerases
61
Process of RNA synthesis
Transcription
62
Template for RNA synthesis
DNA
63
Three stages of transcription
Initiation Elongation Termination
64
Difference in RNA polymerases between eukaryotic and prokaryotic cells
Prokaryotic - 1 (single) | Eukaryotic - I, II, III