Test#3 Notes Questions Flashcards

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1
Q

What do structural genes do?

A

encode proteins

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2
Q

What do regulatory genes do?

A

encode proteins that interact with other sequences and affect the transcription and translation of these sequences

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3
Q

What are regulatory elements?

A

DNA sequences that are not transcribed but play a role in regulating other nucleotide sequences

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4
Q

What is the role of gene regulation in bacteria?

A

maintains internal flexibility, turning genes on and off in response to environmental changes

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5
Q

What does gene regulation do in multicellular eukaryotic organisms?

A

brings about cell differentiation

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6
Q

What is constitutive expression?

A

continuously expressed under normal conditions (some transcription is always happening)

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7
Q

What is positive control?

A

stimulate gene expression

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8
Q

What is negative control?

A

inhibits gene expression

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9
Q

What does the structure of an operon consist of?

A

promotor + additional sequences that control transcription (operator) + structural genes

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10
Q

What is a regulator gene?

A

DNA sequence- encoding products that affect the operon function but are not part of the operon (Lac I)

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11
Q

What is an operon?

A

a single transcriptional unit that includes a series of structural genes, promoter, and operator

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12
Q

What are the three genes on the lac operon?

A

Lac z, lac y, lac a

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13
Q

What protein does lac z encode?

A

b-galactosidase

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14
Q

What protein does lac y encode?

A

permease

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15
Q

What protein does lac a encode?

A

acetylase

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16
Q

What stopes the lac operon from being transcribed?

A

the repressor protein being to the operator sequence which makes it so that RNA polymerase cannot bind to the promotor

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17
Q

What encodes for the repressor protein?

A

the regulatory gene lac I

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18
Q

How is the lac operon turned on when lactose is present?

A

Allolactose binds to the repressor making it inactive because repressor cannot bind to operator

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19
Q

What is a negative repressible operon?

A

The control at the operator site is negative. But such transcription is usually on and need to be turned off. so the transcription is repressible.

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20
Q

What is the regulatory protein called in positive transcriptional control?

A

activator

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21
Q

Negative =

A

repressor

22
Q

positive =

A

activator

23
Q

inducible =

A

transcription off

24
Q

repressible =

A

transcription on

25
Q

What type of operon is the lac operon?

A

negative inducible

26
Q

What is the inducer for the lac operon?

A

allolactose

27
Q

What is the lac repressor encoding gene?

A

lac I

28
Q

What is the lac operon promotor?

A

lac P

29
Q

What is the lac operon, operon operator?

A

lac O

30
Q

What is an allosteric binder?

A

It binds somewhere else other than the active site

31
Q

What does permease do?

A

makes membrane permeable for lactose

32
Q

What does b-galac do?

A

breaks it down to either glucose or allolactose

33
Q

Example of an inducer?

A

allolactose (allows transcription to occur)

34
Q

What happens in the presence of allolactose?

A

the lac repressor cannot bind to the operator

35
Q

What is a partial diploid?

A

full bacterial chromosome + an extra piece of DNA on F plasmid

36
Q

Structural gene mutations

A

affect the structure of the enzymes but not the regulations of their synthesis

37
Q

(-) =

A

loss of function

38
Q

(+)=

A

normal

39
Q

What do structural gene mutations do?

A

affect the structure of the enzymes but not the regulation of their synthesis

40
Q

Effect of regulator-gene mutations?

A

lacl- leads to constitutive transcription of three structural genes

41
Q

What is catabolite repression?

A

using glucose when available and repressing the metabolite of other sugars (positive control mechanism)

42
Q

Function of cAMP?

A

the concentration of cAMP is inversely proportional to the level of available glucose

43
Q

Function of CAP?

A

The catabolite activator protein (CAP) binds to the promotor of the lac operon and stimulates transcription.

44
Q

Effects of I- mutation?

A
  • total loss of function
  • recessive mutation
  • still have good copy from other gene, still works/ looks normal
45
Q

What are the results and conclusion of the mutant operator (O^c)

A
  • one lac operon non repressible; mutation is constitutive dominant
  • change of sequence of operon
  • transcription is never repressed so it is always on
46
Q

What are the results and conclusion of the mutant repressor gene (I^s)

A
  • allolactose can’t bind, no transcription/ uninducible
  • cis + trans dominant
47
Q

I d- mutation?

A
  • repressor can’t bind DNA
  • always transcription
  • dominant negative
48
Q

What type is the tryp operon?

A

negative repressible
- on when tryp is low
- off when tryp is high

49
Q

What regulates/ changes Eukaryotic chromatin structure?

A
  • Histone modification
  • DNA methylation
  • Chromatin remodeling
50
Q

Effects of histone modification?

A
  • addition of acetyl groups to histone proteins, acetylation of histones loosens DNA and increases transcription
51
Q

What are the condition for the lac operon to be off?

A

high glucose, low lactose, low cAMP low LAP

52
Q

What are the condition for the lac operon to be on?

A

high lactose, low glucose, high cAMP, high CAP