slide 8 Flashcards

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1
Q

Metabolism

A

The Energy of Life

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2
Q

The living cell

A

• Is a miniature factory where thousands of
reactions occur
• Converts energy in many ways

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3
Q

Metabolism

A
  • Includes all of an organism’s chemical reactions
  • Is a network of pathways
  • Arises from interactions between molecules
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4
Q

An organism’s metabolism transforms

A

matter and

energy subject to the laws of thermodynamics

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5
Q

A metabolic pathway has many steps
These begin with a specific molecule or
molecules and end with a specific product

A

Each step is facilitated by a specific catalyst

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6
Q

A catalyst

A
is a substance that
accelerates the rate of a
chemical reaction without
affecting the products of the
reaction and without itself
being altered or consumed by
the reaction.
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7
Q

enzymes.

A

The catalysts in living
organisms are proteins called
enzymes

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8
Q

Metabolic pathways balance supply and demand.

A

• Speed up reactions when not enough product is present
• Slow down reactions when a surplus of product is present
• Products in one set of reactions are the starting molecules
in other sets of reactions.

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9
Q

Catabolic pathways

A

• Break complex molecules into simpler ones
• Release energy
e.g. hydrolysis
reactions

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10
Q

Anabolic pathways

A

• Build complicated molecules from simpler ones
• Consume energy
e.g. dehydration
reactions

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11
Q

Energy

A

– Is the capacity to cause change

– Exists in various forms, some can perform work

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12
Q

Kinetic energy

A

– Is the energy associated with motion

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13
Q

Potential energy

A

– Is stored in the location of matter
– Includes chemical energy stored in molecular
structure (chemical bonds)

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14
Q

There are many forms of energy
(light, heat, chemical, electrical,
etc.) but only two states:

A

Potential energy is stored energy

Kinetic energy is the energy
present in the motion of a body

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15
Q

1st law of thermodynamics

A
  • energy is neither
    created or destroyed, but can be transformed
    from one form to another
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16
Q

2nd law of thermodynamics -

A

physical systems
tend to proceed to a state of greater disorder
(entropy)

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17
Q

Energy enters a biological system

A

is spent, transformed, and lost as heat.

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18
Q

Gibbs free energy is the energy available for

work in a system at uniform temperature.

A

Josiah Willard Gibbs

1839-1903

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19
Q

The free-energy change of a reaction tells us

whether the reaction occurs spontaneously.

A

During a spontaneous change free energy

decreases and the stability of a system increases

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20
Q

Spontaneous change:

A
- The free energy of the system
decreases
- The system becomes more stable
- The released free energy can be
harnessed to do work
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21
Q

exergonic reactions.

A

The majority of the reactions in living cells release

free energy and are called exergonic reactions.

22
Q

endergonic reactions.

A

Many important reactions in cells, however,
require the addition of energy and are called
endergonic reactions

23
Q

equilibrium,

A

Reactions in a closed system eventually reach

equilibrium, and can do no more work.

24
Q

Equilibrium and Metabolism

A
Cells in our body
experience a constant flow
of materials in and out,
preventing metabolic
pathways from reaching
equilibrium
25
Q

Cellular metabolism

A

is an open, multi-step process

26
Q

Entropy (disorder)

A

is decreased in living organisms
by metabolic processes, but this results in increased
entropy of the larger system.

27
Q

Entropy (disorder)

A

is decreased in living organisms
by metabolic processes, but this results in increased
entropy of the larger system.

28
Q

• Just because a reaction is exergonic, and therefore

occurs spontaneously, does not mean it occurs rapidly.

A

• Even exergonic reactions require destabilization of

chemical bonds through the input of activation energy

29
Q

Enzymes catalyze

A

reactions

by lowering the EA barrier

30
Q

enzyme’s substrate.

A

The reactant that an enzyme acts on is

called the enzyme’s substrate.

31
Q

enzyme-substrate complex

A

The enzyme binds to its substrate, forming

an enzyme-substrate complex.

32
Q

The active site

A

is the region on the enzyme

where the substrate binds

33
Q

The active site can lower an EA barrier by

A
  • Orienting substrates correctly
  • Straining substrate bonds
  • Providing a favorable microenvironment
  • Covalently bonding to the substrate
34
Q

Each enzyme has an optimal temperature

in which it can function properly

A

Each enzyme has an optimal pH

in which it can function properly

35
Q

Cofactors

A

are nonprotein enzyme helpers

36
Q

Cofactors may be

A

inorganic (such as a metal

in ionic form) or organic

37
Q

coenzyme

A

An organic cofactor is called a coenzyme

Coenzymes include vitamins.

38
Q

Competitive inhibitors

A

bind to the active site of

an enzyme, competing with the substrate.

39
Q

Noncompetitive inhibitors

A

bind to another part
of an enzyme, causing the enzyme to change
shape and making the active site less effective.

40
Q

Allosteric regulation

A

occurs when a regulatory
molecule binds to a protein at one site and affects
the protein’s function at another site.

41
Q

Metabolism can be regulated by switching

A

on or
off the genes that encode specific enzymes or by
regulating the activity of enzymes

42
Q

Cooperativity

A

is a form of allosteric regulation

that can amplify enzyme activity

43
Q

Cooperativity

A

is a form of allosteric regulation

that can amplify enzyme activity

44
Q

One substrate molecule primes

A

an enzyme to act

on additional substrate molecules more readily.

45
Q

Allosteric regulators are attractive drug
candidates for enzyme regulation because of
their specificity

A

Inhibition of proteolytic enzymes called caspases
may help management of inappropriate
inflammatory responses

46
Q

In feedback inhibition,

A

the end product of a

metabolic pathway shuts down the pathway

47
Q

Feedback inhibition prevents a cell from wasting

A

chemical resources by synthesizing more product

than is needed

48
Q

Location of Enzymes

A

Structures within the cell help bring

order to metabolic pathways.

49
Q

Some enzymes act as structural

components of membranes

A

In eukaryotic cells, some enzymes

reside in specific organelles.

50
Q

Changes (mutations) in genes lead to changes

in amino acid composition of an enzyme

A

Altered amino acids in enzymes may alter their

substrate specificity

51
Q

Lab experiments have been successful in

altering the function

A

of β–galactosidase from

the bacterium E. coli.