Recombinant DNA Flashcards
a DNA that has
an Exogenous DNA or Gene attached with a vector DNA
R-DNA
- Polymerase Chain Reaction (PCR) 2. DNA Sequencing
R-DNA techniques
What is cDNA?
A newly synthesized DNA which is complementary to the template, is called as ‘cDNA’
Polymerase chain reaction (PCR)
- DNA synthesis done repeatedly for multiple times
2. Amplify a target DNA in large amount
Why we need PCR?
- Super fast and super sensitive technique
- Any region of a target DNA can be selected
- Amount of target DNA is increased/amplified
Requirements for PCR?
- Template DNA
- Two primers: targeting both strands small single-stranded DNA molecules
- Substrate: dNTP (dATP, dCTP, dGTP, dTTP)
- Enzyme Taq DNA polymerase
Template is not visible
Because very little amount
PCR steps
1- denaturation 94*C
2-annealing
3- extension 74*C
Anealing depends on
The primer size
Annealing temperature is selected based on the
melting temperature (Tm) of a primer
Melting temperature
Tm = 2 (Number of A and T) + 4 (Number of C&G) oC
Annealing temperature must be
5o C less than the Tm
Requirements for DNA sequencing (Sanger’s )
DNA / gene
Primer complementary to only one strand
Substrate dNTP (dCTP, dGTP, dTTP, dATP)
Terminators ddNTP (ddCTP, ddGTP, ddTTP, ddATP) Taq DNA polymerase
DNA sequencing is accomplished in two steps
- Sequencing reaction to generate sequence
Base selective termination of DNA synthesis - Electrophoresis to obtain sequence
Separation of terminated fragments by capillary electrophoresis
Therefore amplification is not a geometric progression?
The product in this case does not act as template in the next cycle