Proteins Flashcards

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1
Q

What is an amino acid

A

Monomer which makes up proteins. Central carbon atom bonded to carboxylic acid, amino group, hydrogen atom and R group

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2
Q

What is an amine group

A

The -NH2 group of amino acid

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3
Q

What is carboxyl group

A

The -COOH group of an amino acid

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4
Q

What is disulphide bridge?

A

Bond formed between sulphur atoms in R groups of amino acids

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5
Q

What is a hydrogen bond?

A

Chemical bond form between the positive charge on a hydrogen atom and the negative charge on another atom of adjacent molecule often between negative oxygen and positive hydrogen

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6
Q

What is ionic bond?

A

Bond between a positive iron, which has lost an electron and a negative iron which is gained electrons

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7
Q

What is a peptide bond?

A

Type of bond that is formed between two amino acids

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8
Q

What is a polypeptide?

A

Many immuno acids joined together by peptide bonds

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9
Q

What is the primary protein structure?

A

Sequence of amino acids that make up the polypeptides of a protein

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10
Q

What is a protein?

A

Polymer which is made up of amino acids linked by peptide bonds may also contain prosthetic groups as part of its return quaternary structure

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11
Q

What is the quaternary protein structure?

A

Number of polypeptide chains linked together and sometimes associated with non-protein groups to form protein

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12
Q

What is R group?

A

Each of the 20 immuno acids have a different R group determines the bonding that the amino acid can carry out

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13
Q

What is secondary protein structure?

A

The way in which the chain of amino acid of the polypeptides of, the protein is folded

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14
Q

What is the tertiary protein structure?

A

Folding of a whole polypeptide chain in a precise way, as determined by the immuno acid of which it is composed

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15
Q

Amino acids info

A

Monomers that make up protein. Only 20 amino acids present in all forms and the different combinations of these determines the shape and structure of each protein as well as its properties.

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16
Q

What happens when two amino acids join?

A

They join via a condensation reaction, and a peptide bond is formed, easing a water molecule. Two amino acids joined together is known as a dipeptide.

17
Q

What is a polypeptide

A

More than two amino acids joined together

18
Q

How are dipeptides and polypeptides broken down?

A

Through hydrolysis

19
Q

What are the different levels of protein structure?

A
  1. Primary
  2. Secondary
  3. Tertiary.
  4. Query.
20
Q

Primary structure, description

A

Number and sequence of amino acids in the polypeptide chain. Can determine the 3-D shape or tertiary structure and can therefore affect the shape of the active sites and enzymes.

21
Q

Secondary structure, description

A

Hydrogen bonds form between amino acids in the chain. This causes it to coil into an alpha helix or fold into beta pleated sheets. The many hydrogen bonds make these structures stable. Most channel proteins are made of alpha Helices. 

22
Q

Tertiary structure, description

A

This is a 3-D shape of the polypeptide chain. It creates a specific shape due to the sequence of amino acids in the chain is a hydrogen bonds, ionic bonds and disulphide bridges (covalent bonds) form between R groups. A change to the sequence of amino acids would affect the secondary and tertiary structure of these bonds would form in different places. All enzymes antibodies and some hormones have tertiary structure

23
Q

Quaternary structure, description

A

If proteins are made of more than one polypeptide chain, then they are jointed together to create quaternary structure. Antibodies and haemoglobin are examples of these other non-protein groups may also be associated e.g. the haem group in haemoglobin 

24
Q

What are fibrous proteins?

A

Long strands of polypeptide chains that have crossed linkage due to hydrogen bonds. They are insoluble. Little Or no tertiary structure. Limited number of amino acids with the sequence usually being highly repetitive 

25
Q

Examples of fibrous proteins

A

Collagen, elastin and keratin

26
Q

Collagen info

A

Three polypeptide chains has lots of covalent bonds, long, strong, flexible and insoluble chains lie close together

27
Q

Elastin info

A

Insoluble, flexible, stretches, long, found in alveoli, blood vessels and skin

28
Q

Keratin info

A

Long insoluble found in hair ,nails, claws, hooves and skin

29
Q

What are globular proteins?

A

Spherical proteins that are somewhat water, soluble, and have a compact structure, one of the common protein types.

30
Q

Pepsin info

A

Mainly beta sheets with Alpha helixes has two disulphide bridges. Tertiary structure, forms, active sites as its protease enzyme.

31
Q

Insulin info

A

Transportable as it soluble. No beta sheets. Compact. Tertiary structure. hydrophobic core, hydrophilic exterior, lowers blood glucose

32
Q

Haemoglobin info

A

Mostly alpha helixes. Compact. For polypeptide chains 2 alpha 2 beta.

33
Q

3 globular protein

A

Pepsin, insulin and haemoglobin