PRELIM 01 - Introduction to Medicinal Chemistry Flashcards
Is the applied science that is focused on the design of new chemical entities (NCEs) and their optimization and development as useful drug molecules
Medicinal chemistry
The __________ century was the age of innovation and chemistry
Early 19th
__________ is isolated from opium by Serturner
Morphine
Morphine is isolated from __________ by Serturner
Opium
Morphine is isolated from opium by __________
Serturner
__________ is isolated from ipecacuanha by Pelletier
Emetine
Emetine is isolated from __________ by Pelletier
Ipecacuanha
Emetine is isolated from ipecacuanha by __________
Pelletier
__________ is isolated from aniline
Penacetin
Penacetin is isolated from __________
Aniline
___________ is used for dropsy by William Withering
Digitalis
Digitalis is used for __________ by William Withering
Dropsy
Digitalis is used for dropsy by __________
William Withering
__________ is isolated by Nieman
Cocaine
Cocaine is isolated by __________
Nieman
____________ is isolated from the calabar bean
Physostigmine
Physostigmine is isolated from the __________
Calabar bean
__________ was a German scientist who proposed the receptor concept, which states that chemotherapeutic agents possess haptophoric and toxophilic groups
Paul Ehrlich
3 stages of drug discovery process
Drug discovery, Drug design, Drug development
Includes target ID and validation, and lead discovery (Stages of drug discovery process)
Stage 1 (Drug discovery)
Drugs that are used for orphan diseases (rare diseases with little to no funding for treatments)
Orphan drugs
Protein that is known to be the primary target of penicillin in Staphylococcus aureus
Penicillin-binding-protein (PBP)
Assay that determines activity of the compound at the target and other receptors
Bioassay
Done in an artificial environment, as in a test tube or culture media (Types of bioassay)
In vitro
Done in the living body, referring to tests conducted in living animals (Types of bioassay)
In vivo
Usually refers to doing the test on a tissue taken from a living organism (Types of bioassay)
Ex vivo
Test for Salmonella typhimurium
Ames test
Ames test is an example of __________ bioassay
In vitro
Test for the ability to inhibit potassium ion channels in the heart leading to fibrillation and heart failure
hERG test
hERG test is an example of __________ bioassay
In vitro
Acute toxicity tests on mice is an example of __________ bioassay
In vivo
Meaning of SOSA
Selective Optimization of Side Activities
__________ is used for isolation and purification
Chromatography
__________ and __________ is used for structure determination (XN)
X-ray crystallography, NMR spectroscopy
Screening that involves the automated testing of large numbers of compounds versus a large number of targets
High-thoughput screening
Spectroscopy that is used as a test for drug receptor binding
NMR spectroscopy
Pharmaceutical companies have prepared thousands of compounds using __________
Synthetic banks
_____________ uses a computer to design a perfectly-fitting ligand
Computer-assisted drug design
Drug that inhibits the action of aldehyde dehydrogenase in alcohol metabolism; was discovered through serendipity
Disulfram (Antabuse)
Drug used to treat erectile dysfunction; was discovered while doing research for a heart drug
Sildenafil (Viagra)
__________ is derived from the Yew tree (SN: Taxus brevifolia) (Fam: Taxaceae)
Paclitaxel
Paclitaxel is derived from the __________ (Fam: Taxaceae)
Yew tree (Taxus brevifolia)
__________ is derived from Qinghao (SN: Artemisia annua L.) (Fam: Asteraceae)
Artemisinin
Artemisinin is derived from __________ (Fam: Asteraceae)
Qinghao (Artemisia annua L.)
____________ is derived from poppy (SN: Papaver somniferum L.) (Fam: Papaveraceae)
Morphine
Morphine is derived from __________ (Fam: Papaveraceae)
Poppy (Papaver somniferum L.)
___________ is derived from Penicillium notatum
Penicillin
Penicillin is derived from __________
Penicillium notatum
__________ is a protein that can be found in a Horseshoe crab’s blood (SN: Limulus polyphemus)
Limulus amebocyte lysate (LAL)
LAL is a protein that can be found in the blood of a horseshoe crab, also known as __________
Limulus polyphemus
__________ is derived from Phantasmal poison frog (SN: Epipedobates tricolor)
Epibatidine
Epibatidine is derived from the __________
Phantasmal poison frog (Epipedobates tricolor)
__________ is derived from the Marine cone snail (SN: Conus geographus)
Ziconotide
Ziconotide is derived from the __________
Marine cone snail (Conus geographus)
__________ is derived from the Gila monster (SN: Heloderma suspectum)
Exenatide
Exenatide is derived from the __________
Gila monster (Heloderma suspectum)
__________ is derived from the Brazilian viper (SN: Bothrops jararaca)
Teprotide
Teprotide is derived from the __________
Brazilian viper (Bothrops jararaca)
__________ and __________ is derived from Sulfonamide (TC)
Tolbutamide, Chlorothiazide
Tolbutamide and Chlorothiazide is derived from __________
Sulfonamide
__________ is derived from Warfarin
Tipranavir
Tipranavir is derived from __________
Warfarin
__________ is derived from Epinephrine
Salbutamol
Salbutamol is derived from __________
Epinephrine
__________ is derived from Histamine
Cimetidine
Cimetidine is derived from __________
Histamine
Includes lead optimization (Stages of drug discovery process)
Stage 2 (Drug design)
Meaning of SAR
Structure activity relationships
__________ involves knowing the part/group of the molecule that is important to biological activity
Structure activity relationships (SARs)
__________ are important binding groups which are required for activity
Pharmacophore
Are atoms or groups of atoms which have the same valency and which have chemical or physical similarities (IB)
Isosteres, Bioisosteres
Includes pre-clinical development, clinical development, and drug manufacturing (Stages of drug discovery process)
Stage 3 (Drug development)
Involves 20-100 healthy individuals; studies safety (Phases of clinical development)
Phase I
Involves 100-500 individuals with disease; studies efficacy (Stages of drug discovery process)
Phase II
Involves 1000-5000 individuals; studies both safety and efficacy (Stages of drug discovery process)
Phase III
Includes post approval; studies adverse drug reactions (ADRs) (Stages of drug discovery process)
Phase IV
Ames test is the test for __________
Salmonella typhimurium