Practical 1 Flashcards
what does it mean that microorganisms are ubiquitous
found in any environmental condition
what is a pure culture
culture containing a single unadulterated species
what does survival and continued growth of microorganisms require
nutrients and a favourable growth environment
what is a culture medium
soluble low molecular weight substances (derived from enzymatic degredation of complex nutrients)
what is agar
used for solid media, extract of seaweed, is a complex carbohydrate composed mainly of galactose
why is agar a good solidfying agent
liquid at 100c and solid at 40c
what percent of agar is needed to have a solid media
1.5-1.8 percent
what is the main advantage to using agar slants in test tubes
best for maintaining pure cultures
whats the purpose of agar deep tubes
used for the study of gaseous requirements of microorganisms
what is the purpose of agar plates
large surface areas for the isolation and study of microorganisms
what is sterilization
process of rendering a medium or material free of all forms of life
what is the main function of aseptic technique
maintaining sterile where necessary and avoid external contamination
where can you use broth mediums
only in test tubes, never in petri dishes
what is a way to maintain aseptic technique in mediums
plastic lids in petri plates, metal or plastic caps in test tubes (historically cotton plugs)
how must petri dishes be incubated and why
incubated inverted (larger cap down) to prevent condensation from dripping
what is subculturing
microorganisms being transferred from one vessel to another
what are wire loops made of
inert metals such as nichrome or platinum
what is the function of an incubator
maintains a temperature for the microorganisms that is optimal for their growth
what is the function of a fridge
will slow or stop the growth of most microorganisms to be able to use for example as stock cultures
how do you transfer microorganisms from a tube to a petri plate
flame loop, remove cap, flame neck of tube, collect sample, flame neck of tube, cap, open petri plate, spread sample, lid petri plate, flame loop
what is one of the best ways to get a pure culture from a mixed culture
streak plate
what is a colony
individual macroscopically visible masses of microbial growth on solid medium representing replication of single microorganism
what is a streak plate
essentially a dilution series on solid media
what is colony morphology
visible collection of microorganism cells growing on the surface of solidified media
for agar slants what are the terms for abundance of growth
none, slight, moderate, large
for agar slants what are the terms for optical characteristics
opaque, translucent, transparent
for agar slants what are the form types
filiform, echinulate, beaded, effuse, arborescent, rhizoid
what is filiform growth
continuous threadlike growth with smooth edges
what is echinulate growth
continuous threadlike growth with irregular edges
what is beaded growth
nonconfluent to semiconfluent colonies
what is effuse growth
thin spreading growth
what is arborescent growth
treelike growth
what is rhizoid growth
root like growth
what are the consistencies for agar slants
dry, buttery, mucoid
for agar plates what are the form types
circular, irregular, rhizoid
what are the margin types for agar plates
entire, lobate, undulate, serrate, filamentous
what is entire for agar plates
sharply defined and even
what is lobate for agar plates
marked indentations
what is undulate in agar plates
wavy indentations
what is filamentous in agar plates
threadlike spreading edge
what are the elevation types in agar plates
flat, raised, convex, umbonate
what is umbonate in agar plates
raised with an elevated convex central region
who pretty well invented the microscope
leeuwenhoek
what are the present day microscope magnification capabilities
greater than 250,000X
what are the two basic types of microscopes
light or electron
what are the types of light microscopes
brightfield, darkfield, phase-contrast, fluorescent
what kind of microscope uses uv light
fluorescence
how do electron microscopes work
electron beams and magnets to observe submicroscopic particles
what are the essential features of a brightfield microscope
2 lens system, tungsten light, specimen appears dark against a bright background, no contrast, good for stained slides not for living cells
what are the essential features of a darkfield microscope
condenser system modified so specimen isnt directly illuminated, specimen appears bright on a dark background, can observe living cells better than brightfield
what are the essential features of phase contrast microscope
can observe in unstained state, specimen appears dark against a bright background, light refracts to show structures of organism
what are the essential features of a fluorescent microscope
see organisms tagged with fluorescent dyes, uv light for illumination, used for antigen-antibody interactions, colour on black background
what are the essential features of an electron microscope
magnification up to 1 million x, illuminated by beam of electrons, focusing is done by electromagnets instead of optics, scanning for surface images, transmission for thin filaments
what is the stage of a microscope
fixed platform with opening for light passage, typically mechanical and can be moved horizontally and vertically
what is the abbe condenser
directly under the stage and has two sets of lenses to collect and concentrate light, also contains an iris diaphragm to regulate the amount of light
what is the body tube
above the stage and attached to arm of microscope, houses lens system to magnify specimen, body tube is lowered and raised by the adjustment knobs
how do you manipulate magnification
occular lens and objective lens
what is numerical aperture
function of the diameter of the objective lens in relation to its focal length
the ____ the wavelength the ___ the resolving power
the shorter the wavelength the greater the resolving power
____ wavelengths for ___ resolution
short wavelengths for better resolution
what is resolving power dependent on
refractive index and wavelength
what is the refractive index
bending power of light passing through air from the glass slide to the objective lens
what is the correct setup for koehler illumination
eye and specimen focused, specimen and field stop focused
what is the function of koehler illumination
illuminate specimen on slide, as light passes through specimen it should be parallel and evenly illuminated–its the best image you can get
what does it mean that a substage condenser uses a 2 conjugate plane system
if one is at focus the other is completely defocused but completely parallel
what are the two parts to a conjugate plane system
the first is the light source, aperature stop, objective. the second is field stop, specimen, eyepiece/eye
what is the formula for resolution
wavelength/2*NA (NA is numerical aperature)
what is numerical aperture
measure of light gathering ability of a lens
what is the refractive index of oil
1.5
what is the refractive index of air
1
what is numerical aperture of a dry lens
1
what is numerical aperture of oil lens
1+
what is the longest wave length
red
what is the shortest wavelength
violet
what is a stain
an organic compound containing benzene ring plus a chromophore and an auxochrome group
what is the function of chromophore
brings colour
whats the function of auxophore
binds the colour of chromophore to fibers or tissues
are acidic stains anionic or cationic
anionic
what are acidic stains used for
gram negative bacteria
what are basic stains used for
gram positive bacteria
whats an example of an acidic stain
picric acid, nigrosine, congo red
whats an example of a basic stain
crystal violet, methylene blue, safranin
what are the two basic staining techniques
simple or differential
why is it bad to have too much bacteria on a slide
diminishes the amount of light that is able to pass through
why is heat fixation required
helps anchor bacteria to slide, and kills bacteria
what is streptococcus
chain of cocci
what is staphlococcus
unorganized cluster of cocci
what is sarcinia
cube of cocci
how do you do a positive stain
put basic stain on slide for 30 seconds, rise excess dye off
how do you do a negative stain
no heat fixation needed, nigrosin at one end of slide, bacteria in nigrosin drop, spread dot to other end of slide with another slide at a 45 degree angle
how many chemical reagents are needed for differential staining
4 chemical reagents
what is the strength of differential staining
you can differentiate gram negative and gram positive bacteria on the same slide
how do you do a differential stain
start with heat fixed slide, apply basic stain (crystal violet), wash, grams iodine, wash, alcohol, wash, other basic stain, wash
what is the function of grams iodine
kills bacteria and increases cells affinity for a stain