Population Genetics Flashcards

1
Q

What is a population

A

A group of interbreeding individuals of the same species living in the same space at the same time

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2
Q

What is a locus (plural loci)

A

A position in the genome where there might be one or more alleles in the population

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3
Q

What is an allele

A

A variant at a locus or gene

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4
Q

What is a genotype

A

The combination of alleles carried by an individual at a particular locus

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5
Q

What is heterozygosity

A

The frequency of hetrozygotes in a population- a measure of variability of a locus

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6
Q

What are the hardy Weinberg equations

A

p+q=1

p^2+pq+q^2=1

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7
Q

What is the hardy Weinberg equilibrium used to calculate

A

To calculate the genotype frequency from allele frequency

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8
Q

When is the population in hardy Weinberg equilibrium?

A

When mating is random,
There is no population structure
No selection
Population size is infinite so there is no interbreeding

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9
Q

What is heterozygosity

A

A measure of variation of a population at a gene

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10
Q

What is the equation to measure a change in heterozygosity?

A

Delta H= -1/2N x H

Where H is heterozygosity and N is population size

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11
Q

Genetic drift equation

A

Delta H = 2u(1-H)

Where u is the mutation rate

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12
Q

Mutation drift balance equation

A

H = 4Nu/1+4Nu
U is mutation rate
H is heterozygosity
N is population size

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13
Q

What are the three types of selection

A

Artificial selection
Natural selection
Sexual selection

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14
Q

What is artificial selection

A

Human domestication of animals eg dogs and cattle

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15
Q

What is natural selection

A

The main agent of evolutionary change based on the concept that variation in reproductive success permits the most adaptive variants to survive

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16
Q

What is sexual selection

A

Allele frequency change driven by preference to he opposite sex

17
Q

What is positive selection

A

The allele that is advantageous in there environment which increases allele frequency to complete homozygosity

18
Q

What can be used to measure SNPs

A

Genotyping chips

19
Q

What can linkage disequilibrium be between?

A

1 and 0

Where 1 is perfect disequilibrium and 0 is complete equilibrium

20
Q

What is quantitative genetics

A

Discrete alleles and one gene to complex traits with many genes

21
Q

What is population genetics

A

A model for real life
Description of genetic structure of populations
Describe how evolutionary forces change the genetic structure
Can relate genotype to phenotype