PCR Flashcards

1
Q

What does PCR stand for?

A

Polymerase chain reaction

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2
Q

Who invented PCR and when?

A

Kary Mullis 1985

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3
Q

How many bases are oligonucleotides?

A

18 bases

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4
Q

What 5 things are needed

A
Temple DNA
DNA polymerase
Oligonucleotide primer 
dNTPs
Buffer
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5
Q

Where do primers bind to DNA?

A

At the 5’ end, the primer binds

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6
Q

What are amplicons?

A

Amplified DNA

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7
Q

What is the name of the DNA products?

A

dsDNA products

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8
Q

Name the 3 steps in PCR

A

1) Denature template DNA to ssDNA heat
2) Lower Temp to allow Annealing of primers
3) Extension of the primer by DNA polymerase

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9
Q

What are the temperatures of the steps in PCR?

A

95
55
72

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10
Q

Each cycle what happens to the DNA

A

dsDNA doubles

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11
Q

What bacteria is used and why?

A

Thermus Aquaticus
optimum temp of 72C
Relatively stable at 94C

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12
Q

How can we tell gene changes in gel electrophoresis?

A

Further up or down the page indicates deletion or insertion

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13
Q

What information is gained from a Prenatal test?

A

Detects mutated gene

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14
Q

What information is gained from a Prenatal screen?

A

Embryo tested across population for an increased risk of condition

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15
Q

What information is gained from a new-born screen?

A

Population wide testing for several treatable inborn errors of metabolism

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16
Q

What information is gained from diagnostic test?

A

Confirms diagnosis based on symptoms

17
Q

What information is gained from a Predisposition test?

A

Detects presence of mutated gene

18
Q

What information is gained from a predictive test?

A

Detects highly penetrative mutation with early onset.

19
Q

Define Epigenetics

A

process that induced long term stable changes in gene activity without a change in gene activity without a change in the gene sequence

20
Q

Name 3 types of epigenetics

A

DNA methylation
Histone modification
Non coding RNAs

21
Q

What causes sporadic breast cancer?

A

Altered DNA methylation of BRACA 1. Hypermethylation