Mutations and Variations Flashcards

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1
Q

Define a mutation

A

A change in a DNA base sequence caused by mutagens

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2
Q

What are the 3 types of point mutation?

A

Substitution, insertion and deletion

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3
Q

What type of mutation are insertion and deletion, and what does this mean?

A

Frameshift
- Changes every codon after the mutation , so likely to affect the tertiary structure

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4
Q

What is a codon?

A

Sequence of 3 bases that codes for an amino acid

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5
Q

Why might a substitution have no effect, and what is the name for this no effect?

A

The genetic code is degenerate, meaning some amino acids have multiple codons that code for them
- Neutral/silent

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6
Q

What are two possible effects of a mutation?

A

Beneficial - Enhanced function of protein, can lead to natural selection
Damaging - Malfunctioning protein made

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7
Q

What is a nonsense and a missense mutation?

A

Nonsense - Premature ‘stop’ codon
Missense - Substitution results in different amino acid being coded for

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8
Q

What are chromosomal mutations and what are types of it?

A

Mutations where large sections of chromosomes are altered
Deletion - deleting part of a chromosome
Duplication - section of DNA doubled
Inversion - section of a chromosome turns upside down/inverts
Translocation - Section of a chromosome moves from one chromosome to another

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9
Q

What are the 4 levels of control in transcriptional control of gene expression?

A

Transcriptional - Turning genes on/off
Post transcriptional - Editing mRNA
Translational - Turning translation on/off
Post translational - Editing protein

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10
Q

Explain the transcriptional stage in eukaryotes when transcription can’t happen

A

Histone modification for chromatin remodelling
Heterochromatin is tightly wound DNA around histones in cell division
This means the gene is inaccessible to the RNA polymerase so transcription can’t happen

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11
Q

Explain the transcriptional stage where transcription can occur

A

Heterochromatin is changed to euchromatin, where the DNA is loosely wrapped around histones in interphase, when protein synthesis can happen
Gene is accessible to RNA polymerase

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12
Q

How does heterochromatin change to euchromatin?

A

Acetylation-Phosphorylation - adding an acetyl or phosphate group
This decreases the positive charge of histones
DNA is negatively charged, so they will attract less to histones if the histones are less positive

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13
Q

How does euchromatin change to heterochromatin?

A

Methylation - adding a methyl group
This increases the hydrophobic nature of histones so they bind more tightly to each other

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14
Q

What is the transcriptional level of control in prokaryotes and why is it called this?

A

Lac(tose) operon
Because prokaryotes would usually, and prefer to use glucose in respiration, but if there is a lack of glucose, prokaryotes can activate lac operon to break down lactose instead

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15
Q

What is an operon?

A

A group of genes controlled by the same regulatory mechanism and expressed at the same time

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16
Q

What are structural genes and what are they in lac operon?

A

Proteins not involved in DNA regulation
laz Z, Y and A in lac operon, which code for B galactose, lactose permease and lactose transacteylase, which are all enzymes that metabolise lactose

17
Q

What are regulatory genes and in lac operon?

A

Proteins that are involved in DNA regulation
lacI in lac operon codes for the repressor protein, which stops/represses the transcription of the structural genes in the absence of lactose

18
Q

What are the two other sections of the lac operon?

A

Operator - DNA sequence where repressor binds to
Promoter - DNA sequence where RNA polymerase binds to

19
Q

Explain what happens at the stages at lac operon when glucose is present (no lactose)

A
  • LacI is expressed to make the repressor protein which binds to the operator
  • Due to do it’s size and shape, it blocks the RNA polymerase binding site on the promoter, so transcription of the structural genes cannot occur
20
Q

Explain what happens at the stages at lac operon when lactose is present (no glucose)

A
  • Lactose binds to the repressor protein causing a change in it’s shape, so it can’t bind to the operator anymore and is released
  • This unblocks the binding site on the promoter, so RNA polymerase can bind to it to transcribe the three structural genes
21
Q

How can transcription be made more efficient?

A
  • cAMP receptor protein (CRP) binds with cyclic AMP (cAMP) and upregulates the activity of RNA polymerase
  • this upregulated RNA polymerase then goes on to transcribe the structural genes to make B-galactosidase, lactose permease and lactose transacetylase
  • These free enzymes metabolise lactose to release energy
22
Q

What are introns and exons?

A

Introns - DNA sequences that do not code for proteins
Exons - DNA sequences that do code for proteins

23
Q

What is RNA splicing?

A
  • First step of post transcriptional control
  • Removes introns from pre-mRNA
24
Q

What happens after RNA splicing to protect the exons from damage during transportation?

A
  • Add cap (modified nucleotide) to 5 prime end
  • Add tail of adenine to 3 prime end
  • This stabilises mRNA and prevents degradation
  • Mature mRNA for the ribosome
25
Q

What is the point of mRNA editing after mRNA is protected?

A

Different versions of mRNA to make different proteins of different functions

26
Q

What is a homeobox gene? Give feature

A
  • Regulatory genes (180 base pairs)
  • Code for homeodomain (part of a protein)
  • Control body development
  • Highly conserved
  • Regulate mitosis
27
Q

What are Hox genes?

A

The homeobox genes found in animals