MICROBIOLOGY LAB AUTOMATION Flashcards
TAT
5-7 days
Principle
Identify and differentiate bacteria of based on biochemical tests
It provides a standardized, miniaturized version of existing identification techniques, which were complicated to perform and difficult to read.
The plastic strip holds mini-test chambers containing dehydrated media having chemically defined compositions for each test.
They usually detect enzymatic activity, mostly related to fermentation of carbohydrates pr catabolism of proteins or amino acids by the inoculated organisms
ANALYTICAL PROFILE INDEX (API)
Bacterial suspensions used to rehydrate each of the wells and the strips are incubated.
During incubation metabolism produces color changes that are either spontaneous or revealed by the addition of reagents.
All positive and negative test results are compiled to obtain a profile number, which is then compared with profile numbers in mercial codebook or logbook (or online) for the determination and identification of the bacterial species.
ANALYTICAL PROFILE INDEX (API)
VITEK
Uses______ methodology for organism identification and_____ method for susceptibility testing.
fluorogenic
turbidimetric
Uses fluorogenic methodology for organism identification and turbidimetric method for susceptibility testing.
VITEK
VITEK
• Can provide ID/AST results in as little as ____ hours.
6 to 8
VITEK
identifation
Susceptibility
Fluorogenic
Turbidimetric
2 types of VITEK
Vitek2
Vitek2 compact
MALDI
MALDI(MATRIX ASSISTED LASER DESORPTION/IONIZATION
TOF
TIME OF FLIGHT)
It is a powerful analytical technique used in mass spectrometry to identify and analyze biomolecules such as proteins, peptides, lipids, and other macromolecules
MALDI-TOF (MATRIX ASSISTED LASER DESORPTION/IONIZATION-TIME OF FLIGHT)
MALDI-TOF mass spectrometry operates in two primary stages.
MALDI
TOF
A sample is mxed with a chemical matrix that absorbs laser energy
A laser pulse irradiates the sample matrix mixture, causing the matrix to vaporize and carry the
In this process, the _______are ionized (usually by gaining or losing a proton) without ignificant fragmentation
analyte molecules
MALDI TOF
Functions:
:Converts the biomolecules into ions for mass analysis
: Separates ions based on their mass-to-charge ratio (m/z) using the TOF analyzer.
: Measures the ion signals to create a mass spectrum, which provic detailed information about the molecular weights of the components.
Ionization
Mass separation
Detection
Identification of bacteria, fungi, and other microorganisms by comparing their unique protein profiles.
Clinical diagnostics and pathogen detection.
MALDI-TOF
MALDI TOF
identication and characterization of proteins and peptides.
Post-translational modification analysis.
Proteomics