Microbiology--Clinical Bacteria Flashcards
Staphylococci identification: novobiocin sensitivities
on “staph” retreat, there was NO StRES: saprophyticus–resistant; epidermidis–sensitive
Strep identification: optochin and bacitracin
OVRPS: optochin–viridans is resistant; pneumoniae is sensitive
B-BRAS: bacitration–group B is resistant; group A is sensitive
green ring around colonies on blood agar
alpha hemolytic, Strep pneumoniae or viridans
clear area of hemolysis on blood agar
B-hemolytic bacteria: staph aureus, strep pyogenes, strep agalactiae, listeria monocytogenes
how does MRSA gain resistance to methicillin and nafcillin
altered penicillin binding protein
infects prosthetic devices and IV catheters by biofilm
staph epidermidis
second most common cause of uncomplicated UTI in women
staph saprophyticus
“rusty sputum” sepsis in sickle cell anemia and splenectomy
Strep pneumoniae: MOPS are Most OPtochin Sensitive: most common cause of meningitis, otitis media (in kids), pneumonia, sinusitis; gram + diplococci, IgA protease
strep species that is associated with dental caries and bacterial endocarditis on damaged valves
Strep viridans: mutans-cavities; sanguinis–bacterial endocarditis; optochin resistant, bile does not lyse, catalase -
pharyngitis, scarlet fever, rheumatic fever, glomerulonephritis
Strep pyogenes (group A strep); M protein, ASO titer
bacitracin resistant, B hemolytic, colonizes vagina–affects babies
Strep agalactiae (group B strep); colonies at 35-37 weeks in pregnant women, if positive, give prophylactic penicillin; hippurate test +
gram+, catalase -, gamma/alpha hemolytic, growth in bile and hypertonic salt
Enterococcus (group D strep) E faecalis, faecium
bacteria that colonizes the gut, can cause subacute endocarditis in colon cancer patients
Strep bovis
gram positive rods with metachromatic blue/red granules
Corynebacterium diphtheriae; black colonies on cystine tellurite agar, beta prophage (with diptheria toxin), Elek test for toxin; toxoid vaccine available
Spore forming gram + bacteria found in soil:
bacillus anthracis, clostridium perfringens, C tetani
other spore formers: B cereus, C botulinum, Coxiella burnetii
gram positive, spore forming, obligate anaerobic bacteria
clostridium spp
bad bottles of food and honey
Clostridium botulinum (preformed heat labile botulinum toxin)
boil-like lesion–ulcer with black eschar that is painless and necrotic
cutaneous bacillus anthracis (gram positive spore forming rod); only bacteria with polypeptide D glutamate capsule
flu like symptoms that progress rapidly to fever, pulmonary hemorrhage, mediastinitis, and shock
pulmonary anthrax
reheated rice/pasta
bacillus cereus–spore forming gram+ that causes nausea and vomiting within 5 hrs of ingestion via preformed toxin cereulide; watery nonbloody diarrhea and GI Pain within 8-18 hrs
ingestion of unpasteurized dairy products/deli meats
Listeria monocytogenes: facultative intracellular microbe; rocket tails via actin that allow for cell penetration; only G+ organism to produce LPS
oral facial abscesses that drain through sinus tracts, form yellow sulfur granules
actinomyces (gram +, anaerobic, not acid fast)
pulmonary infection in immunocompromised, cutaneous infection after trauma in competent
Nocardia (gram+, aerobic, weakly acid fast)
How does mycobacterium avoid immune clearance?
cord factor in virulent strains inhibits macrophage maturation and induces release of TNF-alpha; sulfatides (surface glycolipids) inhibit phagolysosomal fusion
“glove and stocking” loss of sensation and cannot be grown in vitro. armadillo reservoir in US
Mycobacterium leprae: lepromatous form–low cell mediated immunity with a humoral Th2 response; tuberculoid form–high cell mediated immunity with largely Th1-type mediated response
strong and weak lactose fermenting enteric bacteria
Lactose is KEE; Test with macConKEE’S agar; klebsiella/e coli/enterobacter are fast fermenters; citrobacter/serratia are weak fermenters
neisseria gonorrhea vs meningitidis?
both are gram negative diplococci; both ferment glucose and produce IgA protease; MeninGococci ferment maltose and glucose; Gonococcal ferment glucose only; gonorrhea often intracellular within neutrophils
epiglottitis, meningitis, otitis media, pneumonia in children
HiB, culture on chocolate agar requires V (NAD+) and X (hematin); gram- coccobacillary rod; vaccine has type B polysaccharide conjugated to protein
severe pneumonia,fever, GI and CNS symptoms
Legionnaires disease; legionella; gram negative rod; detect with urine antigen; use silver stain, grow on charcoal yeast extract with iron and cysteine; labs show HYPOnatremia
associated with wound and burn infections
pseudomonas aeruginosa: gram negative rode, non lactose fermenting, oxidase +; pyocyanin (blue/green pigment); grape like odor; endotoxin and exotoxin (inactivates EF2)
What are e coli virulence factors?
fimbriae: cystitis/pyelonephritis; K capsule: pneumonia, neonatal meningitis; LPS endotoxin: septic shock
microbe invades intestinal mucosa causing necrosis and inflammation. dysentery.
EIEC
produces heat labile and heat stabile enterotoxins. No inflammation or invasion
ETEC
adheres to apical surface, flattens villu, prevents absorption
EPEC–diarrhea in children
HUS e coli
EHEC–does not ferment sorbitol (distinguishes from other E coli)
Salmonella vs Shigella: flagella
only Salmonella have flagella
Salmonella vs Shigella: dissemination
Salmonella: hematogenously; Shigella: cell to cell, no hematogenous
Salmonella vs Shigella: reservoirs
Salmonella: many; Shigella: only humans and primates
Salmonella vs Shigella: hydrogen sulfide
only salmonella
Salmonella vs Shigella: antibiotics
Salmonella: prolong course; Shigella: shorten course
Salmonella vs Shigella: immune response
Salmonella: invades mucosa, monocytic response; Shigella: invades mucosa, neutrophil response
Salmonella vs Shigella: diarrhea bloody/nonbloody
Salmonella: sometimes bloody; Shigella: bloody
Rose spots on abdomen, fever, headache, diarrhea
Salmonella typhi–typhoid fever, can remain in gallbladder and cause carrier state
major cause of bloody diarrhea esp in children
Campylobacter jejuni; fecal oral transmission through foods; grows at 42 C; common antecedent to GBS and reactive arthritis
rice water diarrhea via enterotoxin
vibrio cholerae–toxin permanently activates Gs; grows in alkaline media; oral rehydration
transmitted from pet feces; contaminated milk or pork–mimics Crohns or appendicitis
Yersinia enterocolitica–causes mesenteric adenitis
curved gram - rode that is catalase, oxidase, and urease +
helicobacter pylori
flu like symptoms, jaundice, photophobia with conjunctival erythema w/out exudate
Leptospira interrogans–spirochete; prevalent among surfers and in tropics; water contaminated w/ animal urine
natural reservoir is the mouse
Lyme disease–big spirochete, facial nerve palsy, arthritis, cardiac AV block, erythema migrans
congenital syphilis
saber shins, saddle nose, CN 8 deafness, hutchinson teeth, mulberry molars; to prevent treat mother early in pregnancy–transmission occurs after 1st trimester
false positives of VDRL test
VDRL: viruses (mono, hepatitis); drugs; rheumatic fever; lupus and leprosy
Ixodes ticks (deer and mice)
anaplasmosis: infection in RBS by rickettsia spp; increased HR, hematuria, use Giemsa stain; lyme disease
Cat scratch
bartonella spp: bacillary angiomatosis. lymphadenopathy
Louse
borrelia recurrentis: recurrent fever; variable surface antigens; rickettsia proweseki (endemic typhoid)
unpasteurized dairy
brucella spp: brucellosis; undulant fever
puppies, livestock (fecal oral, ingestion of undercooked meat)
Campylobacter: bloody diarrh
Parrots, birds
chlamydophila psittaci: psittacosis-severe pneumonia, typhoid mimic
aerosols of cattle/sheep amniotic fever
coxiella burnetii: q fever–mild flu like illness–chronically can cause endocarditis/hepatitis
lone star ticks
ehrlichiosis: obligate intracellular bacteria that infect/kill WBCs; supress TNF-alpha
ticks, rabbits, deer fly
tularemia
animal urine
leptospirosis
animal bite, cats, dogs
pasteurella multocida
dermacentor ticks
rickettsia rickettsii: RMSF
Fleas
rickettsia typhi–endemic typhus
Fleas (rats/prairie dogs are reservoirs)
yersinia pestis–plague
rash starting at wrists/ankles and spreadin to trunk/palms/soles
RMSF
differential for palm and sole rash:
CARS: Cocksackievirus A, RMSF, 2 syphilis
rash starting centrally and spreads out, sparing palms and wrists
Typhus
monocytes with morulae (berry like inclusions) in cytoplasm
ehrlichiosis–tick vector
granulocytes with morulae in cytoplasm
anaplasmosis
2 forms of chlamydia
Elementary body (small/dense) that is Enfections/Enters cell via Endocytosis and transforms into Reticulate body that Replicates by fission and reorganizes into Elementary body
what is unusual about chlamydia cell walls?
lack muramic acid
high titer of cold agglutinins IgM
Mycoplasma pneumoniae: IgM can aggregate or lyse RBCs, no cell wall, membrane has sterols for stabilityq