Microbiology 7-Evolution and emergence of new viruses Flashcards

1
Q

What is zoonosis

A

Crossing of an animal pathogen into humans

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2
Q

What stops zoonosis

A

Host range barrier

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3
Q

What is the quasispecies

A

All the mutations of a single virus within a single person

Can be bottlenecked on transmisssion

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4
Q

Why do viruses change rapidly under new selection pressures

A

Replicate Fast

Replicate in Large Numbers

High Mutation Rate

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5
Q

Describe how HIV drug resistance is prevented

A

There are drugs which target different parts of the HIV life cycle

If you give the patient a protease inhibitor, a single nucleotide switch may make the protease inhibitor ineffective

So you must give a combination of antiviral drugs because in that case, for a virus to be resistant, it would need 5 or so simultaneous mutations which is unlikely.

Error rate is roughly 1 per 10,000 nucleotides and as each genome is roughly 10,000 nucleotides long, each HIV genome is likely to be slightly different

Therefore, monotherapy would almost certainly result in proliferation of a resistant population of HIV

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6
Q

What is antigenic drift

A

antigens gradually change over a period of time due to pressure exerted by antibodies

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7
Q

What makes vaccinating agaisnt rhinovirus so hard

A

don’t show antigenic drift but there are so many of them circulating at the same time so you are likely to catch many of them in your lifetime.

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8
Q

How do new viruses emerge (5)

A

Zoonosis

Genetic Variation

Increased Exposure - travel or world population

Increased Exposure - spread of vector

New Discoveries

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9
Q

Global influences of emerging infections (7)

A

Environmental modifications/demographics

World population

Climate change

Travel

Farming practices; monocultures

Immunosuppressed humans

Medical progress

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10
Q

What are arbovirus?

A

A class of viruses transmitted to humans by arthropods such as mosquitoes and ticks.

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11
Q

Describe the emergence of west nile virus in NYC

A

Belongs to Japanese encephalitis group of flaviviruses - cause disease by going to the brain

1999 - West Nile Virus was found in New York - bad year for mosquitoes in NY

Some elderly people succumbed to a brain disease - crows and birds at the zoo became ill

RT-PCR showed that the virus originated from Israel

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12
Q

Why is dengue worse the more times you get it

A

First time you get it isnt that bad

Second time you get infected by a different SEROTYPE the antibodies from the first time make you more sick

You get Dengue Haemorrhagic fever

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13
Q

What is the Antibody Dependent Enhancement of the Infection

A

If infected by a different viral serotype - the antibodies bind loosely to the antigens but don’t block it

Then the antibodies can bind to Fc receptors on immune cells thus carrying the virus into immune cells

This leads to a cytokine storm and dengue haemorrhagic fever

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14
Q

What is zika virus and why is the virus dangerous now

A

An arbovirus

Mutation- new tropism so gained neurovirulence

Interfering with expression of MCPH1

can cross the placenta to give children microcephaly

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15
Q

What is chikinguyna

A

arbovirus

Gives muscle and joint pains

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16
Q

How is SARS(Severe Acute Respiratory Syndrome) transmitted and why was it easy to contain

A

It was transmitted via respiratory droplets

Patients did not become contagious until quite late into the infection once they had become symptomatic - you can see who has SARS and isolate them

17
Q

What kind of virus is the SARS virus,

what is the human receptor

Which animal did it emerge from

What is special about the spike protein

A

Coronavirus; Large (30kb) positive sense RNA genome.

Receptor is human ACE-2 protein.

Bats

S protein is highly plastic and can adapt to different receptors overcoming host range barriers.

18
Q

What is the zoonosis of MERS

What is its receptor

A

Camel

Receptor DPP4 in lungs

19
Q

How does recombination happen

A

If two virus replicate in the same cell can contain combinations of genes from both

20
Q

What is antigenic SHIFT

A

If the human virus (which can replicate easily in humans)

recombines with a virus from an animal the virus will have new antigens (from the animal virus)