microbial nutrition Flashcards
CO₂ as the primary biosynthetic carbon source
Autotrophs:
Organic molecules from other organisms
Heterotrophs:
Light as energy source
Phototrophs:
Oxidation of organic or inorganic compounds
Chemotrophs:
Reduced inorganic molecules
Lithotrophs:
Organic molecules
Organotrophs:
Energy: Light
Hydrogen/Electrons: Inorganic H/e⁻ donor
Carbon: CO₂
Examples: Algae, Purple and Green Sulfur Bacteria, Cyanobacteria
Photolithotrophic Autotrophy (Photolithoautotrophy)
Energy: Light
Hydrogen/Electrons: Organic H/e⁻ donor
Carbon: Organic carbon source (or CO₂)
Examples: Purple Nonsulfur Bacteria, Green Nonsulfur Bacteria
Photoorganotrophic Heterotrophy (Photoorganoheterotrophy)
Energy: Chemical (inorganic)
Hydrogen/Electrons: Inorganic H/e⁻ donor
Carbon: CO₂
Examples: Sulfur-Oxidizing Bacteria, Hydrogen Bacteria, Nitrifying Bacteria, Iron-Oxidizing Bacteria
Chemolithotrophic Autotrophy (Chemolithoautotrophy)
Energy: Chemical (organic)
Hydrogen/Electrons: Organic H/e⁻ donor
Carbon: Organic carbon source
Examples: Protozoa, Fungi, Nonphotosynthetic Bacteria (including pathogens)
Chemoorganotrophic Heterotrophy (Chemoorganoheterotrophy)
Carboxylation (CO₂ fixation), one-carbon metabolism
biotin
Molecular rearrangements
One-carbon metabolism—carries methyl groups
Cyanocobalamin (B₁₂)
One-carbon metabolism Enterococcus faecalis (B), Tetrahymena pyriformis (P)
folic acid
Transfer of acyl groups Lactobacillus casei (B), Tetrahymena spp. (P)
lipoic acid
Precursor of coenzyme A
—carries acyl groups (pyruvate oxidation, fatty acid metabolism) Proteus morganii (B), Hanseniaspora spp. (F), Paramecium spp. (P)
panthothenic acid
Amino acid metabolism
pyridoxine (B₆)
Precursor of NAD and NADP—carry electrons and hydrogen atoms
niacin
Precursor of FAD and FMN—carry electrons or hydrogen atoms
riboflavin (B₂)
Aldehyde group transfer (pyruvate decarboxylation, α-keto acid oxidation)
thiamine (B₁)
Organic compounds required because they
are essential cell components or precursors of such components
and cannot be synthesized by the organism are called
growth factors.
are small organic molecules that
usually make up all or part of enzyme cofactors
and only very small amounts sustain growth.
Vitamins
must contain all nutrients the microorganism requires
culture medium
media in which all components are known
defined/synthetic media
contain some ingredients of unknown chemical composition
complex media
support growth of many microorganisms
general purpose media
A basic medium that supports the growth of a wide range of microorganisms.
nutrient agar
: A general-purpose medium that is commonly used for the cultivation of bacteria.
Tryptic soy agar (TSA)
: A nutrient-rich medium that is often used for the cultivation of recombinant strains of E. coli.
Luria-Bertani (LB) agar
: A medium that contains sheep’s blood and is used to identify and differentiate bacteria based on their hemolytic properties.
Blood agar
: A medium that is used for the isolation and cultivation of fungi.
Sabouraud agar
A nutrient-rich medium that is used for the cultivation of a wide range of microorganisms.
Brain Heart Infusion (BHI) agar:
A selective and differential medium that is used to isolate and differentiate gram-negative bacteria.
MacConkey agar:
A medium that is used for the cultivation of a wide range of microorganisms.
Columbia agar:
A medium that is used for antibiotic susceptibility testing.
Mueller Hinton agar:
A medium that is used for the cultivation of environmental bacteria.
Reasoner’s 2A agar (R2A):
A basic medium that is used for the cultivation of a wide range of microorganisms.
Nutrient broth:
A simple medium that is used for the detection of motility and the growth of non-fastidious organisms.
Peptone water:
A medium that is used for the cultivation of anaerobic bacteria.
Robertson’s cooked meat medium: