Lecture 6 Flashcards

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1
Q

exocytosis

A

process where newly synthesized proteins are expressed and transported to destinations
-needs proteins synthesis to start

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2
Q

ribosomes

A

2 subunits-small and large

  • in cytoplasm
  • mRNA in nucleus needs to get into cytosol
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3
Q

Shine delgarno sequence

A

prokaryotes have these sequences.

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4
Q

proteins that require modifications or that are destined to be membrane bound integral proteins go to
otherwise, the making of proteins starts in the

A

ER

cytosol

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5
Q

(ER signal sequence) SRP

signal recognition particle

A
  • binds to ribosome and signal peptide
  • It has sequence of amino acids that says go to this place, and its called a signal sequence.
  • directs transport of ribosome to ER
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6
Q

small and large subunit

A

floats around separately. mRNA will be recognized by small subunit, then large subunit will add on top then translation, starts creating protein

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7
Q

in mRNA

UTR

A

untranslated region and there is 5’ cap in eukaryotes. have a start somewhere internal. start site called: Kozak sequence (in euk*)

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8
Q

large subunit composed of what

A

E:eject; P: polymerize; A:add.

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9
Q

problems w GLUT5

A

doesnt transport glucose, it is a fructose transporter.

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10
Q

SRP comes in,

A

ribosome pauses translation. When its bound, and drags to ER. SRP binds to SRP receptor. once they interact, ribosome docks on sec 61. Allow proteins to cross membrane. SRP and SRP receptor displaced and recycled.

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11
Q

as protein gets made it is jammed into

A

lumen (space) of ER

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12
Q

Sec61

A

protein translocator or translocon
allows peptides to cross from cytosol to ER lumen
allows release of peptides in plane of ER

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13
Q

signal sequence means

A

N terminus is in

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14
Q

New N terminus is the green loop. Cleaved by protein complex called

A

signal peptidase. Signal peptide gets cleaved off.

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15
Q

if it has 12 transmembrane domains,

A

it has 12 internal signal sequences

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16
Q

always starts with

A

in

17
Q

importance of sugar modifications

A
  • aid in folding and transport

- recognized by lectins and play role in cell cell adhesion

18
Q

lectins

A

used to bind sugars

19
Q

adding block of sugars bound to sugars of

A

dolichol. adds this sugar to N-linked asparagine.

20
Q

dolichol only does

A

n linked

21
Q

bind calnexin and calreticulin

A

lectins that keep misfolded proteins from grouping (chaperones)
-80-90% of proteins don’t get made correctly

22
Q

signal for retention

A

KDEL OR KKXX. X-any amino acid.

23
Q

smooth er

A

making lipids. phospholipids made outside of smooth er

24
Q

membrane biosynthesis

A

scrambalase- ensures equal distribution of phospholipids on both sides of ER.

25
Q

golgi

A

-stack of membrane structures called cisternae (cis medial trans)

26
Q

MTOC

A

microtubular organizing center

27
Q

localization of golgi

A

often perinuclear (peri=near), near ER exit sites