lecture 16- quantitative genetics Flashcards
polygenic inheritance
Polygenic inheritance refers to the inheritance of a trait governed by more than one genes. Generally, three or more genes govern the inheritance of polygenic traits. Multiple independent genes have an additive or similar effect on a single quantitative trait.
continuous traits
influenced by
1) alleles at many loci (polygenic) and/or
2) environmental effects
many genes contribute to single phenotype
quantitative trait loci
heritability
the proportion of phenotypic variance that can be attributed to genetics
*if same genetics but different environment, lower heritability (increase in environmental variance)
***specific to particular population in particular environment
backcross
Backcrossing is a crossing of a hybrid with one of its parents or an individual genetically similar to its parent, to achieve offspring with a genetic identity closer to that of the parent. It is used in horticulture, animal breeding, and production of gene knockout organisms
intercross
A mating between two members of the F1 generation or between two animals that are heterozygous at the same locus
A cross between two identically hybrid individuals (A/a X A/a).
heritability
the proportion of total phenotypic variation that is due to genetic differences
mean (x with bar on top)
average measure which provides information about the center of the distribution
variance (s^2)
indicates the variability of a group of measurements, or how spread out the distribution is
(the great the variance, the wider the spread in the distribution)
phenotypic variance (v with subscript p)
can be measured in a population and then partitioned into two components: genetic and environmental
phenotypic variance (v with subscript p)
can be measured in a population and then partitioned into two components: genetic and environmental
broad sense heritability (h^2)
proportion of phenotypic variance that is due to genetic variance
(i.e.) how much of the variation is genetic vs how much is environmental?
broad sense heritability
Broad-sense heritability, defined as H2 = VG/VP, captures the proportion of phenotypic variation due to genetic values that may include effects due to dominance and epistasis.
narrow sense heritability
Narrow-sense heritability is defined as the fraction of phenotypic variance that can be attributed to variation in the additive effects of genes ( V A ) : h 2 = V A / V P ⋅ . Narrow-sense heritability is always less than or equal to broad-sense heritability.
monozygotic twins
single egg breaks in two
100% same genes, so same phenotype
dizygotic twins
two eggs fertilized at same times
50% same genes
correlation coefficient (r)
measures the strength of association between two variables, as in the degree of scatter in the points from the line (NOT slope)
higher r, stronger correlation
how do we calculate heritability in twin studies
broad sense heritability can be estimated by taking twice the difference of the correlation coefficients for a quantitative traits in monozygotic vs dizygotic twins
H^2= 2(r for monozygotic- r for dizygotic)
interaction variance
arises when the effect of a genotype depends on the specific environment it was found
(such as man and woman having same genotype for height but man is taller because of testosterone and hormones affecting gene expression)
norm of reaction
the pattern of phenotypic expression of a single genotype across multiple environments
components of phenotypic variance
genetic variance (vg)
environmental variance (ve)
genetic environment interaction variance (vge)
**a GE interaction doesnt require the lines to cross, they just have to have different slopes
dominance effects
when interactions between alleles complicate things
another way to find little h^2 besides v additive/v phenotype?
R/S
Selection differential/response to selection
limitations of heritability