Lab Diagnosis Flashcards
Lab Diagnosis of Enterobacteriaceae
Grows readily on media
Blood agar for normally sterile material
Selective media for specimens with lots of normal flora like feces sputum, urine (MacConkey agar, Eosin Methylene Blue agar)
Biochemical ID (many commercial systems available to ID genus and species except salmonella) api 20E
Enterotube
MacConkey Agar
Contains bile salts crystal violet
Lactose
Peptone
pH indicator
Eosin Methylene Blue Agar
Has eosin
Methylene Blue
Lactose peptone
Lab Diagnosis of Vibrio Cholerae
Survives poorly in an acidic or dry environment so has to be collected and cultured fast
Grows on variety of simple media (MacConkey Agar or TCBS-Thiosulfate Citrate Bile Salts Sucrose)
V. cholerae grows without salt (most virbos are halophilic)
Gram -
Campylobacter Lab Diagnosis
Feces refrigerated and processed in a few hours (avoid oxygen exposure) Selective filtration (can pass through 0.45 filter)
Microscopically darting motility in fresh stools and cultured organisms appear small, curved rods with gull wing shape
Culture growth at microaerophilic atmosphere supplemented with CO2 at an elevated temp 42C and grown on selective media (supplement with blood/charcoal to remove oxygen radicals and antibiotics “vancomycin” to inhibit contaminating microbes)
Helicobacter pylori Lab Diagnosis
Direct microscopy of gastric biopsy
Antigen detection (h. pylori in stool)
Culture on media with blood, hemin or charcoal (protects for oxygen free radicals)
Serology (detects presence of anti H. pylori antibodies in serum)
Urease test
Neisseria Meningitidis Lab Diagnosis
Bacteria abundant in CSF and blood
Spinal tap/blood smear and gram stain
Culture on selective (Modified Thayer-Martin-contains Vancomycin, Colistin, Nystatin, and Trimethoprim) and non-selective media (chocolate agar)
Oxidase test
Commercial serological test to detect capsular antigen (can give false pos)
Neisseria Gonorrhoeae Lab Diagnosis
Gram stain of discharge (Small gram - diplococci in presence of PMN)
Culture
Susceptible to drying and cooling (use pre-warmed selective media or nonselective media)
Some strains inhibited by vancomycin, fatty acids, and trace metals in protein hydrolysates and agar found in nonselective media
Positive ID of Gonorrhoeae
Presumptive test
Oxidase +
Catalase +
Gram - diplococci
Commensals found in oropharynx can be confused with N. gonorrhoeae
Norcardia Lab Diagnosis
Microscopy is sensitive and specific (branching partially acid-fast organisms)
Culture on selective media such as buffered charcoal yeast extract (BCYE) takes up to a week
Genus levels ID can be made microscopically
Species level requires genomic analysis
M. Tuberculosis Lab Diagnosis
Radiographic evidence
Tuberculin skin test detects exposure to bacteria (PPD inoculated intradermal layer, read 48h later, exposed person mounts immune response, rxn read by measuring induration)
Microscopically detects acid fast bacteria in samples
Culture (Lowenstein-Jensen or Middlebrook agar) takes 3+ weeks
Tuberculoid Leprosy
Few erythematous hypigmented plaques with flat centers and raised demarcated borders
Sensory loss and nerve enlargement
Few or no acid fast bailli observed
Low infectivity
Reactive to lepromin
Lepromatous Leprosy
Many erythematous macules, papules, or nodules
Extensive tissue destruction
Foam macrophages with few lymphocytes
High infectivity
Non-reactive to lepromin