kinetics2 Flashcards
Initial assumptions about michaelis-menton
- k-2 is irrelevant bc theres no product
- rate limiting step is k2 Vo = k2[ES]
- [S] is constant
- [ES] is constant steady state assumption
Vo =
Vmax[S]/(Km + [S])
1/Vo =
Km/Vmax[S] + 1/Vmax
Km =
(k2 + k-1)/k1
when k2
then Km = k-1/k1 which is the dissociation constant Kd so km would be a measure of the affinity of an enzyme for it’s substrate
Kcat
turnover number, number of product molecules per second (gives us an idea of how quickly the enzyme is actually going)
catalase
One of the fastest enzymes, very impressive turnover number, breaks down hydrogen peroxide(from oxygen), if you look at the reaction being catalyzed it gives you a clue as to why the kcat is so high
when [S]
Vo = kcat/Km * [Et][S]
kcat/Km is
a second order rate constant for the interaction of [Et] and [S]
The upper limit for Kcat/km
imposed by how fast E and S can diffuse together
(10^8M-1S-1)
an enzyme close to this limit is diffusion controlled and has reached catalytic perfection
(catalytic efficiency can’t be greater than this or it would break the diffusion control limit
arrhenius equation
Kcat = Aexp(-Ea/RT)
predicts that the enzyme rate doubles for every 10˚C increase in temperature until enzyme denatures
ternary comples
when an enzyme binds two substrates