Infectious Diseases Flashcards
Recognize common organisms + groups of organisms Focus on resistant organisms and drugs that treat them Remember spectrum of activity for antimicrobial classes Practice assessing patient profiles for the exam
Communicable disease VS. non communicable
contagious, spread from person to person
Non-communicable disease: heart disease, stroke, HTN, DM
Hospital acquired infections are usually involving _______ _________ __________ organisms
multidrug resistant (MDR)
In order to diagnose a true infection, we need _________ & ______ in addition to positive culture
signs and symptoms
(Lipophilic? or Hydrophilic?) antibiotics are able to penetrate tissue better and resolve infections
lipophilic
The way a drug is cleared can determine the efficacy it has - ex: non renally cleared drugs may not reach adequate drug concentrations in the urine if that’s the target (UTI)
that’s it thats all
What patient characteristics can impact treatment choices
age, body weight, renal function, hepatic function, allergies, recent antibiotic use, pregnancy, immune function, comorbid conditions, vaccination status, environmental exposure, colonization with resistant bacteria
Common bacteria for CNS/Meningitis
Strep. pneumoniae
Neisseria meningitis
H. Influenzae
Group B Strep/ Ecoli (young pts)
Listeria (young/old)
Common bacteria that cause Upper Respiratory Infections
Strep. pyogenes
Strep. pnuemoniae
H. influenzae
Morexalla Catarrhalis
Common bacteria that cause Heart infections/Endocarditis
Staph. Aureus (including MRSA)
Staph. Epidermidus
Streptococci
Enterococci
Common bacteria that cause skin/ soft tissue infections
Staph. aureus
Staph. epidermidus
Strep. pyogenes
Pasteurella multocida
(+/- aerobic/anaerobic gram negative rods (GNR) in diabetes)
Common bacteria that cause bone/joint infections
Staph. aureus
Staph epidermidus
N. gonorrheae
Streptococci
GNR only in specific situations
Common bacteria that cause infections in the mouth
Mouth flora (peptostreptococcus)
Anaerobic GNR (prevotella, others)
Viridans group streptococci
Common bacteria that cause community acquired lower respiratory infections
Strep pneumoniae
Haemophilus influenzae
Atypicals: Legionella, Mycoplasma, Chlamydophilia
Enteric GNR in alcoholics
Common bacteria that cause hospital acquired lower respiratory infections
Staph aureus (including MRSA)
Pseudomonas aeruginosa
Acinetobacter baumannii
Enteric GNR (including ESBL, MDR)
Strep pneumoniae
Common bacteria that cause intra-abdominal infections
Enteric Gram Negative Rods
Enterococci/Strepcocci
Bacteroides Species
Common bacteria that cause Urinary Tract Infections
E Coli
Proteus
Klebsiella
Staph. Saprophyticus
Enterococci
Gram negative organisms
Thin cell wall, pink or reddish color from safranin counterstain
peptidoglycan is thin
Gram positive organisms
Thick cell wall, dark purple or blueish from the crystal violet stain
Peptidoglycan is thick
Atypical organisms
(ex: legionella, mycoplasma, chlamydia, mycobacterium tuberculosis) they don’t have a cell wall and don’t stain well.
Types of gram positive bacteria morphology under a microscope
Positive = Purple
Cocci (types: clusters, pairs (diplococci), and chains)
Bacilli aka rods
Anaerobes aka spores
Types of cluster (cocci) bacteria (Gram positive)
staphylococcus spp. (including MRSA, MSSA)
Types of pair & chain (cocci) bacteria (Gram positive)
strep. pneumoniae (diplococci = pair)
streptococcus spp.
enterococcus spp. (including VRE)
Types of rod (baccili) bacteria (gram positive)
Listeria monocytogenes
corynebacterium spp.
Types of gram positive anaerobes
Peptostreptococcus ( mouth flora)
Propionibacterium acnes
Clostridioides difficile
Clostridium spp.
Gram negative bacteria (pink) morphology includes
Cocci
Rods (that either colonize in the gut or don’t or curved/or spiral shaped)
Anaerobes
Coccobaccili (rod pairs /oval shaped)
Types of cocci (gram negative)
Neisseria spp.
Types of enteric rods (colonize the gut) (gram negative)
Proteus mirabilis, Escherichia coli, Klebsiella spp.
aka [PEK]
Serratia spp.
Enterobacter cloacae
Citrobacter spp.
Types of curved or spiral shaped rods (gram negative)
H pylori, campylobacter spp., treponema spp., borrelia spp., leptospira spp.
Types of rods that don’t colonize in the gut (gram negative)
pseudomonas aeruginosa
haemophilus influenzae
providencia spp.
types of coccobacilli (rod pairs /oval shaped) gram negative
Acinetobacter baumannii
Bordetella pertussis
Moraxella catarrhalis
Types of gram negative anaerobes
Bacterioides fragilis
Prevotella spp.
what is HNPEK
Haemophilus Influenzae
Neisseria
Proteus
E. coli
Klebsiella
what is CAPES
Citrobacter
Acinetobacter
Providencia
Enterobacter
Serratia
How is an antibiogram used
To determine the empiric therapies that can be used and help review resistance trends. Shows susceptibility patterns over a specific period (usually 1 yr) at an institution. The numbers show the percent susceptibility of each organism to the drugs
coccus, cocci, diplococci meaning
coccus - single
cocci - multiple
diplococci - pairs
What is an MIC
The minimum inhibitory concentration which is the lowest concentration with no bacterial growth
if the MIC is below the breakpoint, this means it is a good antibiotic to use!
We should never compare MIC’s between one antibiotic to another! Their values are specific to their minimum inhibitory concentration. We need to choose the MIC with the NARROWEST spectrum and (you have to know that part in your head, there’s no number associated with that)the one that is specifically best for the patient
What is the breakpoint
It is set by the clinical laboratory and standards institute and it is a standardized value for the concentration at which a particular bacteria was found to be susceptible to a particular drug
If the MIC is below the break point, it is susceptible, if it is one above the breakpoint, it’s intermediate, if it’s four above the breakpoint, its resistant
Synergy
Using two antibiotics to get a bigger benefit than just one antibiotic
sequence for choosing antibiotic therapy
- identify the organism through a culture
- check the susceptibility of the organism to different antibiotics
- determine with antibiotics have MIC’s below the break point
- determine which antibiotic has the narrowest spectrum and is the best for the specific patient (consider renal function, ability to penetrate specific area, drug interactions, dosage form, allergies, duration, adherence, inability to tolerate SE etc.)
How do we choose empiric treatment
- Think of the drugs that target the common organisms that infect the area where the current infection is.
- If there is a risk for MRSA, provide coverage
- Use the antibiogram and gram stain, if available, to narrow treatment selection
When the culture and susceptibility results come back in 24-72 hours, alwayssssss SET A TIME FRAME FOR THE ANTIBIOTICS! NEVER ALLOW THEM TO CONTINUE UNNECESSARILY
How should we monitor and assess the patients response to antibiotic treatment
- See their fever reduce and other vitals like O2 sat
- WBC trend
- Check notes for a reduction in the signs and symptoms of that particular infection
- Improved things like chest xrays, reduced markers of inflammation (procalcitonin, CRP, and ESR), repeat blood or CNS cultures - remember we DO NOT need to repeat sputum or urine cultures
E coli is resistant to vancomycin because
Vancomycin is too large to penetrate into Ecoli’s cell wall.
What is selection pressure
Another type of resistance.When an antibiotic kills off the bacteria that are susceptible to it, but it leaves behind the resistant bacteria and then they are able to multiply and become predominant which is a PROLEM!
Acquired vs. Intrinsic resistance
Intrinsic - the bacteria is naturally resistant to the antibiotic (ex: Ecoli and vancomycin because vancomycin is too large to penetrate the cell wall of ecoli)
Acquired - the bacterial DNA that has resistant genes is transferred from one species to another or picked up from dead fragments in the environment.
Describe enzyme inactivation and some examples
the bacteria naturally has enzymes that break down an important component of the antibiotic and reduces its effectiveness and enhances it’s resistance
Bacteria that produce beta lactamases break down beta lactams (ex: penicillins, cephalosporins, etc.) before they can reach their site of activity. We can use beta lactamase inhibitors like clavulanate, sulbactam, tazobactam, avibactam to prevent the enzymes from impacting the drug performance
ESBL’s - extended spectrum beta lactamases: enzymes that can break down all penicillins and most cephalosporins- very hard to kill and cause serious infections even with beta lactamase inhibitors. We typically use carbapenems or cephalosporin/beta lactamase inhibitor combinations
Carbapenem resistant enterobacteriacecae (CRE) are MDR gram negative organisms like Klebsiella and ecoli that produce enzymes like carbapenemases that break down penicillins and most cephalosporins and carbapenems. We use combinations of high intensity, toxic, and expensive drugs like polymixins, avibactam, and ceftazadime to kill these bacteria — this would be an advanced case of needing an ID pharmacist/antibimicrobial stewardship team to help with.
What are some common resistant pathogens and how are they resistant
“Kill each and every strong pathogen”
Klebsiella pneumoniae - ESBL, CRE
Escherichia coli - ESBL, CRE
Acinetobaceter
Enterococcus faecalis, Enterococcus faecium (VRE)
Staphylococcus aureus (MRSA)
Pseudomonas Aeruginosa
How does a C. Difficile infection occur
Clostridioides Diff. spores are present in normal gut flora, but it’s when the good healthy GI flora are killed off that resistant organisms have a chance to grow, become activated, and produce toxins. C diff does this and causes inflammation to the GI mucosa and causes a super infection. All antibiotics have a risk of causing this but especially broad spec. penicillins, cephalosporins, quinolones carbapenems, and BLACK BOX WARNING: CLINDAMYCIN not because it’s the worst offender but because it was the first offender to be identified but quinolones and broad spec. have more problems with this
Symptoms can be - mild: diarrhea, abdominal cramping severe: pseudomembranous colitis which can require a colectomy or be fatal. C diff infections continue to be difficult to treat
What does an anti-microbial stewardship program too
-Improve pt safety and outcomes
curb resistance to drugs
improve cost efficacy
Interventions ex:
- monitoring PK of aminoglycosides and vancomycin
- using clinical decision support software to help identify pathogens and reduce time to starting therapy
- pre-authorization of select antimicrobials (some antibiotics can’t be ordered unless antimicrobial steward team is consulted)
- prospective audit and feedback to prescribers of selected antibiotic
- timely transitions from IV to PO
Generally what types of antibiotics are bacteriocidal
The cell wall/membrane inhibitors, DNA/RNA inhibitors, aminoglycosides are bacteriocidal (kill bacteria)
Generally, what types of antibiotics are bacteriostatic ( inhibit bacterial growth)
Most protein and folic acid synthesis inhibitors
Example of synergy can be accomplished if we are able to pair one of these drugs with a cell wall/membrane inhibitor in order to allow the drug to even get inside the cell)
Which antibiotics are folic acid synthesis inhibitors
Sulfonamides
Trimethoprim (often combined with sulfamethoxazole overcome resistance)
Dapsone
Which antibiotics are cell wall inhibitors
Beta lactams (penicillins, cephalosporins, carbapenems)
Monobactams (aztreonam)
Vancomycin, dalbavancin, televancin, oritavancin
Which antibiotics are protein synthesis inhibitors
Aminoglycosides
Macrolides
Tetracyclines
Clindamycin
Linezolid, tedizolid
Quinupristin/Dalflopristin