IHC Flashcards
GFAP
Cytoplasmic and cell processes of astrocytes
Nestin
intermediate filament in embryonic nerve cells and hair follicle stem cells (can differentiate into multiple types of cells), proliferating new endothelial cells. Cytoplasm.
Synaptophysin
Neuroendocrine: Adrenal medulla, neuronal cells, neuroendocrine cells, pineal gland. Membrane and cytoplasm (integral membrane protein and pre-synaptic vesicles)
Vimentin
intermediate filament of mesenchymal cells; cytoplasm
Neurofilament
Neurons; cytoskeletal component of axons and dendrites
SOX-10
Transcription factor; neural crest derived tissues; expressed by melanocytes, mammary myoepithelial cells and Schwann cells. Melanoma & neural crest marker!
TTF-1
Thyroid Transcription Factor 1; found in the nucleus only! Thyroid, lung and diencephalic brain (thalamus/hypothalamus/pineal/pituitary) structures.
Chromogranin
secretory vesicles of neuroendocrine cells; Adrenal medulla (chromaffin cells), heart AV node, pancreas (islets), parathyroid (chief cells), thyroid (C cells)
Desmin
Intermediate filament in cardiac, smooth and skeletal muscle (GISTs are negative)
CD31/PECAM
PECAM; Membranous expression! Endothelial cells at cell junctions, megakaryocytes, pericytes, platelets, brown fat, trophoblasts, fibroblasts, spermatozoa, surface of platelets, monocytes, neutrophils and some types of T cells. key role in leukocyte trafficking across endothelium
Calponin
Actin-filament associated protein; Smooth muscle, myoepithelial cells, myofibroblasts, keratinocytes and nerve fibers
Alkaline Phosphatase
sarcoplasm of regenerating myofibers and cytoplasm of arteriole endothelial cells (not capillaries)
CD79a
B cells / B cell origin (with CD20) including plasma cells. May be positive when CD20 is negative.
CD20
B cells (not plasma cells)
CD45
also called leukocyte common antigen; NUCLEATED HEMATOPOIETIC CELLS (so not RBC’s, megakaryocytes or PLT’s).
CD18
leukocyte adhesion protein (deficiency leads to LAD); Neutrophils, macrophages, monocytes, NK cells and basophils
CD3
Thymocytes, peripheral T cells, NK cells (early cytoplasmic staining, then membranous)
c-KIT
AKA CD 117; proto-oncogene activated in GISTs and Mast Cell Tumors; cytoplasmic expression. Also found in interstitial cells of Cajal, hematopoietic progenitor cells, melanocytes, embryonic/fetal brain, endothelium, gonads, breast epithelium, germ cells.
S-100
show nerve sheath involvement (i.e Schwann cell) or melanocytic origin; neurons, myoepithelial cells, adipocytes, langerhans/ tissue and interdigitating dendritic cells, chondrocytes and notochord
PNL-2
melanocytes; cytoplasm
Melan-A
AKA MART1; cytoplasm. Anything that forms melanosomes.
DOG-1
GISTs only. Discovered On Gists 1. Membrane & cytoplasm.
Ki67
proliferation index during G1, S, G2 and M phases of cell cycle. Not found in G0 and early G1. Nuclear stain is the only one that “counts”.
CK AE1/AE3
Epithelial cells and trophoblasts; Detects CK1-8, 10, 14-16 and 19
CK 34BE12
Squamous, transitional and some ductal epithelium
CK5/6
Mammary myoepithelial cells, cornea, mesothelium, basal epithelium
CK 7
Glandular and transitional epithelium
CK 8/18
Carcinomas of epithelial origin and mesotheliomas
CK 20
Gastric, intestinal, urothelial epithelium and Merkel cells
Doublecortin
neurons
E-cadherin
decreased in carcinoma
Argyrophilic Nucleolar Organizer Region (AgNOR)
Proliferation marker; increased nucleolar silver stained dots increases the potential for malignancy
Calretinin
Adipocytes, mesothelial cells, endometrial stroma, Leydig cells, mast cells, nerves, ovarian theca cells, Sertoli cells
HMB-45
Melanocytes
Iba-1
Macrophages/histiocytes/microglia
Inhibin
Sertoli cells, granulosa cells, prostate, brain, adrenal gland
Laminin
Basement membrane
Tyrosinase-related protein-1 (TRP1) and 2 (TRP2)
melanocytes
Uroplakin I, II, III
urothelium
WT-1 (Wilms tumor)
Nephroblastoma
Luminal A
ER (+)
PR (+)
HER2 (-)
Luminal B
ER (+)
PR (+)
HER2 (+)
HER2
ER (-)
PR (-)
HER2 (+)
Basal-like
ER (-)
PR (-)
HER2 (-)
Perform CK5/6 and EGFR to define more precisely tumors in basal-like group
Luminal
Molecular category of Breast cancer with high expression of hormone receptors and associated genes (luminal A > luminal B)
HER2
Molecular category of breast cancer with high expression of HER2 and other genes in amplicon. Low expression of ER and associated genes.
Basal-like
Molecular category of breast cancer with high expression of basal epithelial genes, basal cytokeratins; low expression of ER and associated genes; low expression of HER2.
BRCA1-associated cancers
Carcinoma
PanCK (+)
LCA (-)
S100/HMB45/MART-1 tyrosinase (-)
Desmin (-)
Vimentin (-)
Lymphoma
PanCK (-)
LCA (+)
S100/HMB45/MART-1 tyrosinase (-)
Desmin (-)
Vimentin (-)
Melanoma
PanCK (-)
LCA (-)
S100/HMB45/MART-1 tyrosinase (+)
Desmin (-)
Vimentin (+)
Sarcoma
PanCK (-)
LCA (-)
S100/HMB45/MART-1 tyrosinase (-)
Desmin (+)
Vimentin (+)
Desmin, HHF35, SmActin
Smooth muscle
Myoglobin
Skeletal muscle
CD68, Factor XIIIa
Fibrohistiocyte