Glycolysis Flashcards

1
Q

What is the main focus of glycolysis

A

To generate energy from glucose

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2
Q

What is glycolysis

A

A sequence of reactions where gluscose from digestion is converted to two molecules of pyruvate

C6h12o6 to c3h3o3

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3
Q

What are the two stages of glycolysis

A

Trapping and preparation

Oxidation to pyruvate

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4
Q

What is the goal of the trapping and preparation step of glycolysis

A

Trap glucose in the cell and transform it into fructose 1,6 bisphosphate (something that can be better broken down)

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5
Q

What do the kinases in glycolysis do

A

Hydrolyze atp to adp to add a phosphate group to the molecule

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6
Q

What are the kinases that are used in the trapping and preparation step

A

First to make glucose 6 phosphate (Hexokinase)

Then to make fructose 1 6 biphosphate (phosphofructokinase)

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7
Q

What does Hexokinase do in terms of water

A

It removes water from its active site so that the reaction of atp with water to make adp doesn’t happen

I does this by having an induced fit

Want phosphorylated glucose, if water reacts then the atp won’t be used properly

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8
Q

What happens to make glucose stay in the cell for glycolysis to occur

A

It gets phosphorylates by Hexokinase and becomes more charged and polar

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9
Q

What does phosphoglucose isomerase do

A

Converted the hard to break down glucose 6 phosphate (more stable)

to the easier 5 membered fructose 6 phosphate (less stable)

Aldose to ketose

This is reversible

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10
Q

What happens to the fructose 6 phosphate

A

It’s gets phosphorylated to fructose 1,6 biohospahte

This is irreversible step and traps the fructose in this form so it can then be broken down

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11
Q

Is glucose to glucose 6 phosphate reversible

A

No

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12
Q

What happens to the F 16 biphosphates after it is made

A

Aldolase enzyme turns it into the 3 carbon Glyceraldehyde 3 phosphate which is used for stage 2 of glycolysis

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13
Q

What is the isomer problem of Glyceraldehyde 3 phosphate

What converts the isomers

A

We need the Glyceraldehyde 3 phosphate form but equilibrium favours the dihydroxyacetone version

The thing that converts the isomers is triose phosphate isomerase

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14
Q

In the first stage of glycolysis how much atp is formed and made

A

Atp is hydrolyzed twice to make two adp

So far no atp is MADE

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15
Q

How many steps in glycolysis

A

10 steps

5 steps in parts 1 and 2

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16
Q

What happens at the beginning of stage two of glycolysis

A

Glyceraldehyde 3 phosphate dehydrogenase reducers NAD to NADH

Oxidized inorganic phosphate

This turns Glyceraldehyde 3 phosphate to 1,3 bi phosphoglycersate through oxidation

17
Q

How many times does stage two in glycolysis happen

A

2 times out of

18
Q

What are the high energy compounds used to make atp from adp

A

1,3 BPG

Phosphoenol pyruvate

Creatine phosphate

19
Q

What are the low energy compounds that use atp to get phosphorylate and turn its into adp

A

Glucose 6 phosphate and glycerol 3 phosphate

20
Q

The more negative delta g of a reaction,

A

The more favourable the reaction

More likely it’ll proceed

21
Q

How much atp is made in the second stage of glycolysis

How much NADH

A

For 1 round 2 atp is made and 1 NADH

This step happens twice so 4 atp made and 2 NADH in total

22
Q

Where does glycolysis happen

A

In the cytoplasm

23
Q

Which has a higher absorbance, NAD+ or NADH

24
Q

The step to make 1,3 biphosphogycelrate in stage 2 of glycolysis has what type of intermediate

Why

A

A thio ester intermediate that’s linked to an enzyme

This lowers the energy barrier to go from being glycerldhyde three phosphate oxidized to the 1,3 BPG .

25
What is the delta g of the oxidation step in stage two glycolysis (to make 3 phosphoglycerate the oxidized version of Glyceraldehyde 3 phosphate
-50kJ/mo A very favourable reaction
26
How is the oxidized Glyceraldehyde three phosphate (3 phophoglycerate) turned into 1,3 BPG via the intermediate
Through covalent catalysis of an enzyme with the Thio ester intermediate
27
Once the 1,3 biphosphoglycarate is made, how does it turn into 3 phosphoglycerate
Through the enzyme phosphoglycerate kinase, it does substrate level phosphorylation to turn adp to atp
28
After 3 phosphoglycerate is made what turns it into 2 phsophoglycerste
Phosphoglycerate mutase Moving the phosphate from c 3 to c2
29
After 2 phosphoglycerate is formed what turns it into phosphoenol pyruvate What type of reaction does it do
Enolase It does a dehydration reaction and makes water leave
30
What is special about phosphoenol pyruvate
It’s a higher energy molecule meaning it’s has more potential to move a phosphoryl group from itself to adp It’s less stable than an alcohol
31
What happened after phosphoenol pyruvate is formed How is it an internal oxidation reduction
Pyruvate kinase help with substrate level phosphorylation and turns adp to atp The resulting c3 of pyruvate is more reduced (more H) and the c2 is more oxidized
32
What is the seventh class of enzymes
Translocases
33
What is the over all net atp gain of glycolysis What out Nadh gain
2 atp gained 2 NADH gained