Glycolysis Flashcards

1
Q

What is the main focus of glycolysis

A

To generate energy from glucose

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2
Q

What is glycolysis

A

A sequence of reactions where gluscose from digestion is converted to two molecules of pyruvate

C6h12o6 to c3h3o3

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3
Q

What are the two stages of glycolysis

A

Trapping and preparation

Oxidation to pyruvate

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4
Q

What is the goal of the trapping and preparation step of glycolysis

A

Trap glucose in the cell and transform it into fructose 1,6 bisphosphate (something that can be better broken down)

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5
Q

What do the kinases in glycolysis do

A

Hydrolyze atp to adp to add a phosphate group to the molecule

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6
Q

What are the kinases that are used in the trapping and preparation step

A

First to make glucose 6 phosphate (Hexokinase)

Then to make fructose 1 6 biphosphate (phosphofructokinase)

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7
Q

What does Hexokinase do in terms of water

A

It removes water from its active site so that the reaction of atp with water to make adp doesn’t happen

I does this by having an induced fit

Want phosphorylated glucose, if water reacts then the atp won’t be used properly

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8
Q

What happens to make glucose stay in the cell for glycolysis to occur

A

It gets phosphorylates by Hexokinase and becomes more charged and polar

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9
Q

What does phosphoglucose isomerase do

A

Converted the hard to break down glucose 6 phosphate (more stable)

to the easier 5 membered fructose 6 phosphate (less stable)

Aldose to ketose

This is reversible

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10
Q

What happens to the fructose 6 phosphate

A

It’s gets phosphorylated to fructose 1,6 biohospahte

This is irreversible step and traps the fructose in this form so it can then be broken down

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11
Q

Is glucose to glucose 6 phosphate reversible

A

No

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12
Q

What happens to the F 16 biphosphates after it is made

A

Aldolase enzyme turns it into the 3 carbon Glyceraldehyde 3 phosphate which is used for stage 2 of glycolysis

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13
Q

What is the isomer problem of Glyceraldehyde 3 phosphate

What converts the isomers

A

We need the Glyceraldehyde 3 phosphate form but equilibrium favours the dihydroxyacetone version

The thing that converts the isomers is triose phosphate isomerase

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14
Q

In the first stage of glycolysis how much atp is formed and made

A

Atp is hydrolyzed twice to make two adp

So far no atp is MADE

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15
Q

How many steps in glycolysis

A

10 steps

5 steps in parts 1 and 2

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16
Q

What happens at the beginning of stage two of glycolysis

A

Glyceraldehyde 3 phosphate dehydrogenase reducers NAD to NADH

Oxidized inorganic phosphate

This turns Glyceraldehyde 3 phosphate to 1,3 bi phosphoglycersate through oxidation

17
Q

How many times does stage two in glycolysis happen

A

2 times out of

18
Q

What are the high energy compounds used to make atp from adp

A

1,3 BPG

Phosphoenol pyruvate

Creatine phosphate

19
Q

What are the low energy compounds that use atp to get phosphorylate and turn its into adp

A

Glucose 6 phosphate and glycerol 3 phosphate

20
Q

The more negative delta g of a reaction,

A

The more favourable the reaction

More likely it’ll proceed

21
Q

How much atp is made in the second stage of glycolysis

How much NADH

A

For 1 round 2 atp is made and 1 NADH

This step happens twice so 4 atp made and 2 NADH in total

22
Q

Where does glycolysis happen

A

In the cytoplasm

23
Q

Which has a higher absorbance, NAD+ or NADH

A

NAD+

24
Q

The step to make 1,3 biphosphogycelrate in stage 2 of glycolysis has what type of intermediate

Why

A

A thio ester intermediate that’s linked to an enzyme

This lowers the energy barrier to go from being glycerldhyde three phosphate oxidized to the 1,3 BPG .

25
Q

What is the delta g of the oxidation step in stage two glycolysis (to make 3 phosphoglycerate the oxidized version of Glyceraldehyde 3 phosphate

A

-50kJ/mo

A very favourable reaction

26
Q

How is the oxidized Glyceraldehyde three phosphate (3 phophoglycerate) turned into 1,3 BPG via the intermediate

A

Through covalent catalysis of an enzyme with the Thio ester intermediate

27
Q

Once the 1,3 biphosphoglycarate is made, how does it turn into 3 phosphoglycerate

A

Through the enzyme phosphoglycerate kinase, it does substrate level phosphorylation to turn adp to atp

28
Q

After 3 phosphoglycerate is made what turns it into 2 phsophoglycerste

A

Phosphoglycerate mutase

Moving the phosphate from c 3 to c2

29
Q

After 2 phosphoglycerate is formed what turns it into phosphoenol pyruvate

What type of reaction does it do

A

Enolase

It does a dehydration reaction and makes water leave

30
Q

What is special about phosphoenol pyruvate

A

It’s a higher energy molecule meaning it’s has more potential to move a phosphoryl group from itself to adp

It’s less stable than an alcohol

31
Q

What happened after phosphoenol pyruvate is formed

How is it an internal oxidation reduction

A

Pyruvate kinase help with substrate level phosphorylation and turns adp to atp

The resulting c3 of pyruvate is more reduced (more H) and the c2 is more oxidized

32
Q

What is the seventh class of enzymes

A

Translocases

33
Q

What is the over all net atp gain of glycolysis

What out Nadh gain

A

2 atp gained

2 NADH gained