Genetics Flashcards
Genetic Objectives
Gene
Sequence of base pairs that encodes amino acid sequence for a protein.
Genome
Full set of genetic material. Contains DNA from mother and father
Diploid
2 genomes per cell, one from father and one from mother
Phenotype
Observed physical traits
Proto-oncogene
Normal growth promoting gene
“Central Dogma”
Code for life is encoded in DNA.
We only move from DNA to RNA, not backwards.
Process of transcription to translation.
Start codon
AUG
“methionine”
Sets the reading frame for translation
Stop codons
UAA
UAG
UGA
Doesn’t code for an amino acid
Unused mRNA
Allows RNA to last longer in cytoplasm, allowing more copies of its protein to be made
Codon
3 base pairs for 1 amino acid
Autosomes
Any chromosome that is not a sex chromosome
1-22
Ploidy
Number of full sets of chromosomes.
Euploid
Complete, normal set of chromosomes
Aneuploid
Abnormal set of chromosomes (e.g. Down Syndrome, 3 copies of chromosome 21)
Prokaryote
- Single cell organisms
- No nucleus
- Circular DNA
- Plasmids (separate DNA)
One copy of chromosome per cell (haploid)
Promoter
Gene sequence that instructs RNA polymerase to begin transcription
Terminator
Gene sequence that instructs RNA polymerase to stop transcription
Template strand
Strand of DNA from which RNA polymerase transcribes mRNA
Introns
Spaces between exons that are spliced out and discarded to make open reading frame
Spontaneous mutations
- Error during DNA replication.
2. Spontaneous DNA damage.
Induced mutation
- Carcinogen induced mutation.
2. Radiation induced mutation
Silent mutation
Does not result in amino acid damage
Missense mutation
Results in amino acid damage
Non-sense mutation
Causes a premature stop codon, stops translation early.
Frame-shift mutation
Drops or adds 1 or 2 bases, moves codons over, changes the ensuing sequence of codons
Allele
Variant forms of a gene sequence
Centromere
Localized region where two chromatids remain connected after the chromosomes have replicated
Kinetochore
Protein-bound areas of the centromere. Attach to spindle fibers forming chromosomal microtubules.
Centriole
Direct the movement of chromosomes during cell division
Spindle
Microtubules that distribute duplicated chromosomes to opposite ends of a dividing cell during mitosis.
Checkpoint
Points at which cell checks for defects and pauses cell cycle before continuing with cell division (G1, G2/M, Metaphase)
Polymerase
Enzyme that synthesizes long chains of DNA or RNA
Ribosome
Organelle that contains rRNA and proteins and is essential to mRNA translation and protein synthesis
Karyotype
Picture of human chromosome set, ordered from longest to shortest
Stages of Cell Division Cycle
- G1- replicate organelles
- S-synthesize DNA
- G2- Grow cytoplasm
- Mitosis
Meiosis I nondisjunction
Chromosomes do not separate in Meiosis I, resulting in 2 diploid cells that should be haploid
Meiosis II nondisjunction
Chromosomes do not separate in meiosis II, resulting in 1 diploid that should be haploid (and 2 haploid cells)
Sex limited phenotype
Phenotype that only shows up in one sex. Gene is found in autosomal chromosome, but only shows up in 1 sex
Cohesins
Keep sister chromatids together until separation at anaphase
Synaptonemal complex
Keeps the tetrad (2 pairs of sister chromatids) together during meiosis, involved with recombination
Oncogene
A gain of function mutation of a proto-oncogene. Causes uncontrolled growth.
Tumor suppressor gene
Gene that suppresses progression in the cell cycle in response to DNA damage.
e.g. P53 (involved in 50% of all cancers), BRCA-1
Non invasive neoplasia
A few cancer cells that have not started invading, causing damage YET
Preneoplasia
Benign, not yet cancer, but has risk to become cancer.
e.g. Adenomatous polyps
Somatic mutations
Mutations that occur in somatic cells that are not passed on to children.
Dedifferentiated
Cells mutate to the point that its difficult to determine where they came from.
e.g. Liver cancer cells metastasize, but its hard to tell they came from the liver
Mosaic
An organism that has different genomes, because the cancer cells have different genomes than the normal cells due to mutations
Translocation
When a piece of one chromosome is switched with a piece of a completely different chromosome
What is pharmacogenomics?
Study to identify patients at risk for toxicity or reduced response to therapy (due to genetics) prior to medication selection. Possible responses to therapy: 1. Benefit and toxicity 2. No benefit and toxicity 3. No benefit and no toxicity 4. Benefit and no toxicity
Turner’s Syndrome
Only 1 x chromosome
No Y chromosome
Typically infertile
Kleinfelter syndrome
XXY
Typically infertile