genetic variation Flashcards

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1
Q

population

A

group of organisms of the same species which live in a particular geographical area and have the
capability of interbreeding.

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2
Q

Population genetics

A

study of patterns and causes of genetic variation

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3
Q

Biological variation

A

phenotypic intra-species differences have a genetic basis (DNA) and may
have influence from the environment. Not only humans experience intra-species variation.

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4
Q

Genetic variation

A

catalyst for evolution. The source of variation is mutation which is a change in the DNA,
producing an altered gene (allele).

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5
Q

Genome wide association studies

A

sample genetic variations across a cohort of people who have the disease and a control cohort.

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6
Q

different forms of mutations

A
  • sequence polymorphism
  • length polymorphism
  • copy number variation
  • chromsome inversion
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7
Q

Evolution is a 2-step process

A

Step 1: You must create variation through mutations.

Step 2: Evolutionary forces then change allele frequencies over time.

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8
Q

what are the different types of evolutionary forces

A
  • mutations
  • gene flow
  • random genetic drift
  • natural selection
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9
Q

mutation

A

produces variation by continually producing new alleles.

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10
Q

Gene Flow

A

If one population that has one particular allele and interacts with another population, over time you will have a mixture of the two types of alleles in this population.

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11
Q

random genetic drift

A

It samples variation. Allele frequencies change due to chance.
- Typically during random genetic drift, an allele can be lost or fixed by chance.

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12
Q

Founder effect

A

a small group from an original population migrates and start their own founder
population increasing the allele frequency in that population which reduces genetic diversity

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13
Q

Bottleneck

A

a population is wiped out whereafter a selective pressure is advantageous to only some genotypes (fitness advantage) changing allele frequencies which reduces genetic diversity.

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14
Q

Natural selection

A

where some genotypes in a population leave more offspring than others.

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15
Q

Hardy-Weinberg law:

A

absence of evolutionary forces results in allele frequencies remaining constant from
generation to generation.

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16
Q

Assortative mating

A

form of sexual selection in which individuals with similar genotypes and/or phenotypes
mate with one another more frequently than would be expected under a random mating pattern.

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17
Q

Negative assortative mating

A

you pick a mate that is different to you resulting in an excess of heterozygotes.

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18
Q

Positive assortative mating

A

you pick a mate this is similar to yourself resulting in a deficiency of heterozygotes.

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19
Q

Inbreeding

A

Mating of consanguineous individuals increases the frequency of homozygotes in a population and decreases heterozygote frequency

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20
Q

Deleterious biological consequences

A

Consanguineous unions can increase the frequency of offspring with rare deleterious recessive conditions
- inbreeding depression

21
Q

Coefficient of inbreeding

A

probability that an individual has 2 genes at a locus that are identical by descent

22
Q

HETEROZYGOTE ADVANTAGE

A

you are likely to present more parts of a virus to your immune system than if you are homozygote for particular HLA alleles.

23
Q

polygenic model of inheritance

A

The model suggests how multiple genotypes can influence a particular phenotype

24
Q

hertiability

A

proportion of phenotypic variation attributable to genetic variation in a population.

25
Q

measuring heritability

A

The coefficient of relationships is represented by ‘r’ for two individuals in the proportion of genes that are identical by descent (recent copies

26
Q

Concordance rates

A

refers to when both members have a condition.

- It is tested within monozygotic twins and dizygotic twins.

27
Q

Continuous traits

A

show a series of overlapping phenotypic classes (eg. height and weight

28
Q

discontinous traits

A

traits show distinct phenotypes (eg. cancer and schizophrenia).

29
Q

hertiability complications?

A
  • hertiability is not constant
  • assortaive mating
  • genotype environment interaction
  • modification of histones
30
Q

USES OF HERITABILITY

A
  • predicting offspring value

- response selection

31
Q

linkage vs association studies

A
  • Linkage studies: seeks to identify chromosomal segments shared by affected family members. Affected sibling pairs results in large sample sizes.
  • Association studies: measures preferential segregation of a particular allele with a phenotype across families (eg. case control studies) usually in smaller sample sizes
32
Q

Behaviour

A

interface of the organism with its environment and as such preceded the evolution of many anatomical and physiological features. Behaviour is part of our interactions with one another.

33
Q

Survival:

A

recognising and avoiding predators and parasites; efficient foraging (obtaining energy); cooperating
and competing with conspecifics.

34
Q

Reproduction:

A

recognising and accessing mates; appropriate levels of care of offspring, infantilism, neglect.

35
Q

sexual selection

A

Increased individual fitness through obtaining a larger number of mates or better quality mates.

36
Q

Altruistic behaviour

A

behaviour that conveys an individual fitness cost to the actor and a fitness benefit to the recipient that may improve chances of reproductive success (helping an individual for no reason with no benefit).

37
Q

Kin selection:

A

if the solution exceeds the constraint then a behaviour with an individual fitness cost can evolve.

38
Q

Individual learning

A

allows individuals to respond to the environment he or she experience.
• Experience can change or reinforce behaviour.

39
Q

Social learning

A

allows individuals to respond without the potential cost of individual learning

40
Q

Ecology

A

relationship of an organism to its environment. It is the study of factors determining the numbers and distributions of an organism.

41
Q

Human ecology

A

the inter-relationships between humans and their environment (selective pressures).
• The environment provides selective pressure in order to reproduce more efficiently than their competitors.

42
Q

Adaptation:

A

sum of ecological interactions; process of interaction between the environment and a population.

43
Q

Types of genetic adaptations

A
  • species wide
  • population specific
  • acclimatisation
  • acclimation
44
Q

1st law of thermodynamics

A

energy cannot be created or destroyed, only converted from one form to another.

45
Q

2nd law of thermodynamics

A

energy conversions result in loss of free energy in the system (increased entropy

46
Q

Leibig’s law of the minimum

A

distribution of a species is controlled by that environmental factor for which
the organism has the lowest range of adaptability or control

47
Q

Law of tolerance

A

distribution determines by upper and lower bounds of physical tolerance.

48
Q

human disease how it effects populations

A

Disease: old adaptation in new environment.
• Natural selection does not set out to enhance health but maximises our number of offspring.
• Natural selection has much less power in later life than in early life (low reproductive value).