Genetic Variation Flashcards
isozymes
distinguishable proteins with the same or similar enzymatic activity
isoforms
proteins with similar functional and/or structural properties, may be derived from genes at different loci or from alternative splicing or post-translational modification
four possible consequences of multiple alleles at a locus
no phenotypic effect
contribute to the normal variation of a trait
affect disease susceptibility
directly disturb protein function and cause disease
polymorphism
the occurence of two or more allelic traits in a population with frequencies of at least 1-2%
single nucleotide polymorphisms
substitution of one base for another, may be conserved, occur every 100-200 base pair
heterozygosity occurs every 250-500 base pairs
an individual may be heterozygous at 6-12 million sites
haptoglobin
synthesized in the liver and binds free hemoglobin
composed of alpha beta subunits joined by disulfide bonds
several polymorphisms of the alpha subunit
peptidase
ubiquitous dipeptidase, illustrate a benign polymorphism in a dimeric protein
middle band indicates a type 2-1 hybrid dimer
psudocholinesterase
a “benign variant that behaves as a disease susceptibility gene in certain circumstances
important for degrading certain drugs such as succinyl dicholine, the atypical form leads to prolonged paralysis because it cannot degrade the drug as fast
indidstinuishable electrophoretically but is inhibited less by the dibucaine inhibitor
apolipoprotein-B
part of the cholesterol pathway, important for binding cholesterol
polymorphisms in the carboxy terminal at codons 3611 and 4154 have been identified, leads to 4 possible alleles and 10 possible genotypes
might lead to altered cholesterol metabolism and varying levels of cholesterol in the blood
detecting polymorphisms
at the level of protein - electrophoretic mobility, Km, thermostability, and other biophysical properties
at the level of the gene - sequence change in an exon
at the level of the genome - SNPs, STRs (short tandem repeats such as microsatellties)