Gastroenterology Flashcards

1
Q

Alpha 1 antitrypsin deficiency causes liver damage by what mechansism?

A

Accumulation of unsecreted intracellular mutant AAT proteins leading to hepatocyte death.

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2
Q

What is the most likely type of glomerulonephritis to occur in patients with cirrhosis from any cause?

A

IgA nephropathy. This is likely due to the reduced clearance of IgA immune complexes by Kupffer cells in the liver.

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3
Q

What are the main recognised risk factors for gord?

A

Obesity, alcohol, hiatus hernia, smoking, drugs (e.g. bisphosphonates)

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4
Q

What other diseases are associated with GORD?

A

High acid production - Zollinger Ellison syndrome. Poor acid clearance- scleroderma, other connective tissue disease, gastroparesis.

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5
Q

Is helicobacter pylori associated with GORD?

A

No

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6
Q

What conservative management strategy for GORD is most effective?

A

Avoiding food at least 2hrs before sleep

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7
Q

What’s the incidence of Barrets amongst pts with chronic GORD?

A

10-15%

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8
Q

Which factors influence risk of progression to malignancy in Barrets oesophagus?

A

Segment length (>3cm worse), dysplasia grade (nil vs low grade vs high grade).

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9
Q

What treatment options are available for low (recetly treating more aggressively) and high grade dysplasia in Barrets oesophagus?

A

Endoscopic mucosa resection (effective for shallow disease), endoscopic mucosa dissection (for submucosal invasion). Surgery. If none of the above can be tolerated due to anaesthetic risk associated with longer procedure length, radiofrequency ablation can be performed quickly.

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10
Q

What is the first line treatment for eosinophilic oesophagitis?

A

PPIs. Then topical dispersible budesonide. Elimination diets sometimes work, but in adults the cause is often a swallowed aerosol (cf in kids where it is usually a dietary cause). Oral steroids or steroid agents can be used if topical steroids don’t work. Dupilmumab (targegs IL-4 and IL-13) is highly effective, but is only PBS funded for eczema (atypical dermatitis) at present, but can be paid for for off label use.

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11
Q

What is the demographic of pts with eosinophillic oesophagitis?

A

Young men with previous allergies.

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12
Q

Achalasia can be managed by a per oral endoscopic myotomy (POEM)- what pt demographic is this important for and what medication is required to start with it?

A

Young people. Is a long procedure, so need to have limited comorbidities to make it work from anaesthetic risk pov. Provides 80-90% cure with low complication rate. Can be associated with reflux after- treated with 8 weeks of PPI following procedure. Require a scope at 5 years to evaluate oesophagus.

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13
Q

Achalasia can be managed with pneumatic dilatation of the lower oesophageal sphincter (LOS). Who is this procedure good for and why?

A

Older patients who can still tolerate an endoscopy. The procedure is inflating a balloon in the LOS until the LOS ruptures. It’s quick, 80-90% curative, however it does carry a 3% perforation rate. Much faster than POEM, thus better for more comorbid pts.

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14
Q

How should you manage achalasia in patients who will only tolerate a brief endoscopy?

A

Botox injections to the lower oesophageal sphincter - provide 60-70% response, but need re-doing every 6 months. Pharmacotherapy can be used if endoscopy is contraindicated - nitrates and peripheral calcium channel blockers.

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15
Q

What percentage of cirrhosis patients will develop varicies?

A

50-60%

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16
Q

What percentage of cirrhosis patients diagnoses with varicies will bleed within 2 years of diagnosis?

A

30%

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17
Q

How much blood do you need to produce from the upper GI tract to produce malena?

A

150mls. Frank blood follow through from the upper GI tract suggests >500mls of blood loss.

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18
Q

What is the mortality risk associated with a first variceal bleed?

A

> 30%

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19
Q

In patients with oesophageal varicies, what treatment options are available to reduce the risk of having a first bleed?

A

Managing underlying portal hypertension with non-cardioselective beta blockade - carvedilol > propanolol - cam decrease risk by 50%. Target HR reduction of 25%.

Endoscopic banding of large varices may have additional benefit.

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20
Q

What are the interventions known to provide a mortality benefit in patients suspected of having an upper GI variceal bleed?

A

IV antibiotics (greatest impact on mortality, up to 50% reduction), terlipressin, octreotide, early endoscopy and banding.

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21
Q

What treatment options are available for variceal bleeding that is unable to be controlled initially with endoscopic banding?

A

Sengstaken-Blakemore or Linton tube - NGT that inflates in the lower third of the oesophagus to form a tamponade- can only be left in place for 12-24hrs. Danis stent - endoscopically inserted stent that tamponades the oesophagus- can be left for 7 days. Transjugular intrahepatic porto-systemic shunt (TIPSS) - rapidly addresses portal hypertension- carries risk of hepatic encephalopathy, especially in elderly pts and/or those with child’s B/C cirrhosis. Also can’t be done until bleeding tamponaded by one of the above methods.

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22
Q

After a variceal bleed is controlled, what options are available for secondary bleeding prophylaxis?

A

Beta blockers + band ligation is provided to all patients. In select patients, a transjugular intrahepatic porto-systemic shunt can be used. However a TIPSS procedure is usually a bridge procedure to get the patient to the most effective treatment- a liver transplant.

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23
Q

Is alcohol associated with an increased risk of peptic ulcer disease?

A

No. H. Pylori, smoking, NSAIDs and aspirin are.

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24
Q

Which drug is most greatly associated with peptic ulcer disease?

A

Aspirin. An alternative if pts are getting peptic ulcer disease might by clopidogrel for their cardiovascular disease.

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25
Q

What’s the first line treatment for H. Pylori treatment in Australia?

A

HP7- esomeprazole, amoxicillin and clarithromycin for 7 days- about 85% effective. For patients with a penicillin allergy, substitute amoxicillin with metronidazole. Most likely drug that h. Pylori will be resistant to in this regimen is clarithromycin (around 10%), and 30% for metronidazole. Rescue options are available that involve levofloxacin, bismuth, rifabutin, doxyxyline, or taking a specimen and assessing sens.

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26
Q

What’s the treatment for h pylori negative peptic ulcer disease?

A

PPI BD for 2 weeks, then daily for 8 weeks followed by repeat gastroscopy- must make sure ulcer was not actually malignancy!

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27
Q

What treatment is used to manage a bleeding gastric ulcer after it is visualised endoscopically?

A

Clipping, adrenaline injection and heater probe coagulation on combination has the best outcome under endoscopic guidance. This should be accompanied by high dose IV PPI infusion for atbleast 72hrs.

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28
Q

What are the antibodies tested for coeliac disease?

A

Antigliadin (least sensitive and specific), antitransglutaminase - very sensitive and specific, antireticulin - very sensitive and specific, antiendomysial, specific and sensitive. Remember that IgA and IgG antibodies should be tested due to the ~5% prevalence of IgA deficiency in patients with ceoliac disease.

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29
Q

What HLA haplotypes are associated with coeliac disease?

A

HLA-DQ2 and DQ8. Almost always positive in pts with coeliac disease, but positive in many other people without the disease. Good negative predictive value. Remember that small bowel biopsy is necessary for diagnosis.

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30
Q

What are the other diseases associated with coeliac disease?

A

Autoimmune thyroiditis, alopecia, atrophic gastritis, reduced fertility and miscarriage, osteoporosis, autoimmune hepatitis, primary biliary sclerosis, IgA deficiency, Down Syndrome, type 1 diabetes, cardiomyopathy, dermatitis herpetiformis.

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31
Q

What disease is dermatitis herpetiformis associated with?

A

Coeliac disease

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32
Q

If a patient with coeliac disease presents with symptom recurrence despite strict adherence to a gluten free diet, what should you be worried about?

A

Small bowel non-Hodgkin’s lymphoma. Peak incidence 6th decade of life. Less often, small bowel adenocarcinoma.

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33
Q

How do you manage refractory coeliac disease?

A

Two types:
Type 1: has the usual population of intraepithelial t cells on biopsy of the small bowel. These pts usually respond to steroids of steroid sparing agents.
Type 2: clonal immature lymphocyte population in small bowel biopsy. Do poorly. May need some haematological treatment.

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34
Q

What’s the most effective method for reducing post ercp pancreatitis?

A

Indomethacin suppository

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35
Q

IgG4 disease- how is it detected?

A

Usually a mass seen, concerning for malignancy. Then someone thinks of IgG4 disease and does a IgG subclass test on the pts plasma, and it’s elevated in 70% of pts with IgG4 deposition disease. The ‘tumour’ is then hopefully biopsied and found on histopathology to have IgG4 throughout.

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36
Q

How do you manage IgG4 disease?

A

Steroids. If it recurs, consider traditional steroid sparing agents (MMF or AZA) for longer term immunosuppresion. If ongoing recurrence, rituxumab.

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37
Q

In patients with hepatitis C, what factors are associated with an increased risk of developing liver fibrosis?

A

Diabetes, obesity, MAFLD, alcohol, younger age at infection, HCV genotype 3, HIV co-infection, post menopausal women, host genetic factors

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38
Q

What is the APRI score?

A

AST to Platlet Ratio Index (APRI). A score that can be used to exclude fibrosis in patients with hepatitis c. Less than 1.0 is considered to exclude fibrosis.

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39
Q

In liver elastography, what mean liver stiffness (MLS) is considered abnormal?

A

> 12.5kPa

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40
Q

What non-hepatic complications are associated with hepatitis C infection?

A

Mixed cryoglobulinaemia, CKD, porphyria cutanea tarda (blistering skin on sun exposure), diabetes mellitus, non-hodgkin lymphoma, lichen planus, sjogrens, inflammatory arthritis, depression.

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41
Q

For the purpose of hepatitis c treatment, what are protease inhibitors? What’s important to know when prescribing them?

A

Inhibit the NS3/NS4A viral protein protease- critical to viral protein production. They are contraindicated in decompensated liver failure.

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42
Q

How is hepatitis B typically transmitted in low endemicity countries?

A

Parenteral, percutaneously or sexualising.

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43
Q

Which hepatitis B genotypes
is associated with the greatest risk of cirrhosisand HCC?

A

Genotype C.
B is associated with slower progression and lower rates of HCC. A and D sit somewhere in between B and C. F is associated with fulminant liver failure, but is very rare.

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44
Q

What is the HBeAg, and why is it helpful?

A

It’s a protein secreted by actively replicating hepatitis B virus- correlates with higher Hep B DNA plasma levels. Some patients with Hep B E Ag clearance may still have high levels of viral DNA due to having variant with a mutation in the promoter region for the E antigen. Cf Hep B core ab which simply suggests prior infection that may have been completely cleared. Pts with HBeAg positivity and viral DNA >20k should be treated with antiviral medication. Pts without HBeAg with DNA>2k should be treated with antivirals.

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45
Q

What serology and LFT profile would a pt with chronic hepatitis B have in immune active and inactive phases?

A

HBsAg positive for >6 months is required to diagnose hep b. Hep B core ab will also be positive. If so, Hep B e Ag, positivity with DNA > 1 million and normal ALT is the immune tolerance phase and doesnt eequire treatment. Hep B e Ag positivity with DNA > 20000 and raised ALT equates to immune active phase requiring treatment. If Hep B e Ag negative with DNA > 2000 with anti-hep B e ag ab and raise ALT, this also equates to immune active phase and requires treatment. If Hep B e Ag negative, Hep B e Ag antibody positive, DNA <2000, and ALT negative, this is inactive chronic Hep B and doesn’t require treatment.

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46
Q

In hepatitis B chronic infection, what increases risk of progression to cirrhosisand HCC?

A

HBeAg negative with DNA +ve , high DNA, genotype C, HIV, Hep C, Hep D, male, older age, recurrent flares, high ALT, diabetes, history of HCC, heavy alcohol intake, smoking, exposure to aflatoxins (mould toxins).

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47
Q

What is occult hepatitis B? When should you check for it?

A

When surface ag is negative, bur DNA is positive. Suspected with cryptogenix liver failure. Also important to test potential donors for hep B DNA in case of occult hep B.

48
Q

Why does hep B sAg ag persist even with complete cure?

A

The DNA that is used to produce the Hep B sAg Ag protein is incorporated into host genome, however the other proteins required by the virus need to be produced by free DNA in the cytoplasm which is eradicated in cure.

49
Q

What treatment options are available for acute hepatitis B?

A

Supportive only. Transplant if liver fails.

50
Q

What are the treatment options for chronic hepatitis B and how do they work?

A

Entacavir and tenofavir are first line options that will treat but not cure the virus. They are both nucleotide analogues. Entecavir is well tolerated. Tenofavir causes issues with one mineral density and can cause renal impairment. TDF is worse than TAF. The other treatment option is peg-interferon alfa-2a. This adverse reaction rich weekly injection (fatigue, flu like symptoms, anorexia, psychiatric symptoms, thyroid dysfunction, bone mineral density issues) can lead to cure. Treatment is for 12 months, is only pts in the active immune phase (HbeAg +ve), can’t be used in pregnancy, and often doesn’t work.

51
Q

Can you stop nucleotide analogue treatment for hep B in Hep B e Ag +ve pts?

A

Yes, trial ceasing 12 months after hep b e ag ab positivity.

52
Q

Which chronic hepatitis B pts are at the highest risk of reactivation?

A

Those on B cell depleting therapies, followed by those on anthracyclines, then those on mod to high dose steroids for > 4 weeks.
TNF and other cytokine inhibitors carry a moderate risk, but less than the above situations.

53
Q

Which hep b treatment can be used in pregnancy?

A

Tenofavir

54
Q

After curing hepatitis C, 2 factors are associated with ongoing increaswd risk of all cause mortality. What are they?

A

A history of decompensated liver disease and low albumin.

55
Q

Do Hepatitis C patients with cirrhosis on previous hepatitis elastography who reduce there liver stiffness measure to <12kPa need ongoing portal hypertension surveillance?

A

No. Can be discharged from surveillance. Note that treating hep c often leads to improvement in liver stiffness measures.

56
Q

Do pts with cirrhosis secondary to hepatitis C who have undergone curative treatment still require HCC follow-up?

A

Yes! The risk of HCC persists despite clearance of Hep C. They require ongoing HCC surveillance.

57
Q

What is standard HCC surveillance for pts with cirrhosis?

A

AFP and liver US every 6 months.

58
Q

Sofobuvir is a nucleotide analogue used to treat hepatitis C. What are its major contraindications?

A

Can’t be used with amiodarone (heart block) or during pregnancy. PPI use is also a relative contraindication throughout treatment.

59
Q

Hep B and Hep D both gain entry to hepatocytes via the same receptor. What is it called and why is it relevant?

A

NTCP receptor. Currently, direct hep b antiviral therapies have no impact on the hep D virus. In 2021, buleviritide, an inhibitor of viral entry via NTCP was approves to treat patients with concurrent hep B and hep D. The only other treatment that has benefit against hep d is peg-interferon, but it isn’t very effective.

60
Q

Do patients with cheonic hep B AND cirrhosis require treatment of they have a low viral DNA load and normal LFTs?

A

Yes! All cirrhosis pts with chronic hep B require long term treatment.

61
Q

Hepatitis E, what is it? Why does it matter?

A

Most common cause of death from hepatitis in the world. Transmitted faecal oral route or from infected pork. Extremely risky in pregnancy- 25% pregnant women with hepatitis e will die. Can be chronic in pts who are immunosuppressed.

62
Q

What are the recognised extrahepatic effects of hep e infection with good causal evidence?

A

Meningoencephalitis, GBS and neuralgic amyotrophy (upper limb nerve damage leading to weakness and occasionally upper limb neurological findings).

63
Q

What is the only approved treatment for chronic hepatitis e infection?

A

Ribavarin

64
Q

What populations require surveillance for HCC?

A

Patients with cirrhosis from any cause. Patients with chronic hepatitis B infection.

65
Q

What diagnostic imaging is required for hcc diagnosis? What will be seen if HCC present?

A

Four phase multi slice helical CT scan. HCC will demonstrate arterial phase hyperenhancement and portal venouse phase washout.

66
Q

What is standard of care treatment for advanced HCC?

A

Atezolizumab anti PDL1 and bevacizumab anti VEGF. Second line is sorafenib (VEGFR, RAF and platelet derived growth factor receptor inhibitor - TKI), or levatinib another TKI that inhibits VEGFRs.

67
Q

If a nodule is found on HCC surveillance US, when should you proceed to multiphasic CT for diagnosis?

A

If the nodule is less than 1cm, it can be monitored with a f/u US at 4months. If it is greater than 1cm or is growing on repeat US, then a CT is warranted.

68
Q

What’s the cut-off for liver transplant in patients with HCC?

A

3 or fewer nodules each 3 or fewer cms in diameter. Or! 1 nodule less than 6.5cm.

69
Q

What is the definition of acute liver failure?

A

Biochemical liver injury with hepatic encephalopathy within 12 weeks of jaundice.

70
Q

How do you manage mesenteric ischaemia?

A

Aspirin, fasting, IV abx. Don’t give pressors. Endovascular surgery often needed.

71
Q

What medications are most commonly implicated in pancreatitis?

A

Sulfasalazine, tetracyline and suphonamides, azathioprine, thiazides and furosemide, oestrogens, sodium valproate

72
Q

How is Whipple disease treated?

A

14 days of ceftriaxone IV follwed by 1 year of maintenance Bactrim DS BD.

73
Q

Grey Turner’s syndrome is associated with what form of pancreateisis?

A

Necrosis secondary to alochol abuse

74
Q

What are the criteria for diagnosing medical treatment refractory ascites?

A

Sprioonolactone 400mg/day and furosemide 160mg/day for 1 week with a salt restricted diet AND <0.8kg weight loss over 4 days and urinary sodium output less than intake. Also ealery recurrence of ascites within 4 weeks OR failure to tolerate diuretic managemetn

74
Q

What are the criteria for diagnosing medical treatment refractory ascites?

A

Sprioonolactone 400mg/day and furosemide 160mg/day for 1 week with a salt restricted diet AND <0.8kg weight loss over 4 days and urinary sodium output less than intake. Also ealery recurrence of ascites within 4 weeks OR failure to tolerate diuretic managemetn

75
Q

In CLD and ascites, when is TIPS indicated?

A

4 or more paraceteis required within 6 months. Hepatic encephalopathy is a relative contraindication.

76
Q

What is an ALFA pump?

A

Battery powerd subcut implant that moves asctes from the peritoneal cavity into the bladder. For patients who have failed TIPs or in whom TIPWS is contraindicated OR if the patient has a portal thrombus.

77
Q

What autoantibodies are associated with autoimmune hepatitis?

A

ANA, anti-smooth muscle antiboides (74% accuracy_, anti-soluble liver antigen/liver pancrease antibody, liver kidney microsome type 1 antibody, and pANCA.

78
Q

What HLA type is associated with increased risk of autoimmune hepatitis?

A

HLA - DRB1 0301

79
Q

What is current first line treatment for AIH?

A

Prednisolone and azathioprine

80
Q

What is cell transformation that occurs in Barrett’s oesophagus?

A

Squamous to columnar metaplasia

81
Q

What is the hepatic venous pressure gradient calculated by transietn elastography that indicates the presence of clincally significant portal hypertension?

A

HVPG >10mmHg

82
Q

Rifaxim is used in patients with cirrhosis to prevent recurrent heptatic encephalopathy. What else has it been shown to help with?

A

Reduces incidence of SBP

83
Q

How are statins helpful in cirrhosis?

A

Prevent hepatic decompensation in hep b and c virus cirrhosis, decrease risk of HCC and improve survival in patients who survived a bleeding episode from oesophageal varices.

84
Q

What vaccine should be given to patient’s diagnosed with coeliac disease?

A

Pneumococcal vaccine. They develop hyposplenism and are susceptible to encapsulated bacterial sepsis.

85
Q

What cancers do patients with coeliac disease get more frequently than the general population?

A

GI cancers and lymphoproliferative malignancy

86
Q

What cancers to patients with ceoliac disease get less often than the general population?

A

Breast, endometrial and ovarian

87
Q

How long does mucosal healing take in coeliac disease after commencing a gluten free diet?

A

Up to 2 years in children, upt to 8 years in adults. You would usually do a follow-up endoscopy at 12 months though to check for improvemen on a gluten free diet.

88
Q

How does prucalopride work?

A

5-HT4 receptor agonist

89
Q

When do extraintestinal minifestations occur with IBD?

A

At any time, and before an IBD diagnosis. However they are more common the longer the patient has had IBD.

90
Q

What cancers do E-cadherin 1 germline mutations predispose to?

A

Hereditary diffuse gastric cancer, lobular breast cancer.

91
Q

What is the inheritence pattern of herditary diffuse gastric cancer?

A

Autosomal dominant.

92
Q

How is Hep E transmitted normally in developed countries?

A

Contaminated food.

93
Q

When is the most dangerous time for young women to contract hep E?

A

3rd trimester of pregnancy. 25% mortality

94
Q

What other conditions have been linked to Hep E infections?

A

GBS, pancreatitis, glomerulonephritis and mixed cryoglobulinaemia

95
Q

What tests can be used to diagnose lactose intolerance?

A

Lactose tolerance test, hydrogen breath test, small bowel biopsy, breath testing

96
Q

What’s the most common cause for liver transplanation in Aus/NZ?

A

Hep C, then HCC, ALD, NASH, Hep B

97
Q

In small volume GI bleeding without haemodynamic compromise, should you do endoscopy or CTA first?

A

CTA

98
Q

When is high resolution manometry used?

A

After achalasia has been confirmed with barium swallow.

99
Q

What is the CYP enzyme primarily responsible for paracetamol metabolism?

A

CYP2E1. Alcohol induces this enzyme and can cause rapid metabolism of paracetamol to its toxic metabolites.

100
Q

What ab is associated with parimary biliaray sclerosis?

A

Classically, anti-mitochondiral abs. This is associated iwth abnormal ALP for greater than 24 weeks, nonsuppurative cholangitis, interlobular duct injury findign on loiver biopsy.

101
Q

What other autoimmune diseases is primary biliary scleorosis associated with?

A

Sjogren’s, thyroid disease, coeliac disease and systemic sclerosis.

102
Q

What is the firs line therapy for primary biliary sclerosis?

A

Ursodeoxycholic acid.

103
Q

What are the side effects of ursodeoxycholic acid?

A

Weight gain, hair loss, GI discomfort

104
Q

What is second line PBC treatment?

A

Obeticholic acid.

105
Q

How is pruritis managed in liver disease?

A

Cholstyramine and rifampicin.

106
Q

In small bowel bacterial overgrowth, what happens to folate and b12 levels?

A

Folate high - made by bacteria. B12 low - prevent nutrients like b12 making to the terminal ileum fo absorption.

107
Q

What side effects are caused by tacrolumus?

A

T2DM, electrolyte disturbance, seizures, AKI, hypertension, hyperlipidaemia, neurotoxicity, alopecia.

108
Q

Does tacrolimus cause bone marre suppresion?

A

No

109
Q

What receptors does terlipressin work on?

A

V1a receptors causing smooth muscle contraction in the splanchnic circulation. This increases blood flow to the kidneys and improves hepatorenal syndrome and also reduces the risk of variceal bleeding.

110
Q

What should be the treatment directly following haemostasis being achieved of an actively bleeding gastric or duodenal ulcer?

A

80mg PPI bolus followed by a 8mg/hr continuous infusion of PPI for 72hrs.

111
Q

What gastric probelm is associated with MEN1?

A

Gastrinoma and zollinger ellison syndrome

112
Q

Zollinger Ellison Syndrome features elevated gastrin release from gastric G cells. What effects does this have?

A

Increased hydrochloric acid secretion from parietal cells, stimulated growth of gastric mucosa, increased gastric motility, increases lower oesophageal sphincter pressure (preventing reflux), lowers ileocecal sphincter pressure (allows defaecation) increases pepsinogen secrtion from pepsin cells.

113
Q

What receptor does gastrin bind to exert its functions?

A

The cholecystokinin receptors

114
Q

What does secretin do?

A

Inhibits gastric, inhibits gastric acid secretion, inihibits stomach mucosa growth. Stimulates bicarb and bil from the biliary system. Stimulate pancreatic exocrine tissue growth.