Final Study Guide - Soil Biology Flashcards

1
Q

What is an ecosystem?

A

A community of living organisms that interact among themselves and with their physical environment (topography, air, water), interacting as a system

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2
Q

What biotic and abiotic factors drive soil biodiversity?

A

Abiotic (affects the most): Soil pH, organic carbon quantity and quality, soil moisture availability

Biotic: Plant species identity, predation and viral lysis

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3
Q

Discuss the different scales at which spatial heterogeneity in biotic and abiotic factors drives biodiversity (i.e. vertical, horizontal (small and large/landscape scale), temporal)

A

Biodiversity can change throughout soil horizons, different topography, and even at different times of the year

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4
Q

Discuss how global patterns of above and below ground biodiversity differ from each other

A

Higher above and below ground biodiversity near the tropics

Decrease in above ground diversity toward the poles but below ground also has high diversity close to the poles

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5
Q

What is a food web?

What kind of information does it give about the movement of energy in an ecosystem?

A

Shows the transfer of energy within an ecosystem

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6
Q

What is a trophic level?

A

An organism’s position within a food chain/food web

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7
Q

What are the basic trophic levels in all food webs?

A

Primary producers, primary consumers, secondary consumers, sometimes tertiary consumers

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8
Q

What are the fundamental soil ecosystem processes regulated by food web interactions?

A

Nutrient cycling, decomposition, plant growth, soil formation

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9
Q

What is the structure of an ecosystem? What is the function?

A

The structure is related to species diversity. The more complex the structure, the greater the species diversity The functions of ecosystems are related to the flow of energy and cycling of materials through structural components of the ecosystem

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10
Q

What are the most common ways of studying soil ecosystem structure (classifying soil biodiversity)?

A

Studying size, morphology, and taxonomical relatedness

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11
Q

Why do we prefer to classify soil biota by its size?

A

Reflects their functional roles in the ecosystem

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12
Q

What are the basic morphological characteristics of viruses?

What are the composed of and what cover do they have?
How big are they?

A

Acellular structures composed of a central nucleic acid core (DNA, RNA) with a protein or lipid cover. Size: 0.01-1 μm long

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13
Q

What are the possible ecological roles of soil viruses?

A

They contribute to nutrient turnover because they kill bacteria

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14
Q

Main morphological features of archaea

Unicellular or multicellular?
Eukaryotic or prokaryotic?
Low or high variety of cell shapes?

A

Unicellular, prokaryotic, and high variety of cell shapes

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15
Q

What are some examples of environments where archaea can be found? Are archaea always extremophiles? How do archaea contribute to the C and N cycle?

A

Hot and acid environments, hydrothermal vents, etc.

They are not always extremophiles

They can contribute to the C/N cycles as methanogens, sulfur oxidizers, and ammonia oxidizers

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16
Q

What are the basic morphological feature of bacteria?

Unicellular or multicellular?
Eukaryotic or prokaryotic?
Low or high variety of cell shapes?

A

Unicellular, prokaryotic, and high variety of cell shapes

Most numerous and diverse, smallest

17
Q

What are some important roles of bacteria in soils?

There are many, list them all

A

Photoautotrophs, lithoautotrophs, lithoheterotrophs, weathering minerals and nutrient cycling, decomposition, production of bioactive compounds

18
Q

Photoautotrophs

What do they do?

A

Release O2, fix N, pioneer accumulation of C/N

Week 7 Soil Biology 2 p10

19
Q

Lithoautotrophs

A

Important regulators of the N cycle

20
Q

Lithoheterotrophs

A

N fixing bacteria

21
Q

What are the basic morphological features of fungi? What type of ecological roles they play in soils?

Unicellular, multicellular, or both?
Eukaryotic or prokaryotic?

A

Uni- or multicellular, eukaryotic

Saprotrophic fungi (decomposition)
Symbionts (live in close interaction with plants)

22
Q

What are microbial grazers? What are some examples of microbial grazers and why are they important in soils?

A

Feed on the primary decomposers (bacteria, fungi, actinomycetes)

Examples are springtails (collembula), ants, termites, worms. Can stimulate the growth of microbial populations depending on grazing pressure

23
Q

What are the different groups of microfauna?

What size are they?

A

Nematodes, rotifers, tardigrades

(2μm-100μm) micrometer, millionth of a meter

24
Q

What are the different groups of mesofauna? What are their main ecological roles?

A

Protura, diplura, pseudoscorpions, symphylids, pauropoda, enchytraeidae, collembola, acari (mites)

Ecological functions: detritivores, microbial grazers, predators

2mm-100μm

25
Q

What are different groups of macrofauna? What are their ecological roles?

A

Ants, termites, earthworms, etc.

Ecological roles as ecosystem engineers

> 2 mm

26
Q

What are the different functional groups of soil microorganisms based on the substrates they use as electron donors?

A

Organic molecules: organotroph
Inorganic: lithotroph
Light: phototroph

27
Q

What are the different functional groups of soil microorganisms based on the substrates they use as electron acceptors?

A

Organic molecules: heterotrophs
Inorganic (usually CO2): autotrophs

28
Q

What are the different functional groups of soil microorganisms based on the substrates they use as C sources?

A

Oxygen: aerobes
Not oxygen: strict anaerobes
Both: facultative anaerobes

29
Q

What is an ecosystem engineer? Why are they important in soils?

A

An ecosystem engineer is something that has a large influence on soil ecological processes and interactions

They mix soil, help increase water infiltration, and increase aggregation