Final Exam deck! Flashcards
Aristotle
Viewed organisms as “fixed and unchanging”. Said that there are certain “affinities” among organisms, and concluded that organisms could be arranged on a ladder of complexity: “scala naturae”. This was contradictory to Darwin’s view
Compare Darwin’s concept of descent with modification to the other prevailing ideas of his time
Darwin asserted that organisms are well-suited for life because of small changes that occur over large periods of time, instead of an intelligent Creator that finely-tuned organisms to be suited for their environment.
Georges Cuvier
Paleontologist (studied fossils) - noted that the older the stratum, the more dissimilar the fossils were to current life-forms. Also noticed that some species appeared / disappeared. Even with these findings, he staunchly opposed the idea of evolution. Darwin used these findings to verify
Jean-Baptiste de Lamark
Thought that use and disuse would dictate how parts would be genetically past down through generations - the more something was used, the stronger (and larger) it became, and vice versa. These characteristics were then genetically passed down. Although Darwin did not agree with use/disuse, he did agree with advantageous characteristics being passed down to offspring as acquired traits.
Alfred Russel Wallace
Developed an hypothesis of natural selection that was nearly identical to Darwin’s. Darwin published his Origin of the Species book after reading Wallace’s hypothesis
James Hutton
Earth’s geologic features can be explained by gradual mechanisms, like valleys being formed by rivers.
Charles Lyell
Incorporated Hutton’s thinking into his proposal that the same geologic processes (gradual mechanisms) are operating today, at the same rate.
How did Hutton and Lyell’s findings influence Darwin’s thoughts on descent with modification?
Their thinking confirmed that the world was much older than the projected ages that were widely circulated at the time. Therefore, if the world were older, it would allow for descent with modification
Explain how, over time, natural selection results in organisms’ adaptation to their environment
In a genetically diverse population, traits that are more advantageous in some environments will be present (due to mutation, genetic drift, or gene flow). The challenges posed by a certain environment creates pressure (selective pressure) and these traits give their organisms advantage over other organisms with different traits, which means that the organisms with the more advantageous traits are more likely to survive and reproduce, passing along these advantageous traits to their offspring. Over time, this will result in the organism population adapting to its selective pressure via natural selection
Use examples to show how evolution is supported by scientific evidence
Homologous structures: structures in different species that are similar because of common ancestry
Vestigial structures: A biological feature of an organism that is no longer functional and is a remnant of a structure that served a function in the organism’s ancestors
Biogeography: the distribution of species indicates the presence of a unifying Pangea state where all continents were connected and then broke off
Convergent evolution: evolution of similar features that are independent from evolutionary lineages. Analogous structures are structures that are similar as a result of convergent evolution (not to be mistaken for homologous structures)
Describe factors that affect earth’s climate and explain how they influence patterns at different scales
Climate is affected by seasonality, large bodies of water, and mountains
Seasonality: variation in light and temperature with latitude, and how the sun hits the earth via the earth’s tilt
Bodies of Water affect climate: oceans (and their currents) along by nearby lakes moderate the climate of nearby land. Ocean currents flow between hot and cold depending on geolocation and have impacts on the land it passes
Mountains affect climate: rain shadow effect of sunlight and temperature wet - colder on the windward side, warmer, drier on the leeward side of the mountains
If an ecologist were studying the regional interactions among multiple populations of different species and how they influence the exchange of materials between their various environments, then this would be an example of which kind of research?
Question 1 options:
population ecology
landscape ecology
ecosystem ecology
global ecology
landscape ecology
What would happen to the seasons if Earth were tilted 35 degrees off its orbital plane instead of the usual 23.5 degrees?
Question 2 options:
The seasons would disappear.
The seasons would be shorter.
Winters and summers would be less severe.
Winters and summers would be more severe.
Winters and summers would be more severe.
Which of the following might be an investigation of microclimate?
Question 3 options:
the effect of ambient temperature on the onset of caribou migration
the seasonal population fluctuation of nurse sharks in coral reef communities
competitive interactions among various species of songbirds during spring migration
how sunlight intensity affects plant community composition in the zone where a forest transitions into a meadow
how sunlight intensity affects plant community composition in the zone where a forest transitions into a meadow
In creating global climate patterns, which of the following factors is the primary cause of all of the other factors that are listed?
Question 4 options:
global wind patterns
global ocean currents
precipitation differences between tropical and polar regions
variation in the heating of Earth’s surface
Variation in the heating of Earth’s surface
For mountain ranges that are subjected to prevailing winds, why is the climate drier on the leeward (downwind) side?
Question 5 options:
The sun illuminates the leeward side of mountain ranges at a more direct angle, converting to heat energy, which evaporates most of the water present.
Air masses pushed by the prevailing winds are stopped by mountain ranges and the moisture is used up in the stagnant air masses on the leeward side.
Deserts create dry conditions on the leeward side of mountain ranges.
Pushed by the prevailing winds on the windward side, air is forced to rise, cool, condense, and drop its precipitation, leaving drier air to descend the leeward side.
Pushed by the prevailing winds on the windward side, air is forced to rise, cool, condense, and drop its precipitation, leaving drier air to descend the leeward side.
Imagine some cosmic catastrophe jolts Earth so that its axis is perpendicular to the orbital plane between Earth and the sun. The most obvious effect of this change would be ________.
Question 6 options:
an increase in the length of a year
the elimination of tides
a decrease in temperature at the equator
the elimination of seasonal variation
the elimination of seasonal variation
Flycatcher birds that migrate from Africa to Europe feed their chicks a diet that is almost exclusively moth caterpillars. The graph shows the peak dates of flycatcher arrival in Europe, bird hatching, and peak caterpillar season for the years 1980 and 2000. The y-axis is a measure of the abundance of birds, hatching chicks, and caterpillars.
The shift in the peak of caterpillar season is most likely due to ________.
Question 7 options:
acid precipitation in Europe
global warming
an innate change in the biological clock of the caterpillars
earlier migration returns of flycatchers
global warming
The main cause of the increase in the amount of carbon dioxide in Earth’s atmosphere over the past 150 years is ________.
Question 8 options:
the burning of larger amounts of wood and fossil fuels
an increase in the amount of infrared radiation absorbed by the atmosphere
increased worldwide primary production
additional respiration by the rapidly growing human population
the burning of larger amounts of wood and fossil fuels
Examine the figure, which notes the average barrels of oil used per person per year in different countries. What can be concluded?
Question 9 options:
Residents of more populated countries use more energy per person.
English-speaking countries tend to use more energy per person.
Residents in warmer climates use more energy per person.
Residents of more affluent, industrialized countries use more energy per person.
Residents of more affluent, industrialized countries use more energy per person.
Describe Earth’s energy balance and how humans have altered it through the emission of greenhouse gases
Earth’s energy balance: 1) Solar Radiation passes through Earth’s atmosphere (some is reflected off the atmosphere) while most makes it through, 2) Radiation is absorbed on the Earth’s surface, warming it. 3) Energy is released as IR heat - some leaves the atmosphere while other parts get trapped in atmosphere via GHGs.
Humans have increased the levels of GHGs through carbon emissions, which leads to improper warming of the climate
Explain how the distribution of species is limited by abiotic and biotic factors
Organisms have certain temperature/water/etc needs in order to survive (abiotic) and thus they are confined to areas that provide those things in the quantity that it needs.
Organisms can also be confined to certain areas because of predators, species that can outcompete them for resources, and harmful microorganisms (biotic) causing them to be limited by biotic factors
Describe how ecological change and evolution affect one another over short and long periods
Example of long-term effects of ecological change and evolutionary change : origin and diversification of plants: the origin of plants themselves altered the chemical cycling of carbon leading to the removal of large quantities of CO2 in the atmosphere. As plant species continued to adaptively radiate over time, the appearance of new plant species allowed for new ecological niches, habitats, and sources of food for animals and insects, which stimulated speciation in animals too (as they adapted to fit these niches).
Example of short-term effect of ecological change on evolution: fisheries fishing for older cod will create selective pressure that favors younger cod that reproduce earlier. Younger cod do not reproduce at the same rate as older cod (slower) so the cod species may not be able to keep up with fish harvesting rates of the fishery
Darwin and Wallace’s theory of evolution by natural selection was revolutionary because it ________.
Question 1 options:
proved that individuals acclimated to their environment over time
was the first theory to refute the ideas of special creation
dismissed the idea that species are constant and emphasized the importance of variation and change in populations
was the first time a biologist had proposed that species changed through time
dismissed the idea that species are constant and emphasized the importance of variation and change in populations
The horizontal axis of the cladogram depicted below is a timeline that extends from 100,000 years ago to the present; the vertical axis represents nothing in particular. The labeled branch points on the tree (V-Z) represent various common ancestors. Let’s say that only since 50,000 years ago has there been enough variation between the lineages depicted here to separate them into distinct species, and only the tips of the lineages on this tree represent distinct species.
In Darwin’s tree of life, each fork in the tree represents ________.
Question 2 options:
the most recent common ancestor of the subsequent branches
morphologic gaps in the fossil record
groups of living organisms
groups of extinct organisms
he most recent common ancestor of the subsequent branches
Starting from the wild mustard Brassica oleracea, breeders have created the strains known as Brussels sprouts, broccoli, kale, and cabbage. Therefore, which of the following statements is correct?
Question 3 options:
Natural selection is rare in wild populations of wild mustard.
In this wild mustard, there is enough heritable variation to permit these different varieties.
Heritable variation is low in wild mustard—otherwise this wild strain would have different characteristics.
In wild mustard, most of the variation is due to differences in soil or other aspects of the environment.
In this wild mustard, there is enough heritable variation to permit these different varieties.
Which of these conditions are always true of populations evolving due to natural selection?
Condition 1: The population must vary in traits that are heritable.
Condition 2: Some heritable traits must increase reproductive success.
Condition 3: Individuals pass on most traits that they acquire during their lifetime.
Question 4 options:
Condition 1 only
Condition 2 only
Conditions 1 and 2
Conditions 2 and 3
Conditions 1 and 2
A farmer uses triazine herbicide to control pigweed in his field. For the first few years, the triazine works well and almost all the pigweed dies; but after several years, the farmer sees more and more pigweed. Which of these statements explains why the pigweed reappeared?
Question 5 options:
Triazine-resistant weeds were more likely to survive and reproduce.
The herbicide company lost its triazine formula and started selling poor-quality triazine.
Natural selection caused the pigweed to mutate, creating a new triazine-resistant species.
Triazine-resistant pigweed has less-efficient photosynthesis metabolism.
Triazine-resistant weeds were more likely to survive and reproduce.
Darwin used the phrase “descent with modification” to explain ________.
Question 6 options:
evolution of the unity and diversity of life
descent of all organisms from a single, ancient ancestor
unity of life
that habitat differences stimulate change in organisms
evolution of the unity and diversity of life
Given a population that contains genetic variation, what is the correct sequence of the following events under the influence of natural selection?
- Well-adapted individuals leave more offspring than do poorly adapted individuals.
- A change occurs in the environment.
- Genetic frequencies within the population change.
- Poorly adapted individuals have decreased survivorship.
Question 7 options:
4 → 2 → 3 → 1
2 → 4 → 1 → 3
4 → 2 → 1 → 3
2 → 4 → 3 → 1
2 → 4 → 1 → 3
Many crustaceans (for example, lobsters, shrimp, and crayfish) use their tails to swim, but crabs have reduced tails that curl under their shells and are not used in swimming. This is an example of ________.
Question 8 options:
a homologous structure
a vestigial trait
natural selection
convergent evolution
a vestigial trait
If the bacterium Staphylococcus aureus experiences a cost for maintaining one or more antibiotic-resistance genes, what would happen in environments that lack antibiotics?
Question 9 options:
These bacteria would try to make the cost worthwhile by locating and migrating to microenvironments where traces of antibiotics are present.
The number of genes conveying antibiotic resistance would increase in these bacteria.
These bacteria would be outcompeted and replaced by bacteria that have lost these genes.
These genes would be maintained in case the antibiotics appear.
These bacteria would be outcompeted and replaced by bacteria that have lost these genes.
Who both taught Darwin the art of taxidermy and inspired him to travel on the HMS Beagle?
Question 10 options:
Charles Lyell
Georges Cuvier
Alfred Russel Wallace
John Edmonstone
John Edmonstone
Define a population and three characteristics of populations: density, dispersion, and demographics
Population: is all the organisms of the same group/species that live ina specific area that can breed amongst themselves
Density: Number of individuals per unit area or volume
Dispersion: Pattern of spacing among individuals within the boundaries of the population
Demography: the study of key characteristics of populations and how they change over time
Population ecology
Explores how biotic and abiotic factors influence the abundance, dispersion, and age structure of populations
Identify what determines population growth
(Births - Deaths) + (Immigrants - Emigrants)
If both these numbers are positive, or if one number is much larger than the other negative number, populations will grow
Mark recapture method
1) Capturing, tagging, and releasing a random sample of individuals (s) into a population 2)Mix back into the population 3) capture a 2nd sample of individuals (n) and note how many are marked (x)
Population size (N) is estimated by N= (sn)/(x)
Mark recapture method is used to estimate the size of the population
Outline some major reasons to study population structure and growth
Understanding population structure and growth can help researchers come up with solutions with saving endangered populations. It can also help researchers understand how species interact with each other, and what the effect of climate change is on any given population.
dN / dt = rN
Calculates the rate of change at each instant in time
can calculate how many individuals will be added to a population each year if r (per capita or per individual change in population size) is known and N (total population size) is known.
Nt = N0 e^rt
The discreet equation that allows us to calculate how much a population has grown at any given time
Life tables
Researchers follow the fate of a cohort, a group of individuals of the same age, from birth until all the individuals are dead.
Building a life table requires determining the proportion of the cohort that survives from one age group to the next
Calculating death rate: Nt-Nt+1 / Nt
Differences between type 1, 2, and 3 survivorship curves
Type I: An organism that has low death rates at younger ages (starts flat)
Type III: An organism that has high death rates at younger ages (drops sharply at the start), but levels off as the survivors of the high-mortality juvenile stage live longer
Type II: Intermediate - constant death rate throughout the organism’s lifespan
Identify characteristics of species with different survivorship curves
Type I: An organism that has low death rates at younger ages and through reproductive age is going to give lots of care to their offspring to make sure they survive
Type III: An organism with high death rates at younger ages will not provide the same care to offspring as seen in type I, hence the reason why a lot of the younger population dies off
Type II: intermediate curves suggest that the organism lives in an environment with a constant likelihood of death that doesn’t change
Describe how life table data can be used to project future age structure, size, and growth rate of a population
It calculates the proportion of survivors and deaths per each year, which can help researchers visualize the growth of the population and the age structure (distribution of ages) of the organism.
Describe the exponential model of population growth and its key assumptions
It’s key assumptions are that it assumes that the population is an idealized and unlimited environment
dN/dt = rN
Assuming that r= 1
This helps researchers understand the capacity of a species to increase and conditions that may facilitate this growth
Discuss the distinction between factors that regulate population size and factors that determine population size
Only density-dependent factors can regulate population size, which involve: competition of resources, territoriality, disease, predation, intrinsic factors, and toxic wastes
Birth rate and/or death rate DO NOT change with population density - they are independent
Contrast the logistic and exponential models of population growth and define population carrying capacity
Exponential growth models describe population growth in an idealized, unlimited environment, which helps us understand the ability of an organism population to grow in conditions that facilitate its growth
The logistic growth model measures the per capita rate of population growth and factors in carrying capacity
the carrying capacity (K) = is the size of the population where growth reaches 0
Discuss how logistic regression incorporates limits to growth and shows how a population may stabilize around a maximum size (the carrying capacity)
The logistic model provides a useful starting point for thinking about how populations grow and for constructing more complex models. They are often measuring idealized environments that don’t have predators, food shortages, or other factors that may affect growth
The S-shape of the curve shows the area of highest growth (exponential growth, and the top portion of the S shows where population growth slows, when it approaches carrying capacity.
Define life history and explain how life history traits are products of natural selection
Life history: traits that affect an organism’s schedule of reproduction and survival
Natural selection favors traits that improve an organism’s chances of survival and reproductive success.
Contrast how density-dependent and density-independent affect population growth
Density dependent factors like competition, predation, disease, intrinsic factors, toxic waste, etc affect population growth quite obviously
Density independent factors are birth and death rates, that obviously also affect population growth but are not density dependent
Explain why populations fluctuate in size using the hare and lynx example
Some populations undergo boom-bust cycles (in contrast to others that have more unpredictable intervals of population cycles)
Hare and lynx have population cycles that are roughly 10 years - since Lynx prey on hare, the lynx population is expected to cycle with hare population.
Why does the hare population cycle? Two main hypotheses: food shortages for hare, or other predators overexploiting prey.
Neither food supply nor predation alone explains hare cycles. Increasing food supply and removing predators improved hare density the most, but did not eliminate cycling (this was due to birds of prey not being able to be eliminated via fences)
Discuss human population growth and projections of human population size in the future
The population is not growing exponentially anymore, but still increasing rapidly. No population can grow indefinitely, and this includes humans.
Demographic transition is associated with an increase in the quality of health care and improved access to education, especially for women
Describe the process of a demographic transition and why it results in rapid population growth during the transition
4 stages
Stage 1: Food shortages, malnutrition, lack of sanitation and medicines, accidents, etc keep death rates high. Birth rates are high as well, so population stays relatively constant.
Stage 2: Economy development brings more jobs, better medical care, improved standard of living, etc. Death rate falls rapidly while birth rate stays relatively the same. Population increases.
Stage 3: Populations grow rapidly - death rates are low, birth rates remain high but tapering off
Stage 4: This is the conditions of developed countries - transition is complete. Birth and death rates are both low, population is stable
Define ecological footprint and explain how it is determined
Ecological footprint: summarizes the aggregate land and water area needed to sustain a person, city, or nation
The use of logistic growth models can help determine the analysis of habitable land and food availability
Discuss how carrying capacity relates to ecological footprint
The use of logistical growth models can help determine the necessary requirements for land and food availability, which directly will predict the carrying capacity of human beings and what population number the Earth can sustain realistically
In the figure, which of the following survivorship curves implies that an animal may lay many eggs, of which a regular number die each year on a logarithmic scale?
Question 1 options:
curve C (type III)
curve B (Type II)
curves A or C
curve A (Type I)
curve B (Type II)
To measure the population of lake trout in a 250-hectare lake, 400 individual trout were netted and marked with a fin clip, then returned to the lake. The next week, the lake was netted again, and out of the 200 lake trout that were caught, 50 had fin clips. Using the mark-recapture estimate, the lake trout population size could be closest to which of the following? (N = sn/x)
Question 2 options:
200
400
1,600
80,000
1,600
An ecologist recorded 12 white-tailed deer, Odocoileus virginianus, per square kilometer (km2) in one woodlot and 20 km2 in another woodlot. What was the ecologist comparing?
Question 3 options:
carrying capacity
range
density
dispersion
density
Uniform spacing patterns in plants such as the creosote bush are most often associated with ________.
Question 4 options:
patterns of high humidity
the concentration of nutrients within the population’s range
the random distribution of seeds
competitive interaction between individuals of the same population
competitive interaction between individuals of the same population
A population of ground squirrels has an annual per capita birth rate of 0.06 and an annual per capita death rate of 0.02. Using these birth and death rates, calculate an estimate of the total number of individuals added to (or lost from) a population of 1,000 individuals in one year.
Question 5 options:
120 individuals added
40 individuals added
20 individuals added
400 individuals added
40 individuals added
Starting from a single individual, what is the size of a population of bacteria at the end of a 2-hour time period if they reproduce by binary fission every 20 minutes? (Assume unlimited resources and no mortality.)
Question 6 options:
16
32
64
128
64
120 minutes / 20 = 6 times of binary fission
2^6 = 64
During exponential growth, a population always ________.
Question 7 options:
grows at its maximum per capita rate
quickly reaches its carrying capacity
adds more new individuals when the population is small than when it is large
loses some individuals to emigration
grows at its maximum per capita rate
According to the logistic growth equation, dN/dt = rN[(K-N)/K)], ________.
Question 9 options:
the population grows exponentially when K is small
population growth is zero when N equals K
the per capita growth rate (r) increases as N approaches K
the number of individuals added per unit time is greatest when N is close to zero
population growth is zero when N equals K
Looking at the data in the figure from the hare/lynx experiment, what conclusion(s) can you draw?
I) Food is a factor in controlling hare population size.
II) Excluding lynx is a factor in controlling hare population size.
III) The effect of excluding predators and adding food in the same experiment is greater than the sum of excluding lynx alone plus adding food alone.
Question 10 options:
only III
I, II, and III
only II
only I
I, II, and III
Each female of a particular fish species produces millions of eggs per year. Draw and label the most likely survivorship curve for this species, and explain your choice.
Type III is most likely, because the female cannot cater to each offspring realistically and thus many will die
Imagine that you are constructing a life table like Table 53.1 for a different population of Belding’s ground squirrels. If 485 individuals are alive at the start of year 0-1 and 218 are still alive at the start of year 1-2, what is the proportion alive at the start of each of these years?
The proportion alive at the start of 0-1 is (1.000), all are alive
The proportion alive at the start of 1-2 would be 218/485 = .449
A male stickleback fish attacks other males that invade its nesting territory. Predict the likely pattern of dispersion for male sticklebacks, and explain your reasoning.
Male sticklebacks would likely have a uniform pattern of dispersion, with antagonistic interactions maintaining a relatively constant spacing between them
Clumped dispersion pattern cause
Organisms grouping together where food is abundant
Uniform dispersion pattern cause
Maintained by aggressive interactions between neighbors of the population
Random spacing pattern
Seeds scattered in random patterns via wind or animals
Explain why a population that fits the logistic growth model increase more rapidly at intermediate size than at relatively small and large sizes.
When N is small, there are not many organisms to participate in reproduction = low rate. When N is high, near carrying capacity, growth rate will slow due to lack of resources. Therefore, intermediate growth is best suited.
Given the latitudinal sunlight intensity, how might you expect the carrying capacity of plant species found at the equator compare with that of plant species found at high latitudes?
It would be expected that plants near the equator will have a larger carrying capacity than at high latitudes because more sunlight is at the equator.
Suppose that a sudden change in environmental conditions caused a substantial drop in a population’s carrying capacity. Predict how natural selection and genetic drift might affect this population.
Sudden change will cause a shift in allele frequencies in a population, and natural selection will favor individuals with advantageous genes, which will reduce genetic diversity. Lower carrying capacity will also cause population to drop, and thus will cause harmful alleles to be more prevalent due to genetic drift and therefore reducing the likelihood of the population to rebound.
Negative feedback is a process that regulates biological systems. Explain how the density-dependent birth rate of dune fescue grass exemplifies negative feedback
Negative feedback results in decrease of birthrate due to the output.
Dune fescue grass reproduce to high quantities (leading to higher population density), which this output will have a negative effect on birthrate
How does a human population’s age structure affect its growth rate?
Bottom-heavy (disproportionately young): will cause growth rate to increase
Uniform age structure: growth rate is stable
Top-heavy (disproportionately old): growth rate will decrease
How have the rate and number of people added to the human population each year changed in recent decades?
The growth rate of humans has slowed, but the population is still increasing rapidly due to an already large population
As an ecologist who manages a wildlife preserve, you want to increase the preserve’s carrying capacity for a particular endangered species. How might you go about accomplishing this?
Increasing food supply, limiting predators, and providing more sites for nesting and reproduction
Explain why ecological trade-offs are common.
They are common because organisms don’t have unlimited food/resources. Therefore, use of energy for one function (like reproduction) has a trade-off where there is less energy for other functions (like growth and reproduction).
Give an example of on biotic and one abiotic factor that contribute to yearly fluctuations in the size of the human population.
Biotic: disease, pathogen
Abiotic: natural disasters like earthquakes, tornados, hurricanes, etc
How do humans differ from other species in the ability to “choose” a carrying capacity for their environment?
Humans are equipped with higher levels of thinking and can control birthrates via means of contraception, and also controlling what we eat / personal lifestyle, which then has a direct effect on the carrying capacity of Earth
Describe how genetic variation arises and why it is a prerequisite for evolution
Use allele-frequency data to predict the genotype frequencies of a population in Hardy-Weinberg equilibrium
go for it
Differentiate between how natural selection, genetic drift, and gene flow affect allele frequencies in a population
Natural selection promotes individuals with certain heritable traits that provide an advantage to a particular environment. Therefore, natural selection affects gene frequencies as it favors desirable genes in a population
Genetic drift, on the other hand, revolves around chance events that occur and will result in allele frequency changes
Gene flow affects the frequencies of alleles in a population based on the movement of fertile individuals and their gametes. They physically transport varying genetic information to new areas and mate/produce offspring thus affecting allele frequencies.
Explain the process of natural selection
Genetic varations in a population lead to advantageous and disadvantageous traits in a certain environment with a certain selective pressure. Beings with more advantageous traits will be favored in this environment, which means they will be more likely to reproduce, passing their advantageous traits to their offspring.
Neutral variation
Mutations in noncoding regions of DNA (introns) that result in traits that are neither disadvantageous or advantageous in the environment. This can also be caused by redundant exons in genetic code that aren’t expressed.
Genetic variation
Genetic differences among individuals in a population, this is required for natural selection
Genetic drift
Revolves around chance events that decrease genetic variability in a population (more than likely a result from a large disaster)
Gene flow
Affects gene frequencies in a population due to migration of new genetic traits from neighboring populations
Bottleneck effect
A dramatic change in population due to a disaster which diminishes genetic variation. This process could randomly select alleles that may be advantageous or disadvantageous. Since genetic variability has decreased, the surviving members mating with each other will produce less genetically varying offspring, and populations may take a long time to recover (even longer if the surviving traits are not advantageous).
Founder effect
When a few individuals from a population are isolated and establish a new population with a differing gene pool from the source population
Directional selection
Shifts overall genetic makeup to one extreme of the distribution
Disruptive selection
Favors variants at either extreme of the distribution, with a dip in the intermediate portion of the distribution
Stabilizing selection
Favors intermediate genetic variants while eliminating either extreme
Balancing selection
Advantage of a trait is determined by how common it is in the population (oscillating defenses of the right or left mouthed fish)
Heterozygote advantage is also an example of balancing selection
Heterozygote advantage
Natural selection favoring two or more alleles at a locus due to heterozygotes having an advantage over the extremes - sickle cell anemia example
Another example of balancing selection
Relative fitness
The contribution an individual makes to the gene pool of the next generation relative to the contributions of other individuals
Microevolutions occur when ________.
Question 1 options:
individuals within all species vary in their phenotypic traits
a bird has a beak of a particular size that does not grow larger during a drought
changes in allele frequencies in a population occur over generations
gene flow evenly transfers alleles between populations
changes in allele frequencies in a population occur over generations
Which statement about the beak size of finches on the island of Daphne Major during prolonged drought is true?
Question 2 options:
Each bird that survived the drought produced only offspring with deeper, stronger beaks than seen in the previous generation.
Each bird evolved a deeper, stronger beak as the drought persisted.
Each bird’s survival was strongly influenced by the depth and strength of its beak as the drought persisted.
The frequency of the strong-beak alleles increased in each bird as the drought persisted.
Each bird’s survival was strongly influenced by the depth and strength of its beak as the drought persisted.
Which statement about variation is true?
Question 3 options:
All nucleotide variability results in neutral variation.
All new alleles are the result of nucleotide variability.
All phenotypic variation is the result of genotypic variation.
All genetic variation produces phenotypic variation.
All new alleles are the result of nucleotide variability.
Homozygotes with two sickle-cell alleles are selected against because of mortality. However, heterozygotes for sickle-cell allele experience little effects of sickle allele and are more likely to survive malaria. The net effect of this exposure produced evolutionary change in areas where malaria is endemic by ________.
Question 4 options:
increasing the number of infected mosquitoes
increasing sickle-cell allele frequency
causing sickle-cell allele
distortion of red blood cells
increasing sickle-cell allele frequency
Cystic fibrosis is a genetic disorder in homozygous recessives that causes death during the teenage years. If 9 in 10,000 newborn babies have the disease, what are the expected frequencies of the dominant (A1) and recessive (A2) alleles according to the Hardy-Weinberg equation?
Question 5 options:
f(A1) = 0.9997, f(A2) = 0.0003
f(A1) = 0.9604, f(A2) = 0.0392
f(A1) = 0.9700, f(A2) = 0.0300
f(A1) = 0.9800, f(A2) = 0.0200
f(A1) = 0.9700, f(A2) = 0.03
Suppose 64% of a remote mountain village can taste phenylthiocarbamide (PTC) and must, therefore, have at least one copy of the dominant PTC taster allele. If this population conforms to Hardy-Weinberg equilibrium for this gene, what percentage of the population must be heterozygous for this trait?
Question 6 options:
32%
16%
40%
48%
48%
Researchers studying a small milkweed population note that some plants produce a toxin and other plants do not. They identify the gene responsible for toxin production. The dominant allele (T) codes for an enzyme that makes the toxin, and the recessive allele (t) codes for a nonfunctional enzyme that cannot produce the toxin. Heterozygotes produce an intermediate amount of toxin. The genotypes of all individuals in the population are determined (see chart) and used to determine the actual allele frequencies in the population.
Is this population in Hardy-Weinberg equilibrium?
Question 7 options:
Yes.
More information is needed to answer this question.
No; there are more heterozygotes than expected.
No; there are more homozygotes than expected.
No; there are more homozygotes than expected.
An earthquake decimates a ground-squirrel population, killing 98% of the squirrels. The surviving population happens to have broader stripes, on average, than the initial population. If broadness of stripes is genetically determined, what effect has the ground-squirrel population experienced during the earthquake?
Question 8 options:
a genetic bottleneck
directional selection
disruptive selection
a founder event
a genetic bottleneck
Over time, the movement of people on Earth has steadily increased. This has altered the course of human evolution by increasing ________.
Question 9 options:
gene flow
nonrandom mating
geographic isolation
genetic drift
gene flow
A population of lab flies (drosophila melanogaster) are given endless resources (space and food) to live and reproduce. A mutation arises in that population that very slightly beneficial. This allele is most likely to be
Question 10 options:
equally likely to be fixed or lost
need more information
fixed
lost
fixed
Biological species concept
Biological species concept: a group of populations whose members have the potential to interbreed in nature and produce viable fertile offspring
Allopatric speciation
The physical separation of two populations –> interruption of gene flow
Sympatric speciation
No physical barrier (like geographic barrier) that inhibits gene flow. Reproduction is prevented by sexual selection, polyploidy, and habitat differentiation
Polyploidy
The presence of extra sets of chromosomes - will cause a new biological species in sympathy within a single generation
Hybrid zones / possible outcomes over time
Hybrid zones are areas of interbreeding between two populations, and involve 3 possible outcomes:
Individuals can hybridize readily –> No speciation
Individuals do not hybridize at all –> full speciation
Individuals can hybridize but offspring have reduced fitness –> speciation in progress. Selection for evolution of strong reproductive barriers.
Prezygotic barriers
Barriers that prevent mating and/or fertilization
Habitat isolation: Two species that occupy different habitats within the same area may encounter each other rarely, if at all
Temporal isolation: Species that breed during different times of the day, different seasons, or different years cannot mix gametes
Behavioral isolation: courtship rituals that attract mates are unique to a species but not others serve as barriers
Mechanical isolation: mating is attempted , but morphological differences prevent its successful completion
Gametic isolation: mating is attempted, but the sperm of one species may not be able to fertilize the eggs of another species
Postzygotic barriers
Barriers that prevent zygote development or reproduction
Reduced hybrid viability, fertility, and hybrid breakdown, causing lack of reproduction among hybrids
Two populations of birds with somewhat different coloration live on opposite sides of a peninsula. The habitat between the populations is not suitable for these birds. When birds from the two populations are brought together, they produce young whose appearance is intermediate between the two parents. These offspring will breed with each other or with birds from either parent population, and all offspring of these pairings appear intermediate to various degrees.
What keeps the two populations separate?
Question 1 options:
lack of hybrid viability
habitat isolation
temporal reproductive isolation
behavior isolates reproductive activities
habitat isolation
If biological species are defined in terms of reproductive compatibility, the formation of a new species hinges on ________.
Question 2 options:
reproductive isolation
gene pool expansion
hybrid formation
gene flow
reproductive isolation
Three populations of crickets look very similar, but the males have courtship songs that sound different. What function would this difference in song likely serve if the populations came in contact?
Question 3 options:
a behavioral reproductive isolating mechanism
a temporal reproductive isolating mechanism
a postzygotic isolating mechanism
a gametic reproductive isolating mechanism
a behavioral reproductive isolating mechanism
Which statement describes unity within a species?
Question 4 options:
A species is described in terms of its interaction with living and non-living environment.
The DNA sequence lacks similarities.
Members have the potential to interbreed in nature and produce viable, fertile offspring.
A species can be distinguished by body shape and other structural features.
Members have the potential to interbreed in nature and produce viable, fertile offspring.
Macroevolution is ________.
Question 5 options:
defined as a change in allele or gene frequency over the course of many generations
defined as the evolution of microscopic organisms into organisms that can be seen with the naked eye
evolution above the species level
the same as microevolution, but includes the origin of new species
evolution above the species level
Which of the various species concepts distinguishes two species based on the degree of genetic exchange between their gene pools?
Question 6 options:
morphological
biological
genetic
ecological
biological
Two species of frogs belonging to the same genus occasionally mate, but the embryos stop developing after a day and then die. These two frog species separate by ________.
Question 7 options:
reduced hybrid viability
gametic isolation
reduced hybrid fertility
hybrid breakdown
reduced hybrid viability
Which of the following describes the most likely order of events in allopatric speciation?
Question 8 options:
genetic isolation, genetic drift, divergence
genetic drift, genetic isolation, divergence
divergence, genetic drift, genetic isolation
genetic isolation, divergence, genetic drift
genetic isolation, genetic drift, divergence
You want to study divergence of populations, and you need to maximize the rate of divergence to see results within the period of your grant funding. You will form a new population by taking some individuals from a source population and isolating them so the two populations cannot interbreed. What combination of characteristics would maximize your chance of seeing divergence in this study?
- Choose a random sample of individuals to form the new population.
- Choose individuals from one extreme to form the new population.
- Choose a species to study that produces many offspring.
- Choose a species to study that produces a few, large offspring.
- Place the new population in the same type of environment as the source population.
- Place the new population in a novel environment compared to that of the source population.
Question 9 options:
1, 3, and 6
1, 4, and 6
2, 3, and 5
2, 3, and 6
2, 3, and 6
Which information is relevant to the ecological species definition?
Question 10 options:
Hawthorn and apple maggot flies are genetically distinguishable and have a distinct genetic profiles.
Hawthorn and apple maggot flies strongly prefer to mate and lay fertilized eggs in hawthorns and apples, respectively.
There is a 4-6% hybridization rate between hawthorn and apple maggot flies.
Hawthorn and apple maggot flies are physically indistinguishable.
Hawthorn and apple maggot flies strongly prefer to mate and lay fertilized eggs in hawthorns and apples, respectively.
Describe the steps by which simple cells may have originated from non-living materials
- Abiotic synthesis of small organic molecules
- Joining of these molecules into macromolecules
- Packaging of molecules into protocells
- Origin of self-replicating molecules
Explain what fossils are, how they are dated, and what the fossil record can reveal about life’s history
Fossils are remnants of organisms that have been preserved
Fossil record shows macroevolutionary changes over large time scales: emergence of terrestrial vertebrates, impact of mass extinction, origin of key adaptations
Fossil record is dated by using radiometric dating, using half lives
Describe how changes in the sequence or regulation of genes can result in major changes in body form
Hox genes can dictate major morphological changes to body form via small base pair changes to their genome.
Use examples to show how novel and complex structures can arise with descent with modification
The complex structure of the eye is a result of many years of small modifications via natural selection, each stage giving more function to the eye than the last.
Evidence for this is shown in organisms that have intermediate or primitive structures that resemble the eye, with limited function
Microevolution
The change of allele frequency within a population
Macroevolution
Broad patterns of evolutionary change above species level
Speciation
The divergence of a new species, which forms a bridge between micro and macroevolution
Ribozyme
Enzyme of RNA that catalyzes a chemical reactions, making complementary copies of short stretches of RNA
This characteristic RNA (along with genetic information storage) leads researchers to believe that RNA was the first genetic material, given its information storage and catalytic properties
Protocell
An abiotic precursor that resembled a cell because of its membrane-like structure, filled with fluid, and kept an environment inside it that was different from its surroundings
Similar to living cells
Endosymbiont theory
Theory about the origin of Eukaryotic cells, were an ancestral prokaryote engulfed an aerobic bacterium and they lived symbiotically until the bacterium became a part of the cell, forming mitochondrial organelles
A second endosymbiotic system occurs when an ancestral eukaryotic cell (a heterotroph) engulfed a photosynthetic bacterium, and this produced plastid organelles
Adaptive radiation
Follow mass extinctions, evolution of novel characteristics, or colonization of new regions.
Periods of rapid change and speciation: a rapid increase in the number of species with a common ancestor, characterized by great ecological and morphological diversity.
Evo devo
Field of biological research that compares the developmental processes of different organisms to infer how developmental processes evolved
Developmental genes and their role
They dictate development control rate, timing and spatial pattern of changes in an organism’s form as it develops to adulthood
Heterochrony
Evolutionary change in the rate and timing of developmental events. Altering timing of reproductive development relative to the development of non-reproductive organs
This has an impact on body shape (human vs chimp skull)
Paedomorphosis
The rate of reproductive development accelerates compared with somatic development (which is slower) this results in sexually mature species with juvenile morphology
Homeotic genes
Genetic material that determines where body features go
Hox genes
Are a class of homeotic genes that provide positional information during animal embryonic development
Changes in developmental genes can result in new morphological forms
Changes in Gene Regulation
Dictates which genes are regulated, and are probably the more likely contributor to changes to organism forms than sequence changes
Ex: sticklebacks in lakes have fewer spines than marine relatives due to lack of predation (Pitx1 controls ventral spine formation)
Changes in gene sequence
Changes in a gene sequence that cause major changes to morphological form, as in changes to homeotic genes
Which of the following is the correct sequence of events in the origin of life?
I. Formation of protocells
II. Synthesis of organic monomers
III. Synthesis of organic polymers
IV. Formation of DNA-based genetic systems
Question 1 options:
I, II, III, IV
I, III, II, IV
II, III, I, IV
II, III, IV, I
II, III, I, IV
The first genetic material on Earth was probably ________.
Question 2 options:
DNA produced by reverse transcriptase from abiotically produced RNA
DNA molecules whose information was transcribed to RNA and later translated in polypeptides
self-replicating RNA molecules
oligopeptides located within protocells
self-replicating RNA molecules
Which of the following organisms would be most likely to form a fossil?
Question 3 options:
a common worm
a rare squirrel
a rare worm
a common squirrel
a common squirrel
You are the lucky student of a wacky professor who develops a time machine. He asks if you will test it with him. You get in, and there is an immediate glitch—the date readout fails so that when you land, you are not sure what era you are in. As your time machine lands, you see an unusual landscape before you. As you open the door, you realize you cannot breathe. You quickly shut the door, realizing you are in the ________.
Question 4 options:
Cambrian period
Mesozoic era
Archaean eon
Cenozoic era
Archaean eon
What is true of the Cambrian explosion?
Question 5 options:
The Cambrian explosion marks the appearance of filter-feeding animals in the fossil record.
There are fossils of animals in geological strata that are older than the Cambrian explosion.
Only the fossils of microorganisms are found in geological strata older than the Cambrian explosion.
The Cambrian explosion is evidence for the instantaneous creation of life on Earth.
There are fossils of animals in geological strata that are older than the Cambrian explosion.
Which factor most likely caused animals and plants in India to differ greatly from species in nearby southeast Asia?
Question 6 options:
India is in the process of separating from the rest of Asia.
The climates of the two regions are similar.
India was a separate continent until 45 million years ago.
Life in India was wiped out by ancient volcanic eruptions.
India was a separate continent until 45 million years ago.
What concept explains the evolution of complex eyes?
Question 7 options:
Complex eyes evolved through a series of steps that benefited the eyes.
Mollusc eye’s evolution was dependent on vertebrate eye evolution.
Mollusc eyes evolved from a different ancestor than vertebrate eyes.
Through evolutionary history, eyes lose function of vision.
Complex eyes evolved through a series of steps that benefited the eyes.
Bagworm moth caterpillars feed on evergreens and carry a silken case or bag around with them in which they eventually pupate. Adult female bagworm moths are larval in appearance; they lack the wings and other structures of the adult male and instead retain the appearance of a caterpillar even though they are sexually mature and can lay eggs within the bag. This is a good example of ________.
Question 8 options:
allometric growth
paedomorphosis
sympatric speciation
adaptive radiation
paedomorphosis
The loss of ventral spines by modern freshwater sticklebacks is due to natural selection operating on the phenotypic effects of Pitx1 gene ________.
Question 9 options:
duplication (gain in number)
elimination (loss)
silencing (loss of expression)
mutation (change)
silencing (loss of expression)
The duplication of homeotic (Hox) genes has been significant in the evolution of animals because it ________.
Question 10 options:
permitted the evolution of novel forms
caused the extinction of major groups
reduced morphological diversity into simpler forms of life
allowed animals to survive on significantly fewer calories
permitted the evolution of novel forms
Explain how phylogenies are used
Used to classify organisms and determine their evolutionary relationships (systematics)
Derived vs. Ancestral traits, and explain how they are used to construct phylogenetic trees
Ancestral character: originated in an ancestor of a taxon
Derived character: evolutionary novelty unique to a particular clade
Understanding when derived characters appeared is useful
Cladistics
The process of grouping organisms by ancestry
Clade
A group of species that includes an ancestor and all its descendants
Outgroup
a species or group that is closely related to ingroup, but has diverged before the rest of the ingroup
Ingroup
various species that are being studied in phylogenetic tree that is being built
Construct a phylogenetic tree from a character table and discuss evolutionary relationships among organisms
Already practiced this, but re-visit if you have time!
Explain what molecular clocks are and how they are used using the HIV example
Molecular clocks are - constant rates of evolution found in some genes, and since they are used to predict evolutionary age/time by assuming constant evolutionary rate, has been used to track the lineage of the HIV virus
Hierarchical classification
Kingdom - phylum - class - order- family - genus-species
Sister taxa
Pairs of terminal taxa and/or clades that branch from a common node (ancestor) indicate that they are closely evolutionarily related.
Polytomy
A node where more than two lineages descend from a common node (ancestor) usually means that more research needs to be done to determine similarity
Homoplasy
Coincidental matches in nucleotide sequences in otherwise very different genetic codes
Monophyletic
A group of evolutionarily related taxa with all of their ancestors
Paraphylatic
Include some, but not all descendants of a common ancestor
Polyphyletic
Made up of a group of taxa that have converged via a similar trait/characteristic but do not share a recent common ancestor
Maximum parsimony
A phylogenetic tree that requires the fewest evolutionary events (appearances of shared derived characters) is most likely
Homologous genes
Homologous genes found in multiple species due to speciation
Nucleotide substitutions are proportional to time since divergence
Orthologous genes
Homologous genes found in genomes of related species from a common ancestor
Nucleotide substitutions are proportional to time since divergence
If organisms A, B, and C belong to the same class but to different orders and if organisms C, D, and E belong to the same order but to different families, which of the following pairs of organisms would be expected to show the greatest degree of structural homology?
Question 3 options:
A and D
B and D
B and C
D and E
D and E
Your professor wants you to construct a phylogenetic tree of orchids. They give you tissue from seven orchid species and one lily. What is the most likely reason they gave you the lily?
Question 6 options:
to serve as an outgroup
to see if the lily and the orchids show all the same shared derived characters
to demonstrate likely homoplasies
to see if the lily is a cryptic orchid species
to serve as an outgroup
The lakes of northern Minnesota are home to many similar species of damselflies of the genus Enallagma. These species have apparently undergone speciation from ancestral stock since the last glacial retreat about 10 thousand years ago. Sequencing which of the following would probably be most useful in sorting out evolutionary relationships among these closely related species?
Question 10 options:
conserved regions of nuclear DNA
amino acids in proteins
ribosomal RNA
mitochondrial DNA
mitochondrial DNA
Direct transfer vs vector-borne diseases vs zoonotic diseases
Direct transfer: Disease is transmitted between organisms directly through some form of bodily contact
Zoonotic diseases: Originate as an animal disease and can spread to humans
Vector-borne diseases: Animal vector transmits disease from one host to another (ie tick bite)