Final Flashcards
What is meant by a “live” virus?
it is capable of replicating
Are attenuated vaccines capable of causing infection?
yes
What is necessary for a virus to cause disease?
- must have sufficient virions to cause infection
- the cells targeted must be accessible, susceptible, and permissive
- the local antiviral defense must be absent or ineffective
What barriers are present in the respiratory tract to prevent infection
- mucus, ciliated cells, mucus-secreting glands, alveolar macrophages
- turbinates to prevent attachment
- tonsilar lymphoid tissues
T/F enveloped viruses are less susceptible to drying or inactivation through different environmental factors
false
If we have a stomach bug, typically it is a (enveloped/nonenveloped) virus
non-enveloped
What is important about the M cells of the alimentary tract
they are constantly sampling whatever’s in the gut and passing it on to the DCs
(the king’s wine taster)
what is the series of events that a virus needs to go through to cause disease?
- acquisition
- primary replication
- primary viremia
- activation of innate response
- incubation period
- -> asymptomatic or prodrome
- -> spread to secondary site
- replication in target tisse (DISEASE)
- secondary viremia
- immune response
- release (transmission)
- resolution or persistence
what are the steps of viral replication for a non-enveloped virus?
- recognition: viral attachment proteins (VAPs) identify specific host cells
- Attachment: VAPs bind to cell receptors (proteins or carbs); these attachment sites determine host range and tissue tropism
- Penetration/Entry
- non-enveloped enter by receptor-mediated endocytosis - uncoating: capsid/envelope removed; DNA delivered to nucleus, RNA to cytoplasm
- macromolecular synethesis: synthesis of viral mRNA and proteins
- most DNA viruses use cell RNA POL II
- most RNA viruses encode enzymes for transcription and replication
- all viruses depend on host ribosomes, tRNA, and post-mechanical mechanisms - Assembly: DNA in nucleus, RNA and Pox in cytoplasm
- Release: lysis, exocytosis
what are the steps of viral replication for an enveloped virus?
- recognition: viral attachment proteins (VAPs) identify specific host cells
- Attachment: VAPs bind to cell receptors (proteins or carbs); these attachment sites determine host range and tissue tropism
- Penetration/Entry
- enveloped enter by fusion of viral and cellular membranes - uncoating: capsid/envelope removed; DNA delivered to nucleus, RNA to cytoplasm
- macromolecular synethesis: synthesis of viral mRNA and proteins
- most DNA viruses use cell RNA POL II
- most RNA viruses encode enzymes for transcription and replication
- all viruses depend on host ribosomes, tRNA, and post-mechanical mechanisms - Assembly: DNA in nucleus, RNA and Pox in cytoplasm
- Budding: viral glycoproteins delivered to cell membranes; capsid interacts with glycoprotein-membrane and surrounds capsid
- budding occurs from plasm membrane, ER, Golgi, or nuclear membrane - Release: lysis, budding, exocytosis
replication cycle of (+)RNA Viruses
- entry
- translation
- transcription
- assembly
- release
replication cycle of (-) RNA viruses
- mRNA transcription and replication
- transcription
- assembly
- release
What makes retroviruses a bit slower to affect the host
it must integrate into the host genome-
how do viral mutations/recombinations/reassortments affect the virus
- new virus
- quasispecies
- defective genomes
- change the virulence
- affect disease outcome
what is a pseudotype virus
proteins/capsids from one virus and genome of a different one
allows you to protect against a harmless virus while utilizing the “shell” of a dangerous one that the body can react to immensely
T/F mutations occur constantly in viruses
true
what is reassortment
in which viruses does it occur?
- exchange of part of the genome
- occurs in all segmented viruses
What is viral pathogenesis outcome determined by?
- virus-host interaction
- host’s response to infection
what do viruses need to do in order to be effective
- break through barriers and invade cells
- evade immune control
- kill cells or trigger destructive immune reponse
determinants of disease
type of disease
- tissue tropism
- permissiveness of cells for replication
- portal of entry
- access to target tissue
- virus strain
- virulence factors
severity of disease
- virus strain**
- CPE
- immune status
- immunopathology
- inoculum size
- prior exposure
- general health and nutrition
- genetics
- age
what is the primary determinant of disease severity
virus strain
what is the primary determinant of disease type
tissue tropism
what do virulence genes do?
- affect ability of virus to replicate
- modify host defense mechanisms
- facilitate spread in and among hosts
- direct toxicity
what are the 3 outcomes of cytopathogenesis
- abortive infections
- lytic infections
- persistent infections
what are abortive infections
an infection in which the virus fails to replicate
what are lytic infections
“virus gets into the permissive cell and will replicate like mad and make the cell explode”
what are examples of persistent infections
- chronic: non-lytic, productive
- latent: limited, no virus synethesis
- recurrent: reactivation
- oncogenic: transforming
Recall the goals of immune response
- respond (prevent entry and spread, eliminate virus and infected cells)
- return to homeostasis (eliminate virus and infected cells, repair damage)
- remember (develop memory to respond more rapidly to second exposure)
why are inapparent or asymptomatic individuals a major source of contagion?
they don’t realize that they’re infected and spread the virus to susceptible hosts
what is the gold standard for Virus ID?
PCR
what is the structure of a poxvirus
diseases caused?
dsDNA
linear
envelope
smallpox, Molluscum contagiosum
what is the structure of a papillomavirus
diseases caused
dsDNA
circular
naked
warts, epidermodysplasia verruciformis, cancer
what is the structure of an adenovirus
diseases caused
dsDNA
linear+ 5’TP
naked
respiratory, conjunctival, GI infection
What is the structure of a Herpesvirus
disease caused?
dsDNA
linear
envelope
herpes, chickenpox, zoster, mono, lymphoma, congenital syndrome, roseola, sarcoma
T/F poxviruses are the largest viruses
true
Where do poxviruses replicate?
what do they encode for?
cytoplasm
encode enzymes for mRNA and DNA synthesis
poxvirus tissue tropism
epithelial cells
poxvirus tranmission
respiratory, contact
T/F poxviruses has a single envelope
false, double envelope
incubation period of poxviridae
5-17 days
symptoms of smallpox
high fever, fatigue, severe headache, backache, malaise
red spots on tongue and mouth –> papular rash –> pustules –> scabs
mortality rate of smallpox
15-62%
incubation period of molluscum contagiosum
2-8 wk period
transmission of molluscum contagiosum
contact, fomites
T/F smallpox and molluscum contagiosum are strict human pathogens, while other poxviruses are asymptomatic
true
diagnosis and tx of Poxviruses
- clinical: febrile prodrome, classic lesion, same stage of development
- microscopy: Guarnieri bodies; testing at CDC
tx: post-exp. vaccination; supportive care
tissue tropism of papillomaviridae
squamous epithelial tissue
transmission of papillomaviridae
direct contact, sexual, and vertical
oncogenic: cervical, anal, vulvar, penile, oral, laryngeal
what controls the replication of papillomaviridae
replication controlled by host cell’s transcriptional machinery
determined by differentiation of skin or mucosal epithelium
where are all of the genes of papillomaviridae located
on the (+) strand, the (-) strand is just a carrier
how do genital warts form?
- HPV invades the skin
- DNA from virus enter skin cells (makes proteins that induce epidermal growth factor)
- HPV causes infected skin cells to multiply and form warts
- Virus sheds, passing on to others
How does HPV lead to cancer?
To effectively replicate, the virus will break its own genome and integrate within the host genome, disrupting the cell cycle, thereby losing the brakes on that cell and inducing epidermal growth factor, leading to cancerous growth.
what are Koilocytes
enlarged keratinocytes with halos around shrunken nuclei
- hallmark sign of HPV(?)
What causes epidermodysplasia verruciformis
a genetic alteration in certain genes in the host, followed by contraction of HPV leads to a horny growht
which HPV strain causes warts
1-4
which HPV strain causes papillomas
6 and 11
which HPV strain causes Epi. verucciformis
5 and 8 + genetic mutation of EVER1/2
genital warts and cancers are caused by which strains of HPV
16, 18, 31, 45
diagnosis and tx of HPV
dx: visual, microscopic for hyperkeratosis; PAP smear for dysplasia; PCR for typing
tx: sx, cryotherapy, electrocautery, chemical, salicylic acid removal
Gardasil HPV vx
adenovirus tropism
mucepithelial cells, lymhpoid cells
adenovirus transmission
fecal-oral, respiratory, contact, fomites
what early proteins are required for replication of adenoviruses
- DNA Pol
- TP (rep. primer)
“very simply, virus recognizes receptor, enters cell, replicates, exits cell”
what do late proteins do to help adenovirus replication
- suppress immune response
- provide capsid components
general path of adenoviruses
- entry through respiratory mucosa (or other viable areas like eye)
- once in, tends to go to URT, the LRT, or GIT (transports through body via blood or lymph)
incubation period of adenovriuses
~4-8 days
T/F adenoviruses are easily spread
true
those at risk for adenovirus infectoin
- children <14 yo and people in crowded areas
- children shed virus for months
diagnosis and treatment of adenoviruses
dx: ELISA for ID; fluorescent Abs, PCR, ELISA for typing
tx: none; vaccine for type 4 and 7 for military use; CAdV2 for dogs
“you have a virus, go home and drink lots of fluids”
alpha-herpesviruses and site of latency
- herpes simplex virus 1 (neurons)
- herpes simplex virus 2 (neurons)
- varicella zoster virus (Chicken pox) (neurons)
beta-herpesviruses and site of latency
- cytomegalovirus (monocytes, lymphocytes)
- Human herpesvirus 6 (T cells)
- Human herpesvirus 7 (T cells)
gamma-herpesviruses and site of latency
- Epstein-Barr virus (B cells)
- Kaposi’s sarcoma herpesvirus (B cells)
what kind of infections do herpesviruses typically cause
- lytic, latent, persistent, or immortalizing infections
interesting feature of herpesviruses
they have their viral genome in the center, packaged inside a capsid, and keep what they need for replication (once they get into the cell) in the tegument (space btwn capsid and outer envelope
HSV 1 and 2 have:
- multiple glycoproteins
- bind heparan sulfate and nectin-1 for membrane fusion
if HSV1/2 gets into the epithelial cell, what kind of infection occurs
lytic
if HSV1/2 gets into the neurons, what kind of infection occurs
latent
T/F latent-infection herpesviruses recrudesce in response to stimuli like light, stress, fever, etc.
true
HSV1 infections are generally (Above/below) the waist
above
HSV2 infections are generally (Above/below) the waist
below
HSV1/2 epidemiology
- may be asymptomatic
- once infected, infected for life
- human disease
HSV1: 60-90 of population
HSV2: 20-25% of population (plus sexually active individuals and neonates)
HSV1/2 epidemiology
close contact, secretions (vesicle fluid, saliva, vaginal, semen)
HSV1/2 Dx and Tx
Dx: serology, PCR, CPE in cell culture
Tx: cell mediated immunity critical to control dz.
- Acyclovir,
HSV1 has a predilection for the ___
brain
HSV 2 rarely crosses into the ____ but can cause recurrent ______
brain
sacral meningitis
where does HSV1/2 establish latency
sensory dorsal root ganglia of the spine
what are the 6 childhood exanthems
- Measles
- Scarlet fever
- Rubella
- Chicken Pox
- Erythema Infectiosum
- Roseola infantum
paramyxovirus structure and diseases caused
ssRNA
Measles, mumps, RSV, Hendra/Nipah
streptococcus pyogenes structure and disease caused
a bacteria
scarlet fever
Togavirus structure and diseases caused
rubella (german measles)
herpesviruses structure and diseases caused
dsDNA, linear, envelope
fever blisters, genital herpes, chicken pox/zoster, mono, congenital syndrome, roseola, Kaposi Sarcoma
parvovirus structure and disease caused
ssDNA +/-, circular, naked
erythema infectiosum (Fifth disease)
Varicella Zoster Virvus, aka ___
HHV3 or VZV, chicken pox