exam I Flashcards
Name each functional group and enzyme used in rxn:
RC(=O)R → RCH(OH)R
Reduction of a ketone to an alcohol, which is the reaction catalyzed by oxidoreductase.
ROPO32- → ROH + Pi
This is the reaction catalyzed by a phosphatase.
RC(=O)NHR’→ RCOOH + R’NH2
This is the reaction catalyzed by a protease or amidase.
RC(=O)OR’→ RCOOH + R’OH
This is the reaction catalyzed by an esterase.
This is the structure of adenine
This is the structure of histidine
C6H9N3O2
This is the structure of flavin
This is the structure of ubiquinone
Pressure and Liquid density relationship
pressure is equal to the liquid density multiplied by the gravitational acceleration.
pressure formula p = ρgd, where ρ is the liquid density, g is the gravitational acceleration, and d is the depth where pressure is measured
What is the identity of an atom that contains six protons and eight neutrons?
Carbon
NF3
Polor or NP?
Polar
What is the molecular formula of the heterocyclic aromatic compound pyrrole?
C4H5N
What is the molecular formula of azepine?
C6H7N
**Size-exclusion chromatography **
Size-exclusion chromatography separates proteins by molecular weight, not selective column binding.
Cation-exchange chromatography
Cation-exchange chromatography
separates proteins with different positive charges (or positive versus negative/neutral charge). Its separation method is not based on selective binding to the column based on a functional group-specific chemical reaction or ligand-receptor interaction.
Anion-exchange chromatography
Anion-exchange chromatography separates proteins with different negative charges (or negative versus positive/neutral charge). Its separation method is not based on selective binding to the column based on a functional group-specific chemical reaction or ligand-receptor interaction.
Enantiomers can exhibit a difference in which chemical or physical property?
Smell
Enantiomers have the same physical and chemical properties. They differ only in their three dimensional arrangement of atoms and their interactions with other chiral molecules. They can differ in their smell due to interacting differently with chiral odorant receptors.**
Ammonium formate
NH4HCO2
Ammonium carbonate
Ammonium carbonate is (NH4)2CO3.
Ammonium bicarbonate
Ammonium bicarbonate is NH4HCO3
Ammonium acetate
Ammonium acetate is NH4CH3CO2
Positive Cooperative Binding
Binding of a substrate to an active site makes it easier for the others to bind.
Hill is greater than 1
Negative cooperative binding
makes it more difficult for the others to bind, leading to inhibition.
Hill is less than 1
No cooperativity
The binding of a substrate to one active site has no impact on susequent substrates
Hill = 1
E3 − E2
An ice cube at 0°C and 1 atm is heated to form steam at 100°C and 1 atm. Ignoring heat loss to the surroundings, what part of the process uses the most heat?
(Note: Specific heat of water = 1 cal/g°C. Heat of fusion = 80 cal/g. Heat of vaporization = 540 cal/g.)
Vaporizing all the water
Vaporizing all the water requires 540 cal/g, which is a greater heat requirement than specific heat or heat of fusion.
If both the capacitor and the power supply in Figure 1 are adjustable, which of the following changes would result in an increase in the charge on the capacitor?
Decreasing the separation between the parallel plates
Capacitance C is inversely proportional to the separation d between the parallel plates according to the formula C =(ϵ0 ϵr A)/d. A decrease in the separation corresponds to an increase in the capacitance. Given that the charge on the capacitor is directly proportional to the capacitance, an increased capacitance results in an increase in the charge as long as the power supply voltage is constant.
adaptive immune system
The adaptive immune response is mediated by immune cells known as lymphocytes. These are B and T cells. B cells secrete antibodies, highly specific protein molecules that bind to a specific pathogen. These antibodies bind specific parts of pathogen.
Innate Immunity
Innate immunity is our first defense against invaders. The epithelial and mucosal linings of our respiratory and GI tracts, as well as our skin are major components of the innate immune system.
Cells known as macrophages also play a large role in innate immunity. Macrophages recognize bacterial or viral components such as lipopolysaccharide (LPS) or double-stranded RNA (dsRNA), via special receptors known as Toll-like receptors (TLRs). TLR activation cause macrophages to secrete cytokines (small molecules involved in cell signaling and attraction), as well as to phagocytose the infected cells
Humoral immunity
Humoral immunity is immunity from serum antibodies produced by plasma cells. More specifically, someone who has never been exposed to a specific disease can gain humoral immunity through administration of antibodies from someone who has been exposed, and survived the same disease. “Humoral” refers to the bodily fluids where these free-floating serum antibodies bind to antigens and assist with elimination.
**Cell-mediated immunity **
Cell-mediated immunity can be acquired through T cells from someone who is immune to the target disease or infection. “Cell-mediated” refers to the fact that the response is carried out by cytotoxic cells.
phosphodiester linkages
Phosphodiester bonds link the successive nucleotides in the sequence of nucleic acids
Disulfide bridges
Disulfide bridges are Covalent bonds that link cysteine residues within protein.