Exam 3 - Outliers Flashcards
Bubonic Plague (lymph node infection)
Yersinia Pestis
gram negative bacillus (family Enterobacteriaceae)
BSAT - Biological Select Agents and Toxins
Yersinia Pestis
gram negative bacillus
BSAT - Biological Select Agents and Toxins
Yersinia Pestis (if family Enterobacteriaceae)
if not Enterobacteriaceae
Then it’s Francisella Tularensis (causes Tularemia)
Plague OR Tularemia
plasminogen activator protease think….
Yersinia Pestis
Enteric Fever (typhoid fever)
Salmonella Typhi and Paratyphi
Ulcerations
Typhoidal
Pneumonic
Francisella Tularensis
degrades c3b and c5a - prevents opsonization and phagocytic migration
degrades fibrin clots - permits spread and necrosis
Plasminogen activator protease (via the microbe Yersinia pestis)
transmitted by fleas
Yersinia pestis (black death / bubonic plague / pneumonic plague) Gram negative bacillus (family Enterobacteriaceae)
Rickettsia and Orienta
“atypical” small coccobacilli, obligate intracellular parasite
beta hemolytic colonies
Staphylococcus aureus
OR
Steptococcus pyogenes, group A
OR
Steptococcus dysgalatctiae and Steptococcus anginosus
(probably one of the first two probably not worth committing to memory these last two)
alpha hemolytic colonies
Streptococcus pneumoniae
OR
Viridans streptococci (associated with various low-frequency diseases (abscesses, bacteremia and endocarditis, dental caries, etc)
Otitis Media
Streptococcus pneumoniae (40% of all cases) Haemophilus influenzae
Moraxella catarrhalis (3rd most common cause of otitis media and sinusitis in children)
meningitis
Group B Streptococcus (neonates get meningitis and pneumonitis from vaginal flora)
Streptococcus pneumoniae (#1 cause of pneumonia, but also major cause of meningitis especially patients OLDER THAN 10 Y/O)
Haemophilus influenzae (Fulminating meningitis (HIB) in unvaccinated CHILDREN under 3 y/o and the ELDERLY via SUBMUCOSA of NASOPHARNYX)
Neisseria meningitidis (#2 cause of meningitis in SCHOOL AGE CHILDREN and COLLEGE STUDENTS)
Listeria monocytogenes (ENCEPHALOMENINGITIS)
IgA protease
Streptococcus pneumoniae OR Haemophilus influenzae OR Neisseria meningitidis
Necrotizing fascitis
Streptococcus pyogenes, group A (#1 cause)
Vibrio vulnificus
Aeromonas spp. (also gastroenteritis and dysentery like)
which two can be identified by testing CSF:
Streptococcus pneumoniae
Haemophilus influenzae
Nosocomial or one of the top causes of hospital infections
Enterococcus faecalis (gram + in chains post surgery and occasionally causes bacteremia)
Escherichia coli (UTI’s catheterization)
Pseudomonas aeruginosa (gram - bacillius) - more tissue infection than pulmonary (except in cystic fibrosis patients)
Acinetobacter baumannii (gram neg bacillus)
ALSO THE 6 listed under microbe 19 (Enterobacteriaceae of significance)
cystic fibrosis think….
Pseudomonas aeruginosa
burn patient with bacteremia and UTI
Enterobacter, spp
burn-wound and UTI alone
Providencia spp.
VIETNAM, afghanistan and Iraq and nosocomial
Acinetobacter baumannii (gram neg bacillus)
undulant fever in humans
Brucella melitensis and B. abortus
Describe Staphylococcus Aureus and the 8 things he added to the summary sheet about it
- coagulase positive
- MRSA
- invasive tissue infections, e.g. skin and tissue infections (invasive enzymes and toxins)
- food poisoning (pre-formed enterotoxin (EXO))
- Toxic Shock Syndrome (toxin)
- Toxic Epidermal Necrolysis (TEN) (scalded skin synddrome) (toxin)
- septicemia / bacteremia
- bone/joint infection
(COMPARE WITH SKETCHY)
coagulase negative staph, CNS — normal skin flora; endocarditis
Staphylococcus epidermidis
UTI in women of childbearing age
Staphylococcus saprophyticus
massive diarrhea (toxin)
Vibrio cholerae (curved bacilli)
Describe Streptococcus pyogenes, group A and the major things he added to the summary sheet about it
Invasive tissue infections (invasive enzymes and toxins)
- –impetigo, cellulitis, ersipeleas; scarlet fever – erythrogenic
- –necrotizing fasciitis (strep gangrene, invasive cellulitis, “flesh-eating bateria”) and streptococcal toxin shock syndrome (highly invasive enzymes and toxins)
Acute exudative pharyngitis – post streptococcal complications – rheumatic fever, acute glomerulonephritis
pneumonitis and meningitis in neonates from vaginal flora
Group B Streptococcus
pneumonia, otitis media, sinusitis; meningitis
Streptococcus pneumonieae (capsule, IgA protease)
bacteremia, nosocomial/ surgical wounds and UTI (multi-drug resistance)
Enterococcus faecalis
gastroenteritis from contaminated shellfish
Vibrio parahemolyticus
Vibrio cholerae (curved bacilli)
massive diarrhea (toxin)
septicemia, severe cellulitis, gastroenteritis
Raw uncooked seafood
severe cellulitis due to seawater
Vibrio vulnificus
gastroenteritis, especially from contaminated chicken or raw milk
Campylobacter jejuni (microaerophlic, curved bacilli)
Gram-positive cocci
Staphylococcus
Streptococcus
Enterococcus
Gram-negative cocci
Neisseria Moraxella (elongated)
Gram-positive bacilli
Corynebacterium (aerobic, non-sporeforming)
Listeria monocytogenes (aerobic, non-sporeforming)
Bacillus (aerobic, sporeforming)
Clostridium (anaerobic, sporeforming)
Special Culture or Exam Required (nonstaining by Gram’s method)
CCLMMR
Coxiella (ELISA, PCR)
Chlamydia (ELISA, PCR)
Legionella (immunodiagnostic)
Mycobacterium (acid-fast stain, PCR, special culture)
Mycoplasma (ELISA / EIA or special culture)
Rickettsia (immunodiagnostic)
Special Culture or Exam Required (nonstaining by Gram’s method)
Mycobacterium = ?
(acid-fast stain, PCR, special culture)
Special Culture or Exam Required (nonstaining by Gram’s method)
Chlamydia = ?
(ELISA, PCR)
What’s the Special Culture or Exam Required (nonstaining by Gram’s method) for the following:
Mycoplasma
(ELISA / EIA or special culture)
What’s the Special Culture or Exam Required (nonstaining by Gram’s method) for the following:
Legionella
(immunodiagnostic)
What’s the Special Culture or Exam Required (nonstaining by Gram’s method) for the following:
Rickettsia
(immunodiagnostic)
What’s the Special Culture or Exam Required (nonstaining by Gram’s method) for the following:
Coxiella
(ELISA, PCR)
What’s the Special Culture or Exam Required (nonstaining by Gram’s method) for the following:
Treponema
(immunodiagnostics, immunofluorescence microscopy)( darkfield)
What’s the Special Culture or Exam Required (nonstaining by Gram’s method) for the following:
Trichomonas
(protozoa, wet prep. microscopy)
Gram-negative bacilli (enteric only)
Escherichia - enteric Klebsiella - enteric Enterobacter - enteric Salmonella - enteric Shigella - enteric Proteus - enteric Providencia - enteric
Gram-negative bacilli (non-enteric)
Vibrio (curved) Campylobacter (curved, microaerophilic) Helicobacter (curved) Haemophilus Pseudomonas Aeromonas Plesiomonas Acinetobacter Bacteroides (anaerobic) Brucella Yersinia Francisella Bordetella Burkholderia
· gastroenteritis (diarrhea), esp. from contaminated poultry (chicken) and reptiles (turtles, salamanders)
· invasion of intestinal mucous membrane but w/o significant deeper invasion or bloodstream invasion
Salmonella enteritidis (Antigenic types B and D predominate in USA)
· initial invasion and multiplication w/in intestinal membrane followed by invasion of bloodstream
· invasion/localization in gallbladder, spleen, liver, bones
Salmonella typhi – typhoid fever
· dysentery (bacillary dysentery, shigellosis) - invasion of intestinal epithelial cells with sloughing and bleeding
· exotoxin produced by some strains
· endotoxins stimulate some disease responses
Shigella (Antigenic groups D and B predominate in USA)
· urinary tract infections (adherence and colonization)
· ETEC (severe watery diarrhea due to cholera-like enterotoxins, esp. in travelers)
· EHEC (hemorrhagic colitis; enteroinvasive - invasion of intestinal epithelium, dysentery/bloody diarrhea, shiga-toxins, endotoxin)
may cause hemolytic uremic syndrome; predominantly due to serotype O157:H7
Escherichia coli (genes for most toxins on plasmids) – normal fecal flora
· tuberculosis (pulmonary and/or disseminated)
primary TB – mild/asymptomatic – skin test pos; chest x-ray neg; no sputum produced
—–tubercle bacteria survive macrophage and in lymph nodes
—–CMI slows growth and causes inflammation; bacteria contained w/in tubercles; disease remains latent/dormant possibly for years
secondary TB – clinical TB – skin test pos, x-ray pos, sputum pos
—–CMI fails to contain growth; tubercles (Ghon complex) necrotic; enlarge and rupture into airways and blood vessels
Mycobacterium tuberculosis (acid fast bacillus) – use 3-5 drugs to overcome multi-drug resistance
pulmonary lesions and lymphadenitis; esp. in AIDS patients; resistant to many antituberculosis drugs
Mycobacterium avium-intracellulare complex –
meningitis in unvaccinated young children (HIB), epiglottitis, otitis media
Haemophilus influenzae –
chancroid (Asia)
Haemophilus ducreyi –
– meningococcal meningitis (primarily in ages 4-40; outbreaks in school settings)
Neisseria meningitis
– (urethritis, endocervicitis); septic arthritis
Neisseria gonorrhoeae
– atypical bacteria, tissue cell culture; lab diagnosis by Ag detection
· STD “non-gonococcal urethritis/cervicitis” ; Trachoma-Inclusion Conjunctivitis
Chlamydia trachomatis
mild pneumonia, bronchitis; atherosclerosis
Chlamydia pneumoniae –
· primary atypical pneumonia
Mycoplasma pneumoniae – atypical bacteria, not cultured on typical agar media; lab diagnosis by Ag or Ab detection
(atypical, obligate intracellular parasites) – ID by antigen or antibody detection from blood or biopsy
· Rocky Mountain spotted fever; Epidemic Typhus– headache, fever, pain, rash
· R. rickettsii, R. prowazekii (others) – species specific and vector specific
Rickettsia
– food poisoning, meningitis
Listeria monocytogenes
– anthrax
Bacillus anthracis
– anaerobic, food poisoning, gangrene
Clostridium perfringens
– anaerobic, botulism from food poisoning (pre-formed toxin)
Clostridium botulinum
– anaerobic, antibiotic associated diarrhea (pseudomembranous colitis)
Clostridium difficile
– anaerobic, tetanus (neurotoxin)
Clostridium tetani
– anaerobic, deep abscesses, aspiration pneumonia, empyema
Bacteroides fragilis
– opportunistic nosocomial pathogen, wound infections; resistant to many antibiotics
Pseudomonas aeruginosa
– opportunistic pneumonia
Klebsiella pneumoniae or Legionella
– opportunistic bacteremia, UTI, esp. in burn patients
Enterobacter
– nosocomial UTI and wound infections
Proteus
– opportunistic and nosocomial burn wound and UTI
Providencia
– opportunistic pneumonia
Legionella or Klebsiella
– peptic ulcers
Helicobacter pylori
– pertussis (whooping cough)
Bordetella pertussis
– diphtheria
Corynebacterium diphtheriae
(coagulase positive) (MRSA)
· invasive tissue infections, e.g. skin and tissue infections (invasive enzymes and toxins)
· food poisoning (pre-formed enterotoxin)
· Toxic Shock Syndrome (toxin)
· Toxic Epidermal Necrolysis (TEN) (scalded skin syndrome) ( toxin)
· septicemia / bacteremia
· bone / joint infection
Staphylococcus aureus
· invasive tissue infections (invasive enzymes and toxins)
impetigo, cellulitis, erysipelas; scarlet fever – erythrogenic toxin
necrotizing fasciitis (strep gangrene, invasive cellulitis, “flesh-eating bacteria”) and streptococcal toxin shock syndrome (highly invasive enzymes and toxins)
· acute exudative pharyngitis –> post-streptococcal complications – rheumatic fever, acute glomerulonephritis
Streptococcus pyogenes, group A
Heat Stable Enterotoxins (Genes on plasmids)
Two Options:
Enterotoxic E. Coli (ETEC)
or
Staphylococcus aureus
(OR BOTULISM, BUT NOT SURE ABOUT PLASMIDS)