Exam 3 Lecture 4 Flashcards

1
Q

________ is the disposal form of amino groups

A

Urea is the disposal form of urea groups

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2
Q

Urea is synthesized as part of the urea cycle, either from ______ or from ______

A

Urea is synthesized in the urea cycle either from oxidation of amino acids or from ammonia

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3
Q

Approximately ___ of AAs are reutilized

Excess of AA are not stored —-> forms _____

A

Approx 75% of AAs are reutilized

Excess of AAs are not stored… forms urea and gets excreted

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4
Q

In the urea cycle, amino groups donated by ______ are converted to urea, while ____________ act as intermediates

Urea production occurs in the ____ and us regulated by ______ and excreted through kidney

A

In the urea cycle, amino groups donated by ammonia and L aspartate are converted to urea, while L-ornithine, citrulline, L arginosuccinate, and L-arginine act as intermediates

Urea production occurs in the liver, and is regulated by N-acetylglutamate then excreted through kidney

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5
Q

What energy sources go into making urea

A

Synthesis of urea requires 3 mol ATP and an AMP

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6
Q

Urea is found dissolved in the blood…what is the normal range

What is urea excreted as

A

Urea is found dissolved in blood (range of 2.5 to 6.7 mmol/liter)

Urea is excreted as urine

(small amount of urea excreted as sweat)

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7
Q

In mamals, the urea cycle takes place primarily where?

What compound does the urea cycle start and end with?

A

In mammals, urea cycle takes place in the liver, to a lesser extent in the kidney

The urea cycle starts and ends with Ornithine

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8
Q

What are the five enzymes required in the urea cycle?

A

urea cycle enzymes:

Carbamoyl-P synthetase (CPS-1)

Ornithine Transcarbamoylase (OTC)

Argininosuccinate synthetase (ASS)

Argininosuccinate lyase (ASL)

Arginiase (ARG1)

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9
Q

What is the overall reaction for the urea cycle?

A

Overall reaction:

aspartate + NH3+ CO2+ 3ATP + 3 H20 ——->

urea + fumarate + 2ADP + AMP + 4 Pi

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10
Q

What is the major regulated step of the urea cycle?

A

Major regulated step of the urea cycle:

Formation of carbomyl phosphate by the enzyme CPS-1

Absolute requirement for N-acetylglutamate for this reaction

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11
Q

What is an important entry point in the urea cycle?

What is the major regulated step of the urea cycle?

A

Major regulated step is formation of carbmoyl phosphate done by the enzyme carbamoyl phosphate synthetase

ABSOLUTE requirement of N-acetylglutamate for the synthetase

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12
Q

What is the first amino group that enters the urea cycle?

A

Carbamoyl phosphate

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13
Q

Draw the urea cycle

A

Ordinarily careless crappers are also frivilous about urinating:

ornithine, carmaboyl phosphate, critrulline, aspartate, arginosuccinate, fumarate, aspartate, urea

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14
Q

Explain the linkage between the urea cycle and the TCA cycle:

fumarate is converted to ____ in the cytosol where it is then converted to _____ in the TCA cycle

OAA is transaminated and transported into the cytosol to form

A

Fumarate is converted to malate in cytosol, sent to mito to enter TCA cycle to be converted into OAA

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15
Q

Explain the concequences of the various defeciencies:

Carbamyl Phosphate synthetase

Ornithine transcarbamoylase

Arginosuccinate synthetase

Arginase

A

Carbamoyl phosphate synthetase defeciency: hyperammoneia

Ornithine defeciency: mental retardation and death

Arginosuccinate synthetase: excess of cirtulline in the blood and urine

Arginase: rare defeciency, developmental problems

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16
Q

Metabolic disorders or urea synthesis have dire concenquences.

Arise from abnormal function of enzyme and enzyme defeciencies, often cause_____ and ______

Therapy?

A

Often cause coma and death

Therapy:

limit protein intake

remove excess ammonia

replace intermediates

liver transplant

17
Q

_________ is a precursor of citrulline and arginine

______ is synthesized from 3-phosphoglycerate

A

Ornithine is a precursor of citrulline and arginine

Serine is synthesized from 3-phosphoglycerate

(Serine is a precursor of glycine and D-serine)

18
Q

Ornithine ———> _____

Shared intermediate is?

A

Ornithine ——> proline

Shared intermediate: glutamic semialdehyde

19
Q

3- phosphoglycertate———-> ________

A

3-phosphoglycerate goes to serine

20
Q

How can glutamate, alanine, and asartate get broken down?

How does serine get degraded?

How are ornithine and proline degraded?

A

Glutamate, alanine, and aspartate are deaminated by glutamate dehydrogenase

Serine gets degraded to 3 phosphoglycerate via dephosphorylation (note serine can also go to glycine)

Ornithine and proline degrade via glutamic semialdehyde

21
Q

Proline hydroxylation requires _______

What happens when you don’t have it

A

Proline hydroxylation requires ascorbic acid (vitamin C)

The most obvious first effects (gum and hair problems) of absence of vitamin C in humans comes from defect in hydroxylation of proline residues of collagen (causes scurvy)

22
Q

Explain PKU

A

PKU:

Inability to break down phenylalanine into tyrosine

Phe—-> tyrosine by enzyme phenylalanine hydroxylase

causes CNS problems

PKU tested by a blood test in infants

Treatment is diet low in phenylalanine , avoid aspartame

23
Q

Noticable side affect of PKU is what?

A

Musty body odor

24
Q

When would tyrosine become a conditionally essential AA?

A

In an individual with phenyalanine hydroxylase defeciency

25
Explain maple syrup urine disease
Maple Syrup Urine Disease: can't break down beta branched chain amino acids
26
What AA does epinephrine come from? What are the steps?
Tyrosine goes to epinephrine Steps: Tyr --\> DOPA---\> NE----\> Epi
27
What is the cofactor needed to turn epi into NE?
S-adenosylhomocystein
28
What AA does melanin come from? What is phenomelanin?
Melanin comes from tyrosine Phenomelanin contains cystine and is reponsible for red hair
29
What is a quick way for your muscles to generate ATP?
The body can resynthesize ATP from ADP with the use of phosphocreatine through a reversible reaction with creatine kinase
30
What is a BUN test?
A BUn test is a blood test done to see how well your kidneys are working Normal creatine ratio is 10: 1 or 15:1 If you have heart failure, or diet high in protein, higher bun ratio If you have liver damage: lower bun ratio
31
What prevents damage caused by reactive oxygen species such as free radicals and peroxides?
Glutathione
32
What is the function of glutamate dehydrogenase Function of aminotransferase? Cofactor of aminotransferase?
Glutamate dehydrogenase: catalyzes ammonia Aminotransferase: catalyze transfer of amino groups from aa's to alpha keto acids Pyridoxal Phosphate is the cofactor for aminotransferase
33
What are the amino acids that are ketogenic and glucogenic?
Both keto and gluco: PITTT Phenylalanine, Isoleucine, Threonine, Tyrosine, Tryptophan