Exam 3 Flashcards
describe the mitochondria
- produces most of the energy (ATP)
- double lipid bilayer
- contains own set of DNA
where does the citric acid cycle occur in the mitochondria?
matrix
where does the ETC occur in the mitochondria?
inner surface of cell membrane
what are the folds called in the inner membrane of the mitochondria?
cristae
what is the purpose of cristae?
increase surface area
define metabolism
the sum of all the chemical reactions that take place in an organism
define catabolism
break down, release energy
define anabolism
building larger molecules
define activation
process that starts/increases the action of an enzyme
define inhibition
any process that slows or stops the action of an enzyme
define feedback and allosteric
enzyme regulation
what are the three major types pathways?
- a linear sequence
- a cyclic sequence
- a spiral sequence
4 stages of metabolism
- digestion
- acetyl-coa production
- citric acid cycle
- ATP production
Explain Stage 1 of Metabolism: Digestion
- breaking down food
- enzymes in saliva, stomach, and si
- carbs break down into glucose
- proteins break down into AA and tryglyceride
- small molecules go into the blood for transport
Explain Stage 2 of Metabolism: Acetyl-CoA Production
- break carbon atoms into 2 carbon acetyl groups
- acetyl groups attach to coenzyme A by a bond between sulfur of the thiol group (cysteine)
- acetyl-coa is the intermediate in the metabolism of all food molecules
Explain Stage 3 of Metabolism: Citric Acid Cycle
- within the mitochondrion
- break down acetyl-coa to produce energy equivalents (FADH2 and NADH)
Explain Stage 4 of Metabolism: ATP Production
- energy production
- produce ATP and H2O from NADH and FADH2
calorie vs Calorie
1 calorie = 1000 kcal/Calorie
deine calorie (small c)
unit of heat measurement
- amount of energy to raise the temp of one gram of water one degree Celsius
define basal metabolism
energy used by a body at rest to maintain involuntary, life supporting processes
examples of basal metabolism
breathing, heart beating, growing new cells, maintaining body temperature
how much of our bodies energy goes to basal metabolism?
2/3
minimum amount of energy expenditure per unit time to stay alive for males
1 kcal/hr/kg
minimum amount of energy expenditure per unit time to stay alive for females
0.95 kcal/hr/kg
why do taller people have a higher basal metabolism regulation (BMR)?
more surface area means more heat lost from the body, which causes the metabolism to speed up in order to maintain body temperature
2 major types of energy carriers
- ATP (adenosine triphosphate)
- reduced coenzymes (FAD/FADH2 + NAD+/NADH)
define FAD
flavin adenine dinucleotide
define NAD+
nicotinamide adenine dinucleotide
What is ATP?
the body’s energy transporting molecule
ATP to ADP: exergonic or endergonic
exergonic
- gibs free energy = negative
ADP to ATP: exergonic or endergonic
endergonic
- gibs free energy = positive
how much ATP do humans use at rest per day?
45 kg / 99 lbs
define coupled reactions
- energetically unfavorable reactions are coupled to energetically favorable reactions so the overall energy change is favorable
- allows energy stored in one chemical compound to be transferred to other compounds
where does excess energy go in a coupled reaction?
releases as heat and contributes to maintaining body temperature
example of coupled reactions: glycolysis
the phosphorylation of glucose is unfavorable BUT can be made more favorable if coupled with the hydrolysis of ATP
- glycolysis: Gibbs free energy = +3.3 kcal/mol
- ATP: Gibbs free energy = -7.3 kcal/mol
define oxidation
lose elections, more O bonds –> C bonds
define reduction
gain elections, less O bonds –> H bonds
NAD+ is reduced to ______
NADH
NADH is oxidized to _________
NAD+ and 2H+
what is NAD/NADH used for?
add H to substates (reducing agent)
FAD is reduced to ______
FADH2
coenzyme vs electron carrier
because the reduced coenzymes have picked up electrons (in H bonds) that are passed along in subsequent reactions they are often referred to as electron carriers
define citric acid cycle
a series of biochemical reactions that breaks down acetyl groups to produce energy carried by reduced coenzymes and CO2
what is the first step and product of the citric acid cycle?
oxaloacetate
Citric Acid Cycle: Step 1
acetyl group is transferred from acetyl-coa to oxaloacetate produced in step 8
Citric Acid Cycle: Step 3
isocitrate loses CO2 and is oxidized to yield alpha-ketoglutarate
Citric Acid Cycle: Step 8
the cycle of reactions is completed by oxidation of malate to regenerate ocaloacetate
Citric Acid Cycle: outputs
NADH (3), FADH2 (1), GTP/ATP (1)
how many steps are in the citric acid cycle?
8
what is the reformed starting material for every cycle of the citric acid cycle?
oxaloacetate
Citric Acid Cycle: co-product
CO2 (2)
why is acetyl-coa important?
it is a favorable release of energy
Citric Acid Cycle: Steps 3, 4, 8
NAD+ is reduced to NADH and H+
(there are 3 NADH and H+ produced in one cycle)
Citric Acid Cycle: Step 6
FAD is reduced to FADH2
(there is one FADH2 produced in one cycle)
Citric Acid Cycle: Step 5
GDP —-> GTP/ATP
(one ATP produced in one cycle)
how is the citric acid cycle regulated?
- regulated by the bodies need for ATP
- ADP accumulation activates it
how to slow down ATP production?
NADH is present in excess and acts as an inhibitor of isocitrate dehydrogenase
Citric Acid Cycle: in
- Acetyl-CoA
- GDP
- CoA
- (NAD+ and FAD)
where does the citric acid cycle occur?
in the matrix of the mitochondria
where do the reduced coenzymes (NADH and FADH2) come from for the ETC?
the citric acid cycle donates FADH2 and NADH
in the ETC what reactions occur to release energy?
oxidation-reduction reactions
is the ETC exergonic or endergonic?
each reaction in the series is exergonic (favorable)
where does the ETC occur?
the inner membrane of the mitochondria
what is the hydrogen gradient?
the H+ gradient is between the inner and outer membrane of the mitochondria, it takes energy to flow back into the membrane and the energy is captured during the ETC
what are the electron acceptors in the ETC?
- cytochromes
- quinones
how many complexes are in the ETC?
4
what is the function of the complexes in the ETC?
- contains electron carriers
- each complex is at a lower energy level
what is the final acceptor of the ETC?
O2
(aerobic respiration)
what is oxidative phosphorylation?
the synthesis of ATP from ADP using energy released in the ETC
what is the ATP Synthase? How does it produce energy?
- an enzyme complex
- H ions return through the matrix by going through the ATP synthase releasing potential energy as they move through the concentration gradient driving ADP phosphorylation (creating ATP)
Where does glycolysis occur?
cytoplasm
Where does the citric acid cycle occur in the mitochondria?
matrix
Where does glycolysis occur?
cytosol
reactants of glycolysis
- glucose
- ADP
- ATP
- NAD+
reactants of the citric acid cycle
- pyruvate
- NAD+
- FAD
reactants of the ETC
- O2
- FADH2
- NADH
products of glycolysis
- pyruvate
- ATP
- NADH
products of the citric acid cycle
- ATP
- CO2
- NADH
- FADH2
products of the ETC
- ATP
- H2O
how many ATP produced from glycolysis per 1 glucose?
2 ATP
how many ATP produced from citric acid cycle per 1 glucose?
2 ATP
how many ATP produced from the ETC per 1 glucose?
32 ATP
define glycolysis
the biochemical pathway that breaks down a molecule of glucose into 2 molecules of pyruvate plus energy (2 ATP and 2 NADH)
what is alpha amylase?
- an enzyme that breaks glycosidic bonds in carbohydrates (used in the first step of metabolism: digestion)
when alpha amylase is produced in the salivary glands where is it released?
the mouth
when alpha amylase is produced in the pancreas where is it released?
the small intestine
what is the major fuel for our body?
glucose
what is glucose turned into once entering a cell?
glucose-6-phosphate
is glucose-6-phosphate exergonic or endergonic?
exergonic
what happens to glucose after turning into glucose-6-phosphate? can it leave the cell?
because it is phosphorylated it cannot cross the cell membrane, thus trapping it inside the cell
what animal tissues is glucose a major source for?
- embryo
- nervous system
- kidney
- brain
- RBC
- tumors
how can plants use glucose?
the cell wall
why would drugs target the glucose in bacteria?
glucose is used to make the bacterias cell wall
how many total steps of glycolysis?
10 enzyme catalyzed reactions
glycolysis products
- 2 pyruvate
- 2 ATP
- 2 NADH and H+
- (2 H2O)
glycolysis reactants
- glucose
- 2 NAD+
- 2 HOPO3^2-
- 2 ADP
what is step one of glycolysis?
phosphorylation
- adding a phosphate group to glucose in the 6th position
- requires ATP
define hexokinase
enzyme assisting in the production of glucose-6-phosphate
what is the allosteric inhibitor of hexokinase?
glucose-6-phosphate
what are the three things that glucose-6-phosphate can do?
- glycolysis –> made into pyruvate
- liver –> glycogen
- pentose phosphate pathway –> DNA + RNA precursor
how many ATP total from aerobic respiration?
38 ATP
what are three major monosaccharides?
- d-fructose
- d-galactose
- d-mannose
what happens to other sugars that enter the body?
they are converted to glucose and eventually join the glycolysis pathway
what is fruit sugar?
fructose
what is milk sugar?
galactose
what is starches/legumes sugars?
mannose
which sugar enters upstream of glucose-6-phosphate?
galactose
which sugar enters after glucose-6-phosphate?
fructose (enters as fructose-6-phosphate)