Exam 2 Flashcards
Types of Regulation
Allosteric, Covalent, Induction, Directional shift.
Allosteric
Affects how well the enzyme works. Effectors bind the enzyme (not covalent / not at active site) and either helps or inhibits reaction by:
Helping or hurting substrate binding to enzyme or enzyme activity. NADH/+ ratio affects several allosteric enzymes. Catalyze undirectional, non-reversible reactions
Induction
More enzyme protein is made when inducer is present (alcohol example). Allows for more product to be made and allows body to react to changing circumstances. Sometimes hormones use this mechanism.
Covalent Modification
Binds enzymes covalently (usually phosphate) which affects activity +/-. Occasionally used by hormones and mediated by cAMP
Directional Shift
Direction of a reversible enzyme is often affected by the concentration of r/p; consider glucose-1-phosphate or glucose-6-phosphate.
Phosphorylation of Glucose
Glucose + ATP -> glucose-6-phosphate + ADP
If in Liver Tissue, rxn is catalyzed by Glucokinase (Hexokinase type 4) - high Km and inducible by insulin
If in Muscle Tissue, rxn catalyzed by hexokinase (type 1 and 2) - low Km and inhibited by glucose-6-phosphate
When a cell needs to generate energy or deposit glucose
glucose first needs to be inside of the cell
Km
= [substrate] at half maximum velocity
Glycolysis
Process that oxidizes glucose into 2 units of pyruvate. 2 units of ATP are initially invested, but four are generated along with 2 NADH as byproducts. Aerobic -> pyruvate, anaerobic -> lactate
What happens to NADH generated in the cytosol during glycolysis (Anaerobic)
Used to regenerate NAD+ and maintain glycolysis
What happens to NADH generated in the cytosol during glycolysis (Aerobic)
NADH travels to mitochondria through one of two shuttles (because NADH cannot travel through mitochondrial inner membrane). Malate - Apartate, and Glycerol 3-phosphate shuttle
Malate - Aspartate Shuttle
Cytosol:
Apartate > (a-ketoglutarate > > glutamate) > Oxaloacetate > ( NADH + H+»_space; NAD+) > Malate then crosses over.
The reverse occurs in the matrix then crosses back to cytosol.
Regenerates NADH so more energy than the other shuttle
Glycerol 3-phosphate Shuttle
Glycerol-3-phosphate gets converted back to dihydroxyacetone phosphate by a membrane-bound mitochondrial glycerol-3-phosphate dehydrogenase 2, reducing one molecule of enzyme-bound FAD to FADH2. FADH2 then reduces ubiquinone to ubiquinol, which enters into oxidative phosphorylation.
Regenerates FADH so ultimately less energy that it’s counterpart.
Glycogenesis
Synthesis of glycogen, occurs in cytoplasm. Requires 1 unit of ATP, UTP/molecule of glucose.
Glycogenolysis
Breakdown of glycogen to form glucose-1-phosphate in cytoplasm
glycogen n + Pi glucose-1-phosphate + glycogen (n-1)
(glycogen phosphorylase, which hydrolyzes alpha 1,4 links, repeated until branch is only four glucose units in length)
Which hormone(s) favor glycogenesis
insulin
Which hormone(s) favor glycogenolysis
glucagon (affects liver) or
epinephrine (affects muscle)