Cytoskeleton Flashcards
what is the cytoskeleton
a network of interconnected filaments and tubules
list four functions of the cytoskeleton
cell structure and mechanics
force generation for motility
cell division
intracellular transport
what are the three major structural elements making up the cytoskeleton
microtubules, microfilaments and intermediate filaments
out of the three major structural elements making up the cytoskeleton which is the largest and which is the smallest
the largest are the microtubules and the smallest are the microfilaments
what are the monomers making up the microtubules called
alpha tubulin and beta tubulin
how many protofilaments are in the wall of a microtubule
13
what is the outer diameter of a microtubule
25nm
what is the inner diameter of a microtubule
15nm
one end of a microtubule is usually attached to a single microtubule organising centre which is the
centrosome
microtubules have a +ve and a -ve end so they are said to have
polarity
microfilaments are the thinnest of the three types of fibres, what is the size
7nm
what are microfilaments made up of
actin
what is the free monomer making up the microfilaments called
g-actin
what is the linear polymer making up the microfilaments called
f-actin
do microfilaments have polarity
yes, one side is -ve one is +ve
what are microfilaments involved in
muscle movement, intracellular transport, maintenance of animal cell shape
do intermediate filaments have polarity
no
describe the structure of intermediate filaments
eight protofilaments joined end to end with staggered overlaps
what is the size of intermediate filaments
8-12nm
what are the two types of microtubules
cytoplasmic microtubules and axonemal microtubules
list the four functions of the cytoplasmic microtubules
regulation of cell shape, maintaining axons, formation of mitotic spindle and vesicle transport
list the two functions of the axonemal microtubules
cell motility and act as a signalling hub
what are axonemal microtubules and where are they found
they are organised and stable microtubules found in cilia, flagella and basal bodies - to which cilia and flagella attach
microtubules can have different types of microtubules, what are the three
singlet, doublet, triplet
how do microtubules form
by the addition of tubulin dimers at their ends
what are the three stages of microtubule polymerisation
nucleation, aggregation into oligomers and elongation
what charge does the beta end of a microtubule have
positive
what charge does the alpha end of a microtubule have
negative
describe the nucleation stage of microtubule formation
slow, also called the lag phase
describe the elongation phase of microtubule formation
occurs at a faster rate than the lag phase/nucleation,
the microtubule assembly is balanced by the microtubule _____ at the plateau phase/ elongation phase
disassembly
microtubule growth is dependent upon what factor
concentration
what is the critical concentration
the tubulin concentration at which microtubule assembly is exactly balanced with disassembly
when would a microtubule grow in terms of concentration
when the tubulin concentration exceeds the critical concentration
when would a microtubule depolymerise in terms of concentration
when the tubulin concentration falls blow the critical concentration
microtubules undergo polarised growth, at which pole do they grow at a faster rate
at the positive end compared to the negative end which is slower
define treadmilling
the addition of subunits at the plus end and the removal from the minus end
list two microtubule inhibitors
colchicine and nocodazole
how does colchicine act as a microtubule inhibitor
by promoting microtubule disassembly
how does nocodazole act as a microtubule inhibitor
by inhibiting microtubule assembly
how do antimitotic drugs work
by interfering with spindle assembly they inhibit cell division
antimitotic drugs are useful in the treatment of what disease
cancer
how does taxol work and what is it useful for
stabilises microtubules, causes dividing cells to arrest during mitosis, used in cancer treatment
what is the dynamic instability model
one population of microtubules grows by polymerisation at the plus end whereas another population shrinks by depolymerisation
individual microtubules can go through periods of growth and shrinkage, what is microtubule catastrophe
a switch from growth to shrinkage
individual microtubules can go through periods of growth and shrinkage, what is microtubule rescue
a sudden switch back to the growth phase
what is the function of the GTP cap
it is formed whenever a new tubulin dimer comes in - its function is to STABILISE
when new tubulin is added to the plus end what form is it added in
the GTP form
what happens to the GTP over time
over time it is hydrolysed and switches to the GDP form
what happens at low concentrations of gtp tubulin
the rate of gtp hydrolysis is high so it results in shrinkage of the cap - loss of gdp bound subunits is favoured
what happens at high tubulin concentrations
catastrophe is less likely because GTP is continually added
is the gtp cap present in rescue or catastrophe
rescue
microtubules originate from a
microtubule-organising center (mtoc)
what is the mtoc in many cells
a centrosome near the nucleus
which structure is the centrosome associated with
the centrioles
how would you describe a centrosome
large ring shaped protein complexes
what does the centrosome contain
gamma-tubulin along with gamma tubulin ring proteins GRiPs
what part of the centrosome nucleate microtubule assembly
gamma tubulin ring complexes nucleate the assembly
what are centrioles and what are they involved in
9 pairs of triplet microtubules involved in basal body formation e.g. cilia and flagella
cells without centrioles have poorly organised…
mitotic spindles
microtubule growth is regulated by proteins, list three proteins that are involved in microtubule stabilising
tau, Map2, +-TIP proteins
microtubule growth is regulated by proteins, list three proteins that are involved in microtubule destabilising
Stathmin, Catastrophins and katanins
list four roles of the microfilaments
muscle contraction, intracellular tension and cell shape, cell migration - lamellar and amoeboid movement, cytoplasmic transport
actin is a single polypeptide consisting of how many amino acids
375
actin is divided into two sub groups, muscle specific actins and nonmuscle actins, name the muscle actins and the non muscle actins
alpha actins - muscle actins. non-muscle actins - beta and gamma
what can g actin monomers reversibly polymerise into
filaments
what is f actin
two linear strands of polymerised g-actin
what is the minus end of a microfilament also called
the pointed end
what is the plus end of a microfilament also called
the barbed end
where does rapid addition of g actin take place on a microfilament
at the plus end
actin binding proteins are responsible for converting actin filaments from one form to another, what protein binds GTP actin and promotes polymerisation
profilin
actin binding proteins are responsible for converting actin filaments from one form to another, what protein binds g actin and f actin and also severs filaments
adf/cofilin
actin binding proteins are responsible for converting actin filaments from one form to another, which protein promotes nucleation and branching
arp2/3
actin binding proteins are responsible for converting actin filaments from one form to another, which protein binds g actin
thymosin beta 4
actin binding proteins are responsible for converting actin filaments from one form to another, what role do formins have
bind actin filaments and promote elongation
actin binding proteins are responsible for converting actin filaments from one form to another, what role do capping proteins have
bind the ends of a filament, prevent further loss/addition of subunits
give two examples of capping proteins
capZ and tropomoduins
list three drugs that affect the polymerisation of microfilaments
cytochalasin, latrunculin a and phalloidin
what affect does cytochalasin have on the polymerisation of microfilaments
prevents the addition of new monomers to existing microfilaments
what affect does latrunculin a have on the polymerisation of microfilaments
sequesters actin monomers and prevents their addition to microfilaments
what affect does phalloidin have on the polymerisation of microfilaments
stabilises microfilaments and prevents their depolymerisation
describe intermediate filaments in four points
the most stable, the most diverse, the least soluble and are not polarised
what is the diameter of intermediate filaments
8-12nm
describe how a dimer goes to form an intermediate filament
dimer -> tetramer -> protofilaments -> intermediate filament
give four examples of intermediate filaments
keratin, vimentin f actin, lamin f actin, desmin
what are plakins
plakins are linker proteins that connect intermediate filaments, microfilaments and microtubules
give an example of a plakin
plectin
the cytoskeleton physically links to the external environment by
adhesion receptors
what do integrin receptors link to the extracellular matrix
integrin receptors link f-actin and intermediate filaments to the extracellular matrix
what do cadherin receptors link f actin and intermediate filaments to
to other cells
what are hemi-desmosomes
dense, stable cluster of intergrins that link to keratins via plectin
what do cadherin receptors do
form homotypic interactions with other cadherions on adjacent cells
what do cadherin receptors such as e-cadherin link in the cytoplasm
link to f actin or keratin filaments in the cytoplasm
what do adherens junctions bind
f actin
what do desmosomes bind
keratin