Cytogenetic abnormalities Flashcards
endometrial stromal sarcoma
t(7;17), JAZF1-JJAZ1
alveolar RMS
t(2;13) PAX3-FOXO1
t(1;13) PAX7-FOXO1
angiomatoid fibrous histiocytoma
t(12;22) EWSR1-ATF1
t(2;22) EWSR1-CREB1
t(12;16) FUS-ATF1
alveolar soft part sarcoma
der(17)t(X;17) ASPL-TFE3 fusion
ALT/WDLPS
supernumerary ring and or marker chromosomes with amplification of 12q14-q15; Amplification of MDM2,CDK4, HMGA2 genes
clear cell sarcoma of soft parts
t(12;22) EWSR1-ATF1
t(2;22) EWSR1-CREB1
congenital infantile fibrosarcoma
t(12;15) ETV6-NTRK3
Dedifferentiated LS
supernumerary ring and/or marker chromosomes with amplification of 12q14-q15; amplification of MDM2, CDK4, HMGA2 genes
desmoid fibromatosis
trisomy 8 or 20; loss of 5q, somatic CTNNB1 or APC mutations in deep tumours
DFSP/giant cell fibroblastoma
t(17;22) EWSR1-WT1 fusion
desmoplastic small round cell tumour
t(11;22); EWSR1-WT1 fusion
elastofibroma
1q abnormalities
embryonal RMS
LOH at 11p25
gains at 2, 7, 8, 11, 12, 20, 21, 13q21, 20
loss at 1p35-p36.6, 7, 6, 9q22, 14q-21-32, 17
epithelioid hemangioendothelioma
t(1;3); WWTR1-CAMTA1 fusion
epithelioid sarcoma, proximal type
alterations of 22q11.2; biallelic inactivation of hSNF5/INI1
Ewing sarcoma/PNET
t(11;22) EWSR1-FLI1
t(21;22) EWSR1-ERG
extrarenal malignant rhabdoid tumour
alterations of 22q11.2; biallelic inactivation of hSNF2-INI1
extraskeletal myxoid chondrosarcoma
t(9;22); EWSR1-NR4A3
t(9;17); TAF2N-NR4A3
t(9;15); TCF12-NR4A3
giant cell tumour of tendon sheath/diffuse type giant cell tumours
translocations involving 1p13, including t(1;2); CSF1 fusions including CSF1-COL6A3
inflammatory myofibroblastic tumour
translocations involving 2p23; ALK fusions with variety of partners
LMS
structural alterations of 1, 7, 10, 13, 14
lipoblastoma
rearrangements of 8q12; rearrangement of PLAG1 gene
lipoma
rearrangements of 12q14-q15 and 6p21-22; del(13q12-14)
low-grade fibromyxoid sarcoma
t(7;16) FUS-CREB3L2
t(11;16) FUS-CREB3L1
malignant peripheral nerve sheath tumour
complex karyotype
myxoid/round cell liposarcoma
t(12;16); FUS-DDIT3
nasopharyngeal angiofibroma
gains of 1p, 7q, 10q, 12q, 16q, 16p, 17q, 19p, 20q, 22q
soft tissue myoepithelial tumour
translocations involving 22q12; EWSR1 fusions
synovial sarcoma
t(X;18); SSX18-SSX1/SSX2/SSX4
follicluar lymphoma
t(14;18), IGH/Bcl2
mantle cell lymphoma
t(11;14), IGH/cylcinD1
Burkitt lymphoma
t(8;14), IGH/c-myc
chronic myeloid leukemia
t(9;22), BCR/ABL
prostatic carcinoma
t(21;21), TMPRSS2/ERG
t(7;21), TMPRSS2/ETV1
t(17;21), TMPRSS2/ETV4
infantile fibrosarcoma, MASC
t(12;15), ETV6/NTRK6
Mucoepidermoid carcinoma
T(11:19); MECT1/MAML2
Infantile fibrosarcoma, cellular mesoblastic nephrons, Mammary Analogue secretory carcinoma
T(12;15); ETV6/NTRK4