Cloning And Vectors Flashcards
Three key features of cloning vector
Origin of replication
Antibiotic resistance
Unique restriction sites
1OD of DNA
1OD of RNA
1OD of ssDNA
50
40
33
Therefore [DNA] = absorbance x dilution factor x above value.
Bond between nucleotides
Phosphodiester bond
What is cloning
Insert fragment of DNA into another DNA molecule that can self replicate in order to reproduce fragment of DNA
Why clone
- Determine structure of DNA
- Sequence DNA
- express and study protein product
- Study promoter region
What is a vector?
Self replicating DNA that is independent of chromosomal DNA.
Introduction of DNA into bacteria.
TRANSFROMATION
Types of vectors
Plasmid Phages Cosmid Bacterial artificial chromosome Yeast artificial chromosome
Addition feature needed in mammalian vectors
Strong promoter (eg CMV promoter)
Types of reporters
B-gal Luciferase GFP CAT SEAP
How to prevent vector closing on itself
Phosphatase (calf intestine phosphatase) will remove 5’ phosphate.
What is directional cloning?
Use of heterologous ends. Vector cut with two different enzymes. These enzymes also used to cut insert. Ensures correct orientation.