Clinical Bacteriology Flashcards
Aerobic bacilli
Listeria
Bacillus
Anaerobic bacilli
Clostridium
Propionilbacterium
Aerobic branching filaments
Nocardia: weakly acid fast
Anaerobic branching filaments
Actinomyces: not acid fast
Catalase - cocci
Streptococcus
Catalase + cocci
Staphylococcus
Coagulase + cocci
S. aureus
Coagulase - cocci
Catalase + cocci
Staph. epidermidis
Staph. saprophyticus
Coagulase - cocci
Catalase + cocci
- Novobiocin sensitivity
Staph saprophyticus
Coagulase - cocci
Catalase + cocci
+ Novobiocin sensitivity
Staph. epidermidis
Partial hemolysis, green
Alpha hemolysis
Alpha hemolysis
S. pneumoniae: capsule!
Viridans: no capsule! : S mutans, S mitis
Alpha hemolysis
- Optochin sensitivity
Viridans: S mutans, Smitis
Complete hemolysis, clear
Group B streptococci: S. agalactiae
Group A streptococci: S.pyogenes
Complete hemolysis
+ Bacitracin sensitivity
Group B streptococci: S. agalactiae
No hemolysis
Gamma hemolytic
Gamma hemolytic
- Group D srteptococci: Enterococcus: E faecium (Ampicilin R), E faecalis (Ampicilin sensitive)
- S bovis
Enterococcus can be ___ or ____ -hemolytic
Alpha
Gamma
S aureus is ___ hemolytic
Beta: complete hemolysis
Pneumonia after influenza virus infection (flue)
S.aureus
MRSA mechanism of resistance
Altered penicillin binding protein
Toxic Shock Syndrome (TSS) is due to
Toxic Shock Synrome Toxin (TSST-1) of S.aureus: superantigen activates MHCII and TCR producing polyclonal T-cell activation
Associated with prolonged use of vaginal tampons or nasal packing
Toxic Shock Syndrome by S.aureus
Toxic Shock-Like Syndrome is due to
S.pyogenes (complication of chickenpox)
S.aureus food poisoning is due to
preformed toxin: Emesis (neurotoxin)! and non bloody diarrhea
Catalase + that does not ferment mannitol
S.epidermidis (S.aureus DOES ferment manitol)
Infects prosthetic devices (hip implant, heart valve) and IV catheters by producing biofilms
Staphylococcus epidermidis
Normal flora of skin
S.epidermidis
Normal flora of female genital tract and perneum
S.saprophyticus
Most common cause of uncomplicated UTI in young women
E.coli
Second most common cause of uncomplicated UTI in young women
S.saprophyticus
Virulence factor in S.aureus
Protein A: binds Fc-IgG
Virulence factor S.pneumoniae
IgA protease: SHN: Saureus, Haemophilus, Neisseria
S.pneumoniae is the most common responsible for
- Meningitis
- Otitis media
- Bacterial pneumonia
- Sinusitis
Rusty sputum
Pneumococcus
Sepsis in patients with sickle cell disease AND asplenic patients
S.pneumoniae
Diplococci
S.pneumoniae
Virulence of S.pneumoniae without its capsule
NO virulence
Subacute bacterial endocarditis at damaged heart valves
Viridans streptococci: S sanguinis: BLOOD
S.sanguinis makes dextrans which bind to fibrin platelet aggregates on damaged heart valves
Normal flora of the oropharynx
Viridans streptococci: S.mutans and mitis
Cause dental caries
S.pyogenes causes
- Pyogenic: pharyngitis, cellulitis, impetigo (contagioso, costras mielicéricas), erysipelas
- Toxigenic: scarlet fever, Toxic shock-like syndrome, necrotizing fasciitis
- Immunologic: rheumatic fever, glomerulonephritis
S.pyogenes virulence factor
M.protein: prevents phagocytosis but gives rise to immunological crossed reactions
Markers of recent S.pyogenes infection
Anti-streptolysin A titers
anti-DNAse B antibodies
Sand-paper rash
Scarlet Fever
Pneumonia, meningitis and sepsis in babies
S.agalactiae: Group B(babies) streptococci
Screening in pregnant woman for colonisation with S,agalactiae takes place at
35-37 weeks of gestation with rectal + vaginal swabs
Positive S.agalactiae culture in pregnancy screening
Intrapartum penicillin prophylaxis
Streptococcus bovis is responsible for
Bacteriemia: subacute endocarditis
Associated with colon cancer
Bovis in the Blood=Cancer in the colon
S.gallotycus
S.bovis type I: endocarditis
Enterococci are responsible for
UTI
Biliary tract infections
Subacute endocarditis after GI/GU procedure
VRE enterococci
Nosocomial infections
Can grow in 6.5% NaCl medium and bile
Enterococci
Only bacterium with polypeptide capsule
Bacillus anthracis
Medusa head colonies
Bacillus anthracis (halo)
Painless papule sourrounded by vesicles that becomes an ulcer with black eschar
Cutaneous anthrax
Woolsorter’s disease
Pulmonary anthrax
Reheated rice syndrome
Bacillus cereus
Tetanus signs
- Spastic paralysis
- Trismus: lockjaw
- Risus sardonicus: raised eyebrows and open grin
- Opisthotonos: spasms of spinal extensors
Prevent tetanus
Tetanus vaccine
Treat tetanus
Antitoxin
+- Vaccine booster
Diazepam: for muscle spasms
Wound debridement
Botulism in adults is due to
Ingestion of preformed toxin
Botulim in babies is due to
Ingestion of spores: food, juice and honey: FLOPPY baby syndrome
Treatment of botulism
Antitoxin
Symptoms of botulism
4 D
- Diplopia
- Dysarthria
- Dysphagia
- Dyspnea
Local botox injections used for
- Focal dystonia
- Achalasia
- Muscle spasms
- Facial wrinkles
Gas gangrene
C perfringens
C perfringens produces two toxins
Alpha toxin: phospholipase: gas gangrene
Enterotoxin: food poisoning
Pseudomembranous colitis is often secondary to antibiotic use, specially
Clindamycin
Ampicillin
Associated with proton pump inhibitors
Pseudomembranous colitis by C.difficile
Cdifficile toxins
A: enterotoxin: alters fluid secretion in brush border
B: cytotoxin, disrupts cytoskeleton: actin depolymerization
Pseudomembranous colitis by C.difficile diagnosis
Detection of one or both toxins in stool by:
- Antigen detection
- PCR
Treatment of Pseudomembranous colitis by C.difficile
Metronidazol
Oral vancomycin
Recurrent cases: repeat prior regimen/Fidaxomicin/Fecal microbiota transplant
Pseudomembranous pharyngitis
Lymphadenopathy
Myocarditis
Arrythmias
Corynebacterium diphteriae
Prevention of diphtheria
Toxoid vaccine
Test for diphtheria toxin
Elek test
Lab diagnosis of diphteria
Gram + rods with metachromatic granules
Inhibits protein synthesis via ADP-ribosylation of elongation factor 2
Corynebacterium diphtheriae toxin
Tumbling motility in broth
Listeria monocytogenes
Treatment against Listeria monocytogenes
Ampicillin
Rocket tails
Listeria monocytogenes
Unpasteurised dairy products
Cold deli meats
listeria monocytogenes
Granulomatosis infantiseptica Neonatal meningitis Meningitis in immunocompromised Gastroenteritis in healthy individuals Amnionitis, septicemia and spontaneous abortion
Listeria monocytogenes
Actinomyces is an ____erobe
Anaerobe
Nocardia is an ____erobe
Aerobe
Nocardia is found in
Soil
Actinomyces is found in
Normal oral, reproductive and GI flora
Nocardia and Acid fast
Weak
Actynomyces and Acid fast
NOT acid fast
Nocardia causes
- Pulmonary infectinos in immunocompromised=mimic TBC
- Cutaneous infections after trauma in immunocompetent
- Can spread to CNS
Treatment of nocardia
Sulfonamides: TMP-SMX
Treatment of actinomyces
Penicillin
Actinomyces causes
- Oral/Facial abscesses that drain through sinus tracts associated with Dental caries/extraction
Gohn complex
Primary tuberculosis: Hiliar nodes + Ghon focus
Gohn focus is usually located in
Mid-Lower Lobes
Primary tuberculosis history
90% Healing by fibrosis and calcification: may produce 2º tuberculosis in reactivation
10%Progressive primary tuberculosis (AIDS, malnutrition): bacteriemia and progressive lung disease
IGRA vs PPD
IGRA has fewer false positive from BCG vaccination
PPD negative
No infection
Sarcoidosis
HIV with low CD4 + account
Caseating granulomas are characteristic of
2ª tuberculosis
Caseating granulomas
Central necrosis
Flanking Langhans giant cells
Mycobacterium avium causes
Disseminated disease in AIDS
Mycobacterium avium prophylaxis
Azithromycin when CD4+ count <50 cells/mm3
Hand infection in aquarium handlers
Mycobacterium marinum
Acid fast organisms
Mycobacteria
M scrofulaceum causes
Cervical lymphadenitis in children
TB symptoms
- Fever
- Night sweats
- Weight loss
- Cough
- Hempoptysis
Leprosy (hansen disease) cause
Mycobacterium leprae
Leprosy symptoms
Mycobacterium leprae infects skin and superficial nerves: gloves and stocking loss of sensation
Mycobacterium leprae likes ____ temperatures
Cool
Diagnosis of Mycobacterium leprae
Skin biopsy
Tissue PCR
Reservoir of Mycobacterium leprae in the United States
Armadillos
Forms of Hansen Disease
- Lepromatous:
- Diffusely over skin, lion like face
- Communicable
- Lethal
- Low cell mediated immunity with humoral Th2 response - Tuberculoid:
- Hypoesthetic, hairless skin plaques
- High cell mediated immunitu and Th1 type response
Treatment of Hansen disease
Tuberculoid form: Dapsone + Rifampicin
lepromatous form: Clofazimine
Gram - Diplococci
Neisseria:
-(M)eningitidis: (M)altose utilization +
-gonorrhoeae: maltose -
Moraxella: maltose -
Gram - cocobacilli
- Haemophilus influenzae
- Bordetella pertussis
- Pasteurella
- Brucella
- Francisella tularensis