Chemistry 2 Flashcards

1
Q

Give some examples of slow and fast reactions

Value of k (rate constant). When k is large the reaction is fast. True or false

Under what conditions will the reaction occur spontaneously?

How far does the reaction proceed?

Kinetics: Important Questions
• How fast/slow do chemical reactions occur? • How can I control a chemical rate?
• What factors affect reaction rates?
• How does the reaction occur (what is the reaction mechanism )?

A

Slow
rusting (oxidation of Fe metal) – corrosion of Fe
smoldering of peat (slow, low-temperature combustion)
browning of fruit and vegetables (enzymatic oxidation of polyphenols)

• Fast
explosions:
detonation of nitroglycerin in dynamite alkaline metals + water

chemiluminescence:
A + B➡️[AB]➡️[AB] + hv
light produced by a chemical reaction: glowsticks, fireflies etc.

Under what conditions will the reaction occur spontaneously?
– Thermodynamics (we’ll explore this in Ch. 19)
– Enthalpy (ΔH), entropy (ΔS), Gibbs free energy (ΔG)

• How far does the reaction proceed?
– Equilibrium (Principles I material: review Ch. 15)
– Value of K or Keq
(special cases: Keq – acid dissociation; Ksp – precipitation).

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2
Q

What factors affect the speed of a reaction

More about methanol combustion: http://www.youtube.com/watch?v=FSdBB1vBDKY

For platinum catalyst oxidation of
Methanol Combustion (oscillating flame reaction)
2CH3OH + 3O2➡️2CO2 + 4H2O
What fast reaction occurs when b methanol and oxygen are available at room temperature and K for a combustion in dish

Both reactants have to be present for the reaction to occur.
Once the oxygen inside the flask is used up ___________________ will occur until more O2 molecules flow into the flask for combustion in a flask

The flask has been cooled down on
ice. The reaction will ___________________ at low T.
For cold methanol

Pt Wire + Flask + Methanol
Pt catalyzes the reaction as long as ____________ reactants are present.

A

What factors affect the speed of a reaction?

  1. Physical State
    eg. fine powder vs solid block vs gas vs liquid
  2. Reactant Concentration eg. dilute vs concentrated
  3. Reaction Temperature eg. hot vs cold
  4. Catalysts eg. alcohol sensitivity related to aldehyde dehydrogenase

These are macroscopic variables with submicroscopic causes. Objectives: We need to be (1) quantitative and (2) to develop
insight and understanding

Combustion

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3
Q

What are reaction rates
What are the units
What is the formula for average rate for formation of products
What is the formula for average rate of loss of reactants

Calculate the average rate of the hypothetical reaction,
Red → 2Blue
for the first 10.0 seconds of the reaction.
time = 0.0 s 10.0 s
[Red]= 0.08M 0.04M
[Blue] = 0.00 M 0.08 M

A

Reaction rate - change in the concentration of reactants or products per unit time.

Reaction Rate = the change in concentration per unit time taking into account stoichiometry and reaction direction. – Units are typically in M/s (molarity per second)
For a generic reaction:
aA+bB→cC+dD
Rate =-1/a x delta A/delta t= -1/b x delta B/delta t=1/c x delta C/delta t=1/d x delta D/delta t
(These are related to the slopes for the graph)

Δ[ ] = change in concentration
Δt = change in time
a, b, c, d = stoichiometric coefficients Note:
• minus sign for reactants
• plus sign for products so that the rate of the reaction is always positive.

• Consider also the reaction
A→B

average rate of appearance of B= Δ[B]Δt

average rate of disappearance of A=
− (Δ[A]/Δt)

Formation of products:
Average Rate = Δc/Δt
Δc/Δt > 0
(increasing concentration with time)

Average Rate for Loss of Reactants
Average Rate = -Δc/Δt
Δc/Δt < 0
(concentration decreases with time; negative sign ensures that the rate is positive)

Average rate [A]final - [A]initial/tfinal – tinitial
= Δ[A]/Δt
[A]initial is not necessarily [A] at time 0

Instantaneous rate slope of the tangent to the curve
(rate at an arbitrarily short time) Initial rate slope near time = 0

At Δ[A]➡️d[A], the average rate➡️instantaneous rate.

Reactant)Red → 2Blue(product)
red] = 0.08M 0.04M 0.02M 0.01M
blue] = 0.00 M 0.08 M 0.12 M 0.14 M

Objectives:
1. Understand that rate is associated with the slope of the
concentration vs time plots.
2.Appreciate how stoichiometry can influence the rate and must be
accounted for in defining the rate of the reaction.
3. Be able to discuss how rate changes with time.

Rate=−1/1multiplied by Δ[Red]/Δt
=−1/1 multiplied by (0.04−0.08)/ (10.0−0.0)s
=0.004M/s

Rate=+1/2 multiplied by Δ[Blue]/Δt =+1/2(0.08−0.00)M/(10.0−0.0)s
=0.004M/s

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4
Q

What is the form of the rate law?

O3(g) + 2NO2(g) → O2(g) + N2O5(g) Rate = k[O3][NO2]

This reaction is 1st order with respect to O3, 1st order with respect to NO2, and 2nd order overall.

2 NO2(g) → 2 NO(g) + O2(g) 
Rate = k[NO2]to the power 2

• ___________ with respect to NO2, and 2nd order overall.

(CH3)3CCI + OH- → (CH3)3COH + Cl- Rate = k[(CH3)3CCI]
• This reaction is ___________with respect to (CH3)3CCI, 0th order with respect to ________, and ______________ overall.

What is the unit of the rate constants for first order reaction and second order reaction

What is the Strategy for Determining Rate Law Using Initial Rates

Consider the reaction and the kinetic data in the table:
2 N2O5 (g) → 4 NO2 (g) + O2 (g) (in CCl4 solvent)
Exp. No.
1 
2
[N2O5]o (mol/L) 
0.45 M
0.90 M
Initial Rate (molL-1⋅s-1) 
2.7 × 10-4
5.4 × 10-4
 Using the experimental data in the table, determine the rate law.
Rate = k[N2O5]to the power m What is “m”?
 Question 2
Consider the reaction and the kinetic data in the table:
2 NOCl(g) → 2 NO(g) + Cl2 (g)
 Exp. No.
1 
2
[NOCl]o (mol/L) 
0.0033 M
0.0066 M
Initial Rate (mol⋅L-1⋅s-1) 
2.7 × 10-4
1.08 × 10-3
A

For a generic chemical reaction,
aA + bB → cC + dD
the rate law generally has the form: Rate = k[A]raised to the power m[B]raised to the power n
• k is the rate constant (k depends on the temperature).
• The exponents define the order of the reaction:
• m is the order of the reaction with respect to A.
• n is the order of the reaction with respect to B.
• (m + n) is the overall reaction order.
• m and n do not necessarily equal a and b!
• m and n are usually integers.

Units of rate = (units of rate constant)multiplied by (units of concentration)raised to the power the order
Examples:
First order reaction
Units of rate = rate constant x concentration
Units of rate constant = units of rate /concentration
=M/s/M
= s raised to the power -1

Second order reaction
Units of rate = rate constant x (concentration) to the power 2

Units of rate constant = Units of Rate/concentration to the power 2
= M /s/M to the power 2
= M to the power −1 s to the power −1

How are rate laws determined?
Remember: Rate laws must be determined experimentally.
method of initial rates = determines reaction orders from the effect of changing a reactant’s concentration on the initial rate of the reaction

Rate = k[A]to the power m[B]to the power

Solution:

When concentration doubles, the rate doubles so m = 1 and the reaction is first order.

Rate = k [N2O5]

Exmaple 2 solution
Rate 2/Rate 1= 1.08 × 10-3/2.7 × 10-4
= 4

[NOCl]to the power m exp1/ [NOCl]to the power m exp2
=[0.0066]to the power m / [0.0033]to the power m
=(2) to the power m
m=2

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5
Q

Question 3 on using method of initial rates

Deduce the rate law for the reaction,
BrO3-(aq) + 5 Br-(aq) + 6 H+(aq) → 3 Br2(l) + 3 H2O(l) from the following experimental data:
 Exp.
 1
2
3
4
[BrO3-]o 
0.10M
0.20M 
0.20M 
0.10M
[Br-]o 
0.10M 
0.10M
0.20M
0.10M

[H+]o

  1. 10M
  2. 10M
  3. 10M
  4. 20M
Initial Rate (mol⋅L-1⋅s-1) 
8.0 × 10-4
1.6 × 10-3 
3.2 × 10-3 
3.2 × 10-3
 Assume a rate law of the form: 
Rate = k[BrO3-]n[Br-]m[H+]p
• What is your strategy?
• What do you notice about the experimental design, i.e. the pattern of concentrations?
A
Determine n by examining data from Experiments 1 & 2
  Exp.
1 
2
[BrO3-]o 
0.10M
0.20M
[Br-]o 
0.10M
0.10M
[H+]o 
0.10M
0.10M
Initial Rate (mol⋅L-1⋅s-1) 
8.0 × 10-4
1.6 × 10-3

Rate 2/Rate 1=

16×10−4 M/s /8.0×10−4 M/s
= 2.0
If, Rate = k [BrO3-]n [Br-]m [H+]p then

Rate 2/Rate1 = k(0.20 M)n (0.10 M) m(0.10 M)p divided by k(0.10 M)n (0.10 M) m(0.10 M)p
=(2.0)raised to the power n
2.0 is = to (2.0)raised to the power n
n=1

Determine p and m from Experiments 1 & 4 and 2 & 3 respectively
  Exp. 
1
2
3
4
[BrO3-]o 
0.10M
0.20M
 0.20M
 0.10M
[Br-]o
0.10M 
0.10M
0.10M
0.20M 
 [H+]o 
0.10M
0.10M
0.10M 
0.20M
Initial Rate (mol⋅L-1⋅s-1) 
8.0 × 10-4
1.6 × 10-3 
3.2 × 10-3
 3.2 × 10-3
Solution: Assume a rate law of the form, Rate = k[BrO3-]n[Br-]m[H+]p
Exp 1 & 2 ⇒ n = 1 
Exp2&3⇒ m=1 
Exp1&4⇒ p=2
Rate =\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_
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6
Q

What are integrated rate laws
Solve this At 500°C, cyclopropane forms propene in a first-order reaction with rate constant 6.7 × 10-4 s-1. If initially the concentration of cyclopropane is 0.25 M, what is its concentration after 10.0 minutes?

A

Equations expressing the relationship between concentration and time can be derived using calculus.
• The resulting equations depend on the rate law used and are called integrated rate laws.
First-Order Reaction: A → products
Rate = delta [A]/delta t
=k[A]
Using calculus,
Integrated rate law is gotten :
In[A]subscript t -In[A]subscriptnaught = -kt
Or In[A]subscript t/In[A]subscriptnaught
=-kt

ln[A]t = natural log of the molarity of A after t seconds 
k⋅t = the rate constant times the elapsed time
ln[A]o = natural log of the molarity of A at t = 0.0

InB/A=InA − l n B
ln(A to the power n ) = n ln A

ln( AxB) = ln A + ln B
ln(eraised to the powerx) =x

For First Order Reactions:
ln[A]t =−kt+ln[A]0

In[A]subscript t/In[A]subscriptnaught =-kt

In[A]subscript t=[A]subscript naught e superscript -kt

Solution: ln[A]t = -k⋅t + ln[A]o
ln[A] = -(6.7 × 10-4 s-1)(600. s) + ln(0.25) ln[A] = -1.788
[A] = antiloge(-1.788) = e-1.788 = 0.17 M
Use eto the power x key

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7
Q

What is the physical meaning of the rate law

A

Rate = k[A]m[B]n
• Connection - rate constant, k
larger k => faster reaction
• Order of the reaction (m and n): how ‘sensitive’ the rate of reaction is to the concentrations of A and B, respectively.

In Example 3:
BrO3-(aq) + 5 Br-(aq) + 6 H+(aq) → 3 Br2(l) + 3 H2O(l)
Rate = k[BrO3-][Br-][H+]2
• Out of the 3 reactants, increasing [H+] will have the _________ effect on the rate of reaction (2nd order in H+) .

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8
Q

What other method can be used to determine the order of a reaction and determining the Rate constant
How is it done
How will you know if a graph is first order or second order

How do you know if a reaction is zero first or second-order?
If an increase in reactant increases the half life, the reaction has zero-order kinetics. If it has no effect, it has first-order kinetics. If the increase in reactant decreases the half life, the reaction has second-order kinetics.
True or false

A

Graphical method

Obtaining a straight line:
treat,
ln[A]t = -k ⋅ t. +. ln[A]o

as. y. =. m⋅x + b
and plot a graph
First order

For second order:

Rate = − Δ[A]/delta t= k [A]to the power2
By integration or calculus,it becomes

1/[A]subscript t=kt. +. 1/[A]subscripto
y. = mx. +. b. Line

For determining the rate constant k,

If: ln[A]t = -k ⋅ t + ln[A]o
( y = m⋅x + b )

Then, a graph of ln[A]t versus time has slope m = - k and intercept b = ln[A]o

So the slope =-k
k=-the slope

you get a straight line with a negative slope, then that would be first order. For second order, if you graph the inverse of the concentration A versus time, you get a positive straight line with a positive slope, then you know it’s second order.

In order to determine the rate law for a reaction from a set of data consisting of concentration (or the values of some function of concentration) versus time, make three graphs.

[A] versus t (linear for a zero order reaction)
ln [A] versus t (linear for a 1st order reaction)
1 / [A] versus t (linear for a 2nd order reaction)
The graph that is linear indicates the order of the reaction with respect to A. Then, you can choose the correct rate equation:

For a zero order reaction,	rate = k	
(k = - slope of line)
For a 1st order reaction,	rate = k[A]	
(k = - slope of line)
For a 2nd order reaction rate = k[A]2	(k = slope of line)
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9
Q

How long will it take for 75% of AB to decompose if the initial
concentration is 1.50 M and k = 0.20 L/mol•s?
For a zero order rate law what’s the equation
What is half life
What is the half life for zero order,first and second order

Points to Remember:
1. Subsequent half lives
get shorter for zeroth order, do not change for first order, and get longer for second order.
2. The values necessary to find k can be read off of the graph.
3. t1/2 provides a third method for determining order.
True ir false

A

Second-Order Reaction
A chemical decomposes by a second-order reaction (rate=k[AB]2),
AB(g) → A(g) + B(g)

1/[A]subscript t=kt. +. 1/[A]subscripto

[A]subscript t= 1.5 − 0.75(1.5) = 0.375 M

t=(1/[A]subscript t — 1/[A]subscripto)multiplied by 1/k
=(1/0.375–1/1.5)multiplied by 1/0.2
=10seconds

Zeroth-Order Reaction: A → products

What is the implication of the 0th order?
The rate is independent of the concentration.
[A]t = − kt +[A]o
y =mx+b

half-life = t1⁄2 = the time required for the concentration of a reactant to decrease to one half of its initial value ([A]naught➡️ [A]naught/2)

Zero:half life =[A]naught/2k
1st order:half life =0.693/k or In2/k
2nd:Half life=1/k[A]naught

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10
Q

The reaction below is first order in [H2O2]: H2O2(l)”→2H2O(l)+O2(g)
A solution originally at 0.600 M is found to be 0.075 M after 54 min. What is the half-life for this reaction in minutes?
State the relationships between the zero,first and second orders

A

Half life =ln2/k

Rate =In[A]subscript t /In[A]subscript naught =-kt
Rate=In0.075/0.600=-k(54mins)

k=-1/54 multiplied by In0.075/0.600
= 0.0385 min−1

Half life =In2/0.0385 min−1
=18mins

Rate law-
Zero: rate = -k
First: rate = -k [A]
Second: rate = -k [A]2
Units for k-
Zero: mol/L*s
First: 1/s
Second: L/mol*s
Integrated rate law in straight-line form
(from reactant A-plot)-
Zero: [A]t =
-k t + [A]0
First: ln[A]t =
-k t + ln[A]0
Second: 1/[A]t =
k t + 1/[A]0
Plot for straight line-
Zero: [A]t vs. t
First:In[A]t vs. t
Second: 1/[A]t = t
Slope,y intercept -
Zero: -k, [A]0
First: -k, In[A]0
Second:k,1/[A]0
Half life -
Zero: A]0/2k
First: ln 2/k
Second: 1/k [A]0

Objective: Understand the RELATIONSHIPS, don’t just memorize equations!

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11
Q

State the empirical methods used to check for rate law

What is the rate law

A

Useoneoftheempiricalmethods:
– Initial rates - systematically vary concentrations and observe the effect on
rate.
– Integrated rates - solve the calculus (the differential) to give a concentration versus time equation (often uses line plots).
– Half lives - use integrated rate laws solved (for time) specifically at the point where concentration is one-half the original amount.
• Theexperimentalresultsdeterminetheratelaw.
– The rate law is the mathematical expression that describes how the
reaction depends on some key factors (k, reactant concentrations):
Rate = k[A]m[B]n
• Thisishalfofour“scientificmethod”cycle;wehavean empirical law.
– But we need to develop further molecular level insight

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12
Q

What is the Collision model

A

Empirical observation: Chemical reaction rates often
increase with temperature
The Collision Model (i.e. collision theory)
Reaction rates depend on collisions, which in turn will likely depend on at least 3 factors:
• collision frequency = the number of collisions per second per liter
• collision energy = the fraction of the collisions that are sufficiently forceful
• collision orientation = the fraction of the collisions with correctly oriented molecules

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13
Q

What is activation energy

A

Consider the Reaction: A + BC → AB + C
• Collision Frequency
higher concentrations ⇒ more frequent collisions
higher temperatures ⇒ more frequent collisions
• Collision Energy
powerful collision ⇒ reaction gentle collision ⇒ no reaction
How much E is enough?

• Collision Orientation
correct alignment ⇒ reaction incorrect alignment ⇒ no reaction
How do the molecules need to orient?

Activation Energy, Ea = the minimum collision energy required for molecules to react

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14
Q

What is an exothetmic and endothermic reactions
Give examples
What is enthalpy

Distribution of Energy
• Typically, only a fraction of the molecules in a sample possess sufficient energy to react.
• The higher the temperature, the higher this fraction.
True or false

A

An endothermic reaction occurs when energy is absorbed from the surroundings in the form of heat. It occurs as a result of the dissociation of the bonds between the molecules. The energy is then released through the formation of new bonds. energy is absorbed from the surrounding into the reaction

Heat is taken up from the surroundings in such reactions, so the temperature of the system where the reaction is taking place remains cooler. Also, at the end of the reaction, the enthalpy, which is the change in heat energy during the conversion of reactants to products, increases.

Conversely, an exothermic reaction is one in which energy is released from the system into the surroundings.
The energy is released from the system to its environment.

few examples of the endothermic process are photosynthesis, evaporating liquids, melting ice, dry ice, alkanes cracking, thermal decomposition, ammonium chloride in water and much more

A few examples are neutralisation, burning a substance, reactions of fuels, deposition of dry ice, respiration, solution of sulphuric acid into water and much more.

The energy released is caused by the formation of new bonds (products) at a higher level. While the energy required to break up the bonds (reactants) is lower. At the end of the reaction, the enthalpy change decreases as well.

Enthalpy, a property of a thermodynamic system, is the sum of the system’s internal energy and the product of its pressure and volume.

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15
Q

What is the arrhenius equation

https://m.youtube.com/watch?v=dWhMlxuaIkI -how to read an energy profile diagram

The activation energy of a chemical reaction is closely related to its rate. Specifically, the higher the activation energy, the slower the chemical reaction will be.
True or false

https://www.khanacademy.org/science/ap-biology/cellular-energetics/enzyme-structure-and-catalysis/a/activation-energy

A

The Arrhenius Equation
• If the reaction rate varies with temperature, so must the rate constant, k.
• Arrhenius (1888) proposed the relationship:
k=Ae to the power -Ea/RT

k = rate constant
A = frequency factor (related to collision frequency
 and collision orientation) 
R = gas constant = 8.314 J/mol⋅K
T = temperature in kelvin
Higher T ➡️larger k ➡️increased rate
Ea=activation energy
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16
Q

Write the linear equation for Arrhenius equation

A

k=Ae to the power -Ea/RT
Then
In(k)= -Ea/R multiplied by (1/T) +In(A)
y. =. m. x. +. b

m or -Ea/R = the slope
b is the intercept

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17
Q

The decomposition of HI(g),
2HI(g) →H2(g)+I2(g)
has rate constants of 9.51x10-9 L/mol•s at 500 K and
1.1x10-5 L/mol•s at 600 K. What is Ea for this reaction?

A

In(k1)= -Ea/RT1 + InA

In(k2)= -Ea/RT2 + InA

In(k1) - In(k2)=In(k1/k2)=Ea/R(1/T2 - 1/T1)
Ea=RIn(k1/k2)(1/T2-1/T1) raised to the power -1
= 8.314J/mol•K)ln(1.1x10 to the power -5 / 9.51x10 to the power -9)(1/600 - 1/500) to the power -1
Ea=1.76x10to the power2kJ/mol

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18
Q
Example of a Reaction Mechanism
Overall reaction:
2O3(g) →3O2(g)
 2-Step Reaction Mechanism:
Step 1:O3(g)→O2(g)+O(g) 
Step 2:O3(g)+O(g)→2O2

What are the rate laws for each of the steps? What is the overall rate law?
What is rate mechanism and elementary step

State the rate law for these reactions
A➡️product 
A+A➡️product
A+B➡️product
A+A+A➡️product
A+B+C➡️product
A

reaction mechanism = the sequence of elementary steps resulting in an overall chemical reaction
elementary step = a simple reaction with a well- defined rate law that depends on the number of molecules (also, elementary reaction or elementary process)
IF a reaction equation represents an elementary step
then the reaction coefficients are related to the orders of the rate law.
58
Through mechanisms, rate laws gain chemical meaning. We do not just have a mathematical rule but more importantly molecular level insight.

Since elementary steps are simple collision processes, their rate laws are determined by their molecularity.

Rate laws:
k[A]
k[A] to the power 2
k[A][B]
k[A]squared[B]
k[A][B][C]
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19
Q

How is a mechanism judged as acceptable?
What is the rate detemrinjng step
What is reaction intermediate

Step 1: NO2(g) + F2(g) → NO2F(g) + F(g) (slow)
Step 2: NO2(g) + F(g) → NO2F(g) (fast)
Sum: 2NO2(g) + F2(g) → 2NO2F(g) Slow
Rate = k [NO2] [F2]
This is consistent with experiments. So it is a possible mechanism.

True or false

A

A mechanism must satisfy two requirements:
(1) The sum of the elementary steps must result in the overall
reaction.
(2) The mechanism must be consistent with the experimentally determined rate law.
(An experiment only provides evidence not proof.)
Rate-determining step:
• All elementary steps do not have the same rate.
• Usually one of the elementary steps is slower than the others and thus limits the overall rate of the reaction- this step is called the rate-determining step (or rate-limiting step).

  • Inamultistepmechanism,oneofthestepswillbeslower than all others.
  • Theoverallreactioncannotoccurfasterthanthisslowest, rate-determining step

Consider the overall reaction: 2 NO2(g) + F2(g) → 2 NO2F(g)
For which the “accepted” mechanism is:
Step 1: NO2(g) + F2(g) → NO2F(g) + F(g) (slow) Step 2: NO2(g) + F(g) → NO2F(g) (fast) Sum: 2 NO2(g) + F2(g) + F(g) → 2 NO2F(g) + F(g)
Reaction intermediate - a substance that is formed and used up during the overall reaction. Intermediate concentration should not appear in the rate law.

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20
Q
Mechanism with a Slow Initial Step
  NO2 (g)+CO(g)⎯⎯→NO(g)+CO2 (g)
•  Rate=k[NO2]2
•  Aproposedmechanismforthisreactionis
Step 1: NO2 + NO2 ⎯⎯→ NO3 + NO (slow)
Step 2: NO3 + CO ⎯⎯→ NO2 + CO2 (fast)
•  The NO3 intermediate is consumed in the second step.
•  SinceCOisnotinvolvedintheslow,rate-determining step, it does not appear in the rate law.
For a Mechanism with a Fast Initial Step
 Reaction: 2 NO(g) + O2(g) → 2 NO2(g)
Step 1: NO+O2 !!→NO3 (fast)
Step 2: NO3 + NO !!→ 2 NO2 (slow)
Rateoverall = Rate2 = k2 [NO3] [NO]

But, k1[NO][O2] = k-1[NO3] or Keq=[NO3] / [NO][O2]
Hence, [NO3] = k1/ksubscript-1[NO][O2]

Rate overall=k2k1/ksusbcript-1 multiplied by [NO]to the power 2[Osubscript2]
= k[NO]2[O2]

A
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21
Q
A

One possible mechanism for the decomposition of nitryl chloride, NO2Cl,is:Step 1:NO2Cl(g)#→NO2(g)+Cl(g) fast,equilibrium
Step 2:NO2Cl(g)+Cl(g)#→NO2(g)+Cl2(g)
What is the reaction intermediate? What is the rate law? Does increasing the NO2 concentration increase or decrease the reaction rate?

Solution:
Increasing the NO2 concentration, will decrease the reaction rate.

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22
Q

What is a catalyst

A

catalyst = a substance that increases the rate of a chemical reaction without undergoing permanent chemical change
Consider: The decomposition of H2O2
Uncatalyzed 2 H2O2 → 2 H2O + O2 (very slow)
Catalyzed 2H2O2 → 2 H2O + O2 (fast)
Q: Why?
Ans: A very different mechanism
Step#1: H2O2 +I- → H2O + IO-
Step#2: H2O2 +IO- → H2O + O2 + I-
Where I is the catalyst in both reactions
Sum: 2H2O2 → 2H2O + O2

Is this 2-step mechanism faster?
Yes, two small energy barriers are easier to surmount than one large energy barrier. Cuz the small energy barriers had catalysts but the bigger one didn’t

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23
Q

What are homogenous and heterogenous catalysts

A

Homogeneous vs. Heterogeneous Catalysis
homogeneous catalysis = catalyst and reactants in the same phase heterogeneous catalysis = catalyst and reactants in different phases
Examples:
Homogeneous: 2 H2O2 (aq) → 2 H2O + O2
Catalyzed but a catalyst that is aqueous

Heterogeneous: 2 H2O2 (aq) → 2 H2O + O2
In this heterogenous example the reaction was Catalyzed by a solid or liquid catalyst (for this reaction it’s MnO2)

Bio/Enzyme: 2 H2O2 (aq) → 2 H2O + O2 
catalyzed by (Enz = Catalase)

• Catalysts are extremely important in industry in the production of NH3, gasoline, plastics, and in biology, i.e. enzyme

24
Q

Methanol Combustion 2CH3OH + 3O2➡️2CO2 + 4H2O
Pt Wire + Flask + Methanol
Pt catalyzes the reaction when both reactants are present. Heterogenous
True or false

Where can catalytic converters be found?
How do they work?
What catalysts are used. ?

A

True

Heterogeneous Catalysis
• Thecatalyticconverteris found in the exhaust manifold of an automobile.
• Thecatalystconverts hydrocarbons, CO and nitrogen oxides (NOx species) into CO2, H2O and N2.
• ThecatalystusedisPtand Rh deposited on Al2O3.

25
Q

What is an enzyme

Give examples and their common mechanisms

A

enzymes = biological catalysts; most are large proteins with molar masses from 104 to 106 g/mol
Enzymes have high specificity
Lock and key model by Fischer
Hand in glove model by Koshland
Common Mechanism:
1) substrate + enzyme ⇆ enzyme-substrate complex
2) enzyme-substrate complex → enzyme + products
Enzyme Examples: Lactase (breaks down lactose, the sugar in milk)

ATP Synthase (one of the many enzymes involved in obtaining energy from food during metabolism) catalyzes ATP synthesis from ADP:
ADP + Phosphate➡️ATP + H2O
Polyphenoloxidase (speeds up oxidation of polyphenols in plant tissues
to melanin (brown compound); inactivated at high and low pH ... lemon juice on apple slices)
26
Q
Which expression correctly states the
 rate of the reaction?
N2(g) + 3 H2(g)     2 NH3(g
1.rate=-delta3[H2]/delta t
2. rate=-delta[H2]/delta t
3. rate=+delta[N2]/delta t
4. rate=+delta[NH3]/2delta t
5. rate=+delta2[NH3]/delta t
Practice Problem 2
 • Determine the rate law and the value of k for the following reaction using the data provided.
S2O8to the power 2−(aq) + 3 I−(aq) → 2 SO4to the power2−(g) + I3−(aq)
[S2O82−]i (M)
 0.30
0.44 
0.44
[I−]i (M) 
0.42 
0.42 
0.21
Initial Rate (M-1s-1) 
4.54
6.65
3.33
A) Rate = 120 M-2s-1 [S2O82−]to the power2[I−] 
B) Rate = 36 M-1s-1 [S2O82−][I−]
C) Rate = 86 M-2s-1 [S2O82−][I−]2 
D) Rate = 195 M-3s-1 [S2O82−]2[I−]2 
E) Rate = 23 M-1/2s-1 [S2O82−][I−]1/2
Practice Problem 3
 If t1/2 = 500 s for a first-order reaction, how long will it take for the concentration of a reactant to
decrease to 1/8 of its original value?
A) 2 x 500 = 1000 s 
B) 3 x 500 = 1500 s 
C) 4 x 500 = 2000 s 
D) 5 x 500 = 2500 s 
E) 8 x 500 = 4000 s
Practice Problem 4
 A reaction is found to have an activation energy of 108 kJ/mol. If the rate constant for this reaction is 4.60 × 10-6 s-1 at 275 K, what is the rate constant at 366 K?
A) 12 s-1
B) 1.7 s-1
C) 0.58 s-1
D) 5.4 × 10-5 s-1 E) 1.9 × 10-4 s-1
A
27
Q
Oscillating Chemical Reaction
 Briggs-Rauscher Reaction
(decomposition of hydrogen peroxide)
2H2O2 ➡️2H2O + O2
5H2O2 + 2IO3- + 2H+➡️I2 +5O2 +6H2O
5H2O2 + I2➡️2IO3- + 2H+ + 4H2O 
I2 concentration oscillates: I2
complex with starch is blue. 
IO3- is the catalyst for the
 reaction.
Homogeneous
True or false
A
28
Q

State three important of organic chemistry
What are the three main features of organic chemicals
State four features of carbon
State the number of groups,molecular geometry and hybridization of carbon

A
Pharmaceuticals
Solvents
Paints
Fuels
Plastics 
Clothing
Biochem 

organic chemistry = carbon-containing compounds
Three main features characterize organic chemicals: (1) their carbon skeleton
(2) their functional group(s)
(3) structural complexity, chemical diversity

Carbon (C) - General Information
• Atomicnumber,Z,is6(126C).
• Fourvalenceelectrons([He]2s2p2).
• Secondrow(period)element.
•Formsmainlycovalentbonds(maximumof4)to attain octet valency.
• Carbonatomsbondtoeachother.
•Concatenation(linkingasinachain)resultsin thousands of carbon skeletons.

Number of groups
Four groups -tetrahedral (geometry)
(Hybridization)sp3

Three groups -Trigonal Planar(geometry)
(Hybridization) sp2

Two groups-linear(geometry)
(Hybridization)sp

29
Q

What is a functional group
What are heteroatoms
What are the four families of hydrocarbons

A

• A “functional group” is an atom or a group of atoms that imparts characteristic physical and chemical properties to a molecule.
• All organic compounds have C—C and/or C—H bonds, so any other structural features tend to stand out, e.g., groups that contain:
– Heteroatoms—atoms other than C or H (e.g., N, O, S, P, F, Cl, Br) .
– π-bonds—commonly, C═C, C , and C═O .

C–C ΔEN = 0 Non polar , relatively unreactive
C–H. ΔEN = 0.4 usually unreactive
C–O ΔEN = 1.0. reactive; C electron poor, O electron rich

For
Methanol and cholesterol,they have the same functional group but different carbon skeleton

Four families:
• alkanes–containonly single covalent bond
• alkenes–containaleast one double bond
• alkynes–containatleast one triple bond
• aromatics–containrings with delocalized electrons

30
Q

What are a cyclic Alkanes
How do you draw three dimensional organic molecule structure ,for a condensed structure and for skeletal line structures
Know how to draw alkanes in these three structures. There’s a picture on the slide.

A
Alkanes, Csubscript nHsubscript2n+2
 A - Acyclic alkanes:
- contain only C and H in single covalent bonds; no rings; all
carbons sp3 hybridized (tetrahedral)
- general chemical formula CnH2n+2
- They are also known as saturated hydrocarbons (sp3 carbons are “saturated” with hydrogens)
Exmaple is methane CH4
n=1

Drawing Organic Molecules: Three-Dimensional (3-D) Structures
• A solid line is used for a bond in the plane.
• A wedge is used for a bond in front of the plane.
• A dashed line is used for a bond behind the plane.

Drawing Organic Molecules: Condensed Structures
• All atoms are drawn in, but the two-electron bond lines are generally omitted – condensed structure.
• Atoms are usually drawn next to the atoms to which they are bonded.
• Parentheses are used around the same groups.
• Lone pairs are omitted.

Drawing Organic Molecules: Skeletal (line) Structures
• Assume there is a carbon atom at the junction of any two lines or at the end of any line.
• Assume there are enough hydrogens around each carbon to make it tetravalent.
• Draw in all heteroatoms and the hydrogens directly bonded to them.

31
Q

What are th equivalent structures of alkane
Know the structural difference between straight chain and branched alkanes
What are structural or constitutional isomers and give examples

A

Equivalent Structures of Alkanes
• Forpropaneandhighermolecularweightalkanes,thecarbon skeleton can be drawn in a variety of ways and still represent the same molecule.
• Forexample,thethreecarbonsofpropanecanbedrawnina horizontal row or with a bend.
• InaLewisstructure,thebendsinacarbonchaindonotmatter.

The key difference between straight and branched chain alkanes is that in straight-chain alkanes, all the carbon atoms bond with each other forming a continuous chain whereas branched chain alkanes have side chains attached to a continuous carbon chain.

structural isomers = same molecular formula, but different bond connectivities
Example 1:
  n=4
C4H10 
butane

n=4
C4H10
2-methylpropane

Exmaple 2:
n = 5
C5H12
CH3CH2CH2CH2CH3 pentane

   n = 5
C5H12
CH3
|
CH3CHCH2CH3
2-methylbutane isopentane

n=5
C5H12

       CH3
       |
CH3CCH3 
       |
       CH3
2,2-dimethylpropane
neopentane

Look at the difference etween Their structure in the slides

32
Q

What are cycloalkanes
What is Rotation About a C-C Bond in Acyclic Alkanes
How do you classify carbon atoms in Alkanes

A

Cycloalkanes, CnH2n
- contain only C and H in single covalent bonds; at least one ring; all carbons are sp3 hybridized
- general formula CnH2n
n=3 C3H6
n=6 C6H12
n=5 C5H10
Five- and six-membered rings are most stable.
-They can take on conformations in which their bond angles are
very close to the tetrahedral angle. - Smaller rings are quite strained.

Rotation about single bonds is relatively unhindered in acyclic alkanes but hindered
in cyclic alkanes.

Carbon atoms in alkanes (and other compounds) are classified based on the number of other carbons directly bonded to them:
A primary carbon (1sr carbon) is bonded to one other carbon atom

A secondary carbon(2to the power naught) is bonded to two other carbon atoms

A tertiary carbon is bonded to three other carbon atoms

A quaternary carbon is bonded to four other carbon atoms

33
Q

How do you name organic molecules
How do you name alkanes and alkane chains
What are the first ten members of the straight chain alkanes ,state the condensed structural formula and molecular formula too
Know how to name or interpret alkanes using the skeleton structure

A
Naming Organic Molecules
IUPAC, International Union of Pure and Applied Chemistry Nomenclature:
1. Suffix
which family the molecule belongs to
2. Root/base/parent
number of carbons in longest chain
3. Prefix
location and name of substituents

Naming Alkanes

  1. The suffix “ane” identifies a molecule as an alkane.
  2. The table below gives the names for the first ten “straight chain” alkanes (a.k.a. n-alkanes; n for “normal”). It is important to learn these because many other compounds will be named after them.

Naming Alkane Chains
• Carbon substituents bonded to a long carbon chain are called “alkyl groups”.
• An alkyl group is formed (on paper) by removing one H atom from an alkane.
• To name an alkyl group, change the –ane ending of the parent alkane to –yl. Thus, methane (CH4) becomes methyl (CH3-) and ethane (CH3CH3) becomes ethyl (CH3CH2-), etc.

Summary: Name the longest continuous chain. 2) Number the longest chain starting at
the end nearest a substituent.
3) Name each substituent (alkyl group) and indicate the number of the carbon to which it is attached.
4) Use di, tri, tetra,… if two or more alkyl groups are identical.
5) List alkyl groups in alphabetical order.
Example: 1. six⇒hexane 2. numberLefttoRight 3. 2-methyl & 4-methyl 4. 2,4-dimethyl

Note:
Naming Alkanes: Putting it all together
1) Name the longest continuous chain. 2) Number the longest chain starting at
the end nearest a substituent.
3) Name each substituent (alkyl group) and indicate the number of the carbon to which it is attached.
4) Use di, tri, tetra,… if two or more alkyl groups are identical.
5) List alkyl groups in alphabetical order.
Use of commas and hyphens

Methane
Molecular formula-CH4
Condensed structural formula-CH4

Ethane
Molecular formula-C2H6
Condensed structural formula-CH3CH3

Propane
C3H8
CH3CH2CH3

Butane
C4H10
CH3CH2CH2CH3

Pentane
C5H12
CH3CH2CH2CH2CH3

Hexane
C6H14
CH3CH2CH2CH2CH2CH3

Heptane
C7H16
CH3CH2CH2CH2CH2CH2CH3

Octane
C8H18
CH3CH2CH2CH2CH2CH2CH2CH3

Nonane
C9H20
CH3CH2CH2CH2CH2CH2CH2CH2CH3

Decane
C10H22
CH3CH2CH2CH2CH2CH2CH2CH2CH2CH3

34
Q

How do alkanes react and which are used as fuels
What are acyclic alkenes
Why is there methane but there is no methene? (Where n=1 on alkanes but In alkenes n=1 is not possible)
Give examples of acyclic alkenes

A
•  Alkanesareratherunreactiveduetothe presence of only C—C and C—H σ-bonds.
•  Greatnonpolarsolvents.
•  Alkanesundergocombustionreactions
  - Example-Combustion of methane
CH4 + 2O2 →CO2 + 2H2O 
∆H = –213 kcal mol-1 
incomplete combustion: CO
 Use as fuels:
methane (natural gas) propane
octanes (gasoline)

Acyclic Alkenes, CnH2n • contain at least one double bond; no rings
• generic molecular formula = CnH2n (one double bond)
• additional double bonds reduces the H number by 2
• Unsaturated hydrocarbons
Have Restricted rotation
,sp2 hybridization,a pi bond,90 degrees rotation around the double bond

Did you notice how there is no methene? Because it is impossible for a carbon to have a double bond with nothing. We all know that for the presence of a double bond a major requirement is that there should be at least 2 carbon atoms. But this compound name consists of ‘meth’ meaning only one carbon atom. Hence, as a conclusion alkene cannot exist with just one carbon atom and thus methene does not exist.

Examples: ethene,propene,

35
Q

What are geometric isomers

Learn naming of alkenes,alkanes and skeleton structure of alkenes

A

Geometric (Cis / Trans) Isomers
Geometric isomers result from restricted rotation around bonds.
Geometric isomers have the same molecular formula and bond connectivity but differ from each other in the spatial arrangement of groups.
• Alkenescannotrotatefreelyaboutthedoublebond.
– The side-to-side overlap in the π-bond makes this impossible without breaking the π-bond.

cis isomer = two substituents on the same side (adjacent C’s) of a double bond (or ring)
trans isomer = two substituents on opposite sides (adjacent C’s) of a double bond (or ring)

Geometric Isomers - Cycloalkanes
Other structural features can restrict rotation, for examples rings. Cyclic alkanes can have cis-, trans- isomers

36
Q

What are cycloalkenes and acyclic alkynes
What are aromatic hydrocarbons
What stabilizes aromatic hydrocarbons

A
Cyclic Alkenes (Cycloalkenes), CnH2n-2
 contain at least one ring with double bond
 generic molecular formula = CnH2n-2
 additional double bonds or rings reduce the H # by 2

Example cyclopropene

Acyclic Alkynes, CnH2n-2
• containaleastonetriplebond;norings;
• generic formula = CnH2n-2 (one triple bond)
• additionaltriplebondsreducetheHnumberby4
• likealkenestheyareunsaturatedhydrocarbons

Q: Do either of the butynes (1 butyne and 2 butyne) exist as cis/trans isomers? Ans: No, the four carbons C–C–C–C are co-linear
• Alkyne (suffix is –yne) names follow rules similar to the alkenes.
• Cyclic alkynes exist, but are not common

Aromatic Hydrocarbons
aromatic hydrocarbon = hydrocarbon consisting of one or more planar rings that exhibit extensive delocalized multiple bonding; 6-membered rings most common (larger and smaller aromatic ring systems exist)
benzene, C6H6 – most common aromatic compound:
• a very stable compound
• C-C bond order about 1.5
• does not react like an alkene

  • Inaromaticcompounds,unlikeinalkenesand alkynes, each pair of π-electrons does not sit between two atoms.
  • Rather,theelectronsaredelocalized;this stabilizes aromatic compounds.
37
Q

What are the derivatives of methyl or toluene benzene
State the functions of these aromatic hydrocarbons
Naphthalene,anthracene,biphenyl,benzo(a)pyrene
State the physical and chemical properties of hydrocarbons

A

methylbenzene -toluene
1,2-dimethylbenzene o-xylene
1,3-dimethylbenzene m-xylene
1,4-dimethylbenzene p-xylene

o = ortho ⇒ 1,2-disubstituted 
m = meta ⇒ 1,3-disubstituted 
p = para ⇒ 1,4-disubstituted

naphthalene pesticides, building materials, dye feedstock
(1 million lbs/yr in US)
anthracene
not widely used, contained in creosote

biphenyl
chemical intermediate, heat transfer fluid (>30 million lbs/yr in U.S.)

benzo[a]pyrene known animal carcinogen, probable human carcinogen
(found in tobacco smoke, gasoline and diesel exhaust, charred food)

Properties of Hydrocarbons

  • Physical properties:
  • generally non-polar
  • soluble in organic solvents - insoluble in water
  • boiling point and melting point increase with chain length
  • Chemical properties:
  • Alkanes relatively unreactive (commonly used as solvents in organic reactions)
  • Alkenes, alkynes, and benzene more reactive. (Reactivity linked to double and triple bonds)
38
Q

What is stereochemistry
What are the two major classes of isomers
What is optical isomerism
What is a plane of symmetry

A

Stereochemistry
• Stereochemistry: the study of spatial arrangements of atoms in molecules and the effects of these arrangements on the chemical and physical properties of substances.
• Minor differences in 3D structure can result in vastly different properties.
• Consider starch and cellulose, which are both composed of the same repeating unit–the connection is just oriented in a different way:
Starch has one axial and one equatorial bond
But cellulose has two equatorial bonds and no axial bond

  • There are two major classes of isomers:
  • Constitutional/structural isomers have different IUPAC names, the same or different functional groups, and different physical and chemical properties.
  • Stereoisomers are compounds with the same molecular and structural formulas, but differ in the spatial arrangements of the atoms. They have identical IUPAC names, except for an extra prefix such as cis vs. trans or R vs. S (naming R and S isomers are not covered this semester)

optical isomers = stereoisomers having non-superimposable mirror images

• Although everything has a mirror image, mirror images may or may not be identical.
• Some molecules are like hands. Left and right hands are mirror images, but they are not identical
(i.e., not superimposable). A molecule (or any object) that is not superimposable on its mirror image is said to be chiral.

Other molecules are like socks. Two socks from a pair are mirror images that are superimposable. A sock and its mirror image are identical.
• A molecule or object that is superimposable on its mirror image is said to be achiral.
Socks are achiral:they are mirror images that are superimposable

Chiral molecules possess no plane of symmetry (asymmetric).
plane of symmetry = a plane that divides an object into two parts, each a mirror image of the

39
Q

Q: Is there an easy way to identify chiral organic molecules?
What are enantiomers

Q: How do we know that optical isomers (enantiomers) exist?

Only C’s With 4 Substituents Can Be Chiral
True or false
Why are carbonyls never chiral

A

Ans: Yes, a chiral organic molecule will contain a carbon atom (termed a stereogenic center, a stereocenter, or a chiral center) that is bonded to four different groups (approximate definition).

Enantiomers are a pair of stereoisomers that are mirror images of each other. Also called optical isomers since they interact with plane polarized light in different (equal and opposite) ways.

Ans: Opticalisomershavethesamebp,mp, density…, but their solutions rotate the plane of polarized light in different directions

carbonyls are never chiral
(only three things are attached to the carbon)

A and B are stereoisomers —more specifically, they are “enantiomers”.

40
Q

What are functional groups
What are haloalkanes
How are they classified
What is the difference between naming alkanes and naming haloalkanes

Halogens have higher priority over alkyl substituents true or false (find out why)

A
A “functional group” is an atom or a group of atoms that imparts characteristic physical and chemical properties to a molecule.
 functional groups (table 24.4) include either
a Carbon-Carbon multiple bond (C=C, C≡C), or one or more heteroatoms (Cl, Br, N, O...)

Haloalkanes (alkyl halides)
generic formula: R–X (X = F, Cl, Br, I)
sp3 carbon
• Alkyl halides are organic molecules containing a halogen atom bonded to an sp3-hybridized carbon of an alkyl group.
• The letter “X” is used as a general symbol for a halogen atom.

Alkyl halides are classified as methyl, primary (1°), secondary (2°), or tertiary (3°), depending on the number of carbons bonded to the C bearing the halogen atom.

• Follows very closely how we name alkanes.
• The main difference is that the parent chain is the longest carbon chain
that contains the halogen as a substituent.

41
Q
What are alcohols 
How are they classified 
How are alcohols named?
What is the alcohol form of 1-propyl,methyl alcohol,2-propyl alcohol or isopropyl alcohol 
What are phenols
A

Alcohols (formula: R–OH)
• Alcohols contain a hydroxy group (OH) bonded to an sp3 hybridized carbon.

One R group alcohols
Two R group alcohols
Three R group alcohols

Naming:
Find the longest carbon chain containing the OH group
Chnage the -e ending of the parent alkane to the suffix -ol
Number the carbon chain to give the OH group the lower number and apply all other rules of nomenclature

1-propyl:
Propanol

Methyl alcohol:
Methanol

2-propyl alcohol:
2-propanol

Add word ‘alcohol’ to the root alkyl group (methyl alcohol)

Phenols: Aromatic Alcohols
Vitamin E is an example of a phenol 
 phenol
Naming:
not benzene alcohol 
not phenyl alcohol

4-chlorophenol
(p-chlorophenol)
Naming:
not chlorophen-1-ol

The alcohols are a class of organic compounds that hold at least one hydroxyl functional group that is attached to a carbon atom. Phenols, on the other hand, are organic compounds consisting of a hydroxyl group which is attached to an aromatic system of hydrocarbons (arene).

Although phenols are often considered simply as aromatic alcohols, they do have somewhat different properties

42
Q

What are ethers
How are ethers named and give examples
What are amines
What are the properties of amines

A

Ethers (formula: R–O–R’)
• IfanalcoholisviewedasH2OwithHreplacedbyR, then an ether is H2O with both H’s replaced by R’s.
• Ethersarerelativelyunreactive.
• Ethersareoftenusedaspolarsolvents.

Simple ethers are usually assigned common names. To do so:
o Name both alkyl groups bonded to the oxygen, arrange these
names alphabetically, and add the word ether.
o For symmetrical ethers, name the alkyl group and add the prefix “di-”.
Examples:
CH3–O–CH2CH3 : ethyl methyl ether

CH3CH2–O–CH2CH3: diethyl ether

Amines
General Formula: RNH2, R2NH, R3N
• Aminesarerelatedtoammonia,NH3,withalkyl groups replacing one or more H.
• Aminesareorganicbases.

Properties of Amines
• Theygenerallyhavestrong,unpleasantodors:
Putrescine (NH2CH2CH2CH2CH2NH2) and cadaverine (NH2CH2CH2CH2CH2CH2NH2) are products of decay with unpleasant odors.
• Trimethylamine[(CH3)3N],formedwhenenzymes break down certain fish proteins, has the characteristic odor of rotting fish.

• Nameendsinwordamine
(Students will not be asked to name amines in this course)

43
Q

G

A
44
Q

What is the general structure of aldehydes and ketones
How are aldehydes and ketones named
Why are formaldehyde and acetone interesting
Name three natural aldehydes with strong odor

A

General Structure:
They have a Carbonyl group
LiketheC=Cbond,theC=Obondis“electronrich.” - UnliketheC=Cbond,theC=Obondisverypolar.

  • For aldehydes, drop the alkane “e” and add “al”.
  • For ketones, drop the alkane “e” and add “one”. Use numbers to indicate location of carbonyl carbon.
    Example 4,5-dimethyl-3-hexanone
  • 37% aqueous solution of formaldehyde (formalin) is used as a disinfectant, antiseptic, and preservative for biological specimens.
  • Diabetics often have unusually high levels of acetone (produced in vivo during breakdown of fatty acids) in their blood streams. Thus, its characteristic odor can be detected on the breath of diabetic patients when the disease is poorly controlled.

Formaldehyde formula and acetone formula

Vanillin (flavoring agent from vanilla beans)
Cinnamaldehyde (odor of cinnamon)
Citronellal (lemon odor,isolated from lemon grass)
Geranial: lemon odor,isolated from lemon grass)
But they have different structures

45
Q

What are carboxylic acids
What are their properties
What are the Derivatives of carboxylic acid and the general formula for esters and amides

A

contain a carboxy group (COOH)
• structure is often abbreviated as RCOOH or RCO2H, but keep in mind that the central carbon atom of the functional group is doubly bonded to one oxygen atom and singly bonded to another.
• IUPAC name: replace alkane “e” with -oic acid

Example methanoic acid

-Theyaretarttasting.: example Ethanoic acid
acetic acid (vinegar),citric acid,lactic acid,aspirin or acetlysalicylic acid
- Carboxylicacidsareweakacids

The functional groups at the heart of this chapter are called carboxylic acid derivatives: they include carboxylic acids themselves, carboxylates (deprotonated carboxylic acids), amides, esters, thioesters, and acyl phosphates. Cyclic esters and amides are referred to as lactones and lactams, respectively.

An amide, also known as an organic amide or a carboxamide in organic chemistry, is a molecule having the generic formula RC(=O)NR′R′′ instead of the usual RCOOH where R, R’, and R′′ are organic groups or hydrogen atoms, respectively. CO-NH is the typical chemical formula for amide groups.

Esters have the general formula R–COO–R′, which is similar to that of the organic acid, but the H of the –COOH has been replaced by a hydrocarbon group. The ending of the name of an ester is ate, such as in ethyl acetate.

46
Q

What are esters

In organic chemistry, the most common functional groups are carbonyls (C=O), alcohols (-OH),carboxylic acids (CO2H), esters ( CO2R), and amines (NH2)

https://uen.pressbooks.pub/introductorychemistry/chapter/functional-groups-names-properties-and-reactions/

Note the condensed structures : RCOOR or RCO2R

A

Estersaretheproductsofthecondensation reaction between carboxylic acids and alcohols.
• IUPACnameendsin–ate.

Acetic acid or methanoic acid plus ethanol gives you ethyl acetate and water

Esters are found in many fruits and perfumes

47
Q

What are amides

A very important amide group is the peptide linkage (or peptide bond) between amino acids in proteins.

Functional Groups and Physical Properties
• Trends in boiling points, melting points and water solubility depend on intermolecular forces.
• Identity of functional group and shape of molecule are important
Increasing strength of intermolecular forces increases w increasing boiling point
What are the major types of organic reactions

A

Amides are formed by the reaction of carboxylic acids with amines
Students will not be asked to name amides.

  1. Additionreactions
  2. Eliminationreactions
  3. Substitutionreactions
  4. Acid-basereactions
48
Q

What are addition reactions

A
  1. Addition Reactions
    A - Hydrohalogenation: addition of HX (X is a halogen) to alkenes and alkynes
    80
    • In an addition reaction, units like X and Y (X and Y could be the same or different identity) are added to pi-bonds in the starting material.
    • Alkenes and alkynes undergo addition reactions.

A - Hydrohalogenation: addition of HX (X is a halogen) to alkenes and alkynes

B - Hydrogenation: addition of H2 to alkenes and alkynes
C - Halogenation: addition of X2 (X is a halogen) to alkenes and alkynesq

49
Q

What are elimination reactions and substitution reactions

What is a condensation reaction

A
  1. Elimination Reactions
    • Elimination - a reaction in which elements of the starting material are “lost” and a new π bond is formed. It is essentially the opposite of addition!
    • Alkyl halides and alcohols undergo elimination reactions.
  2. Substitution Reactions
    • Substitution- a reaction in which an atom or a group of atoms is replaced by another atom or group of atoms.
    • alcohols, benzene, alkyl halides, and carboxylic acid derivatives undergo substitution reactions

• Aromaticcompoundsmainlyundergosubstitution.
• Insubstitutionreactionsofbenzene,hydrogenis replaced by a substituent.
Carboxylic acids undergo substitution reactions to make esters, and amides.

Note: If one or two atoms are replaced by a substantial portion of
an organic molecule, the substitution is referred to as a condensation reaction.

50
Q

What is an acid base reaction
Give an example
What are the major classes of biopolymers and lipids

A
  1. Acid-Base Reactions
    • Alcohols have an acidic hydrogen (RO-H). They are weak acids.
    • Carboxylic acids (RCOO-H) are also weak acids. They are stonger acids than alcohols
    • Carboxylic acids react with bases to form a salt. It is named by replacing alkanoic acid with alkanoate salt.

acetic acid or ethanoic acid plus NaOH will give you sodium ethanoate or sodium acetate plus HOH

Biopolymers
Three major classes
•  Proteins
•  Carbohydrates (Polysaccharides)
•  Nucleic acids
  Lipids
- Fats
- Phospholipids
51
Q

What are amino acids
What are zwitterion
How are amino acids classified

A

Naturally occurring amino acids have an amino group (-NH2) bonded to the α carbon of a carboxy group (-COOH), and so they are called α-amino acids (A).
• At pH ~6 proton transfer in an amino acid forms a salt called a zwitterion (B).
• The 20 amino acids that occur naturally in proteins differ in the identity of the R group (side chain) bonded to the α carbon.
• All amino acids have common names. Names can be represented by either
a one-letter or a three-letter abbreviation (students will not be asked to name the amino acids).

Classification of Amino Acids by Side Chain
• Basic amino acids have an additional basic N atom in the side chain (R group).
• Acidic amino acids have an additional COO- (or COOH) group in the side chain.

  • Polar amino acids have a polar uncharged side chain.examples threonine,cysteine,serine
  • Aromatic amino acids have an aromatic group in the side chain (they are relatively nonpolar). Examples phenylalanine,tyrosine,tryptophan

Nonpolar neutral amino acids: have a nonpolar, non aromatic side chain that is not charged.(examples valine,alanine,glycine,leucine,isoleucine,methionine,proline

The α carbon in common naturally occurring amino acids (except glycine) a is chiral center.
• They have two possible stereoisomers (enantiomers)
• The L-amino acids, are commonly found in nature.
• Their enantiomers, D-amino acids, are rarely found in nature.
Example glycine and alanine are enantiomers

52
Q

What are polypeptides

What are proteins

A

Polypeptides
A condensation reaction between the amine end of
one amino acid and the acid end of another amino acid produces
a peptide bond (special amide group), and the product is a peptide
(di, tri, tetra,…).
Example glycine plus Alanine gives glycylalanine

• Proteins are linear (unbranched) polypeptide molecules.
• They are polymers made of α-amino acids covalently linked to
each other.

The sequence of amino acids is the primary (1o) structure of protein.
Know the amino acid sequence of human insulin

53
Q

What are the characteristics of the secondary structure and tertiary structure of proteins and Quartenary structure
What are the interactions in the tertiary structure
Know the interactions of the secondary structure

A

Proteins - Secondary (2o) structure
• The three-dimensional conformations of localized regions of a protein are called its secondary structure.
• These regions arise due to hydrogen bonding between the N–H proton of one amide and the C=O oxygen of another.
• Two arrangements are particularly stable—the α-helix and the β- pleated sheet.

Proteins - Tertiary (3o) structure
Three-dimensional shape adopted by the entire peptide chain, also referred to as folding of the protein.

Protein - Quaternary (4o) structure
• The shape adopted when two or more folded polypeptide chains (3o structure) aggregate into one functional macromolecule (protein complex)
• Example is hemoglobin covered in case study 9.
• Interactions similar to those in 3o structure.

Interactions in the Tertiary (3o) structure

Proteins generally fold into conformations that maximize stability.
• In aqueous environment, most of the nonpolar side chains are in the interior of the protein, where van der Waals interactions between these hydrophobic groups help stabilize the molecule.
• The greatest number of polar and charged groups remain on the surface to maximize hydrogen bonding interactions with water.
Polar functional groups hydrogen bond with each other (not just water), and amino acids with charged side chains like -COO ̄ and –NH3+ can stabilize tertiary structure by electrostatic interactions.

54
Q

What are monosaccharides and their characteristics
What are disaccharides
What is starch and cellulose

A

Carbohydrates
monosaccharide = simple sugar with 3 to 7 C’s and a formula of the type CnH2nOn
• They are polyhydroxy aldehydes or ketones.
• Ketoses have a ketone (e.g. fructose)
• Aldoses have an aldehyde (e.g. glucose)
• Number of carbons in backbone is indicated using the terms tetroses (4-C), pentoses (5-C), hexoses (6- C)
• Example: glucose is an aldohexose Fructose is a ketohexose

• In solution, monosaccarides form cyclic structures.
• These structures can form chains of sugars
that form structural molecules such as starch and cellulose.
Example: glucose (open-chain and cyclic forms)

Disaccharides
• contain two monosaccharides joined together by a glycosidic linkage.
• react with water (hydrolysis) to give monosaccarides

Starch: polymer of glucose units linked via an α-bond.

Cellulose: polymer of glucose units linked via a β-bond.

55
Q

What are nucleic acids and nucleotide
What’s re the types of nucleic acids
What is base pairing

A

nucleic acid = unbranched polymer of nucleotides

nucleotide = consists of (1) heterocyclic base, (2) a sugar, and (3) one or more phosphates

Two types of nucleic acids:

  • ribonucleic acid (RNA)
  • deoxyribonucleic acid (DNA)

DNA and RNA contain four bases: (students should memorize the names, not formulas)
- DNA – adenine, thymine, guanine, and cytosine - RNA – adenine, uracil, guanine, and cytosine

Base Pairing
- linking of complementary base pairs by means of hydrogen bonds.

In cell nuclei, DNA exists as a double helix held together by hydrogen bonds between base pairs.

56
Q

What are fats,glycerol,fatty acids
State the types of fatty acids
What are phospholipids

Phospholipid:
Lipid Bilayer in Cell Membrane

A

Lipids
Fats - nonpolar biomolecule formed from glycerol and fatty acids used biochemically for long-term energy storage

Glycerol is a triol, an alcohol with three hydroxy groups.
Fatty acid is a carboxylic acid with long carbon-carbon chain.
Classified as:
- Saturated: the carbon-carbon chain contains no double bond (stearic
acid)
- Unsaturated: carbon-carbon chain contains one double bond
(monounsatutated, oleic acid) or more than double bond (polyunsaturated, linoleic acid)

Phospholipids
• are lipids that contain a phosphorus atom
• have only two fatty acid groups
• have a small charged or polar group