CHAPTER 2 - BASIC COMPONENTS OF LIVING SYSTEMS Flashcards
Microscopy, Magnification and Calibration, More microscopy, Eukaryotic cell structure, Ultrastructure of plant cells, Prokaryotic and Eukaryotic Cells
How many types of microscopes are there?
3 - Light, Transmission electron micrscope, Scanning Electron Microscope
What is Cell theory
Both plants and animal tissue is composed of cells
Cells are the basic unit of life
Cells only develop from existing cells
Benefits of Light Microscopy
Easily Available
Cheap
Can be used out in the field
Can observe both dead and prepared specimens
How many lenses does a (compound) light microscope have?
2 - Eyepiece and objective
How many different slides preparation types are there?
4 - Wet mount, Dry Mount, Squash slides, Smear Slides
How are Dry Mounts prepared?
Solid Specimens are viewed whole or cut into very Thin slices with a sharp blade - this is called sectioning.
The specimen is placed on the centre of the slide and a cover slip is placed on top
What would a dry mount be used to view?
eg. Hair, pollen, dust, muscle tissue and plant tissue
How is a wet mount prepared?
Specimens are suspended in a liquid such as water or immersion oil
A cover slip is placed on from an angle
What would a wet mount be used to view?
Aquatic samples and other living organisms
How is a squash slide prepared?
Wet mount is first prepared,
then a lens tissue is used to gently press down on the cover slip
What are squash slides used to view?
Root tip squashes, other soft samples
How are Smear slides prepared?
the edge of a slide is used to smear the sample, creating a thin, even coating on another slide.
A cover slip is then placed over the top of the sample
What are smear slides used to view?
Blood, other thick liquids
Outline the importance of microscopes in the study of living organisms
Microscopes allowed scientists to investigate cell structure, observe the tiniest details of plants, animals, and fungi, and learn about the presence of microbes.
Suggest, with reasons, why cell theory was not fully developed before the mid-19th century
Prior to the mid-19th century microscopes were of too low a magnification to see and identify cells and cell components
suggest reasons why specimens must be thin during microscopy
So light can be seen through
Details can be seen
suggest why when preparing a wet mount the refraction index (ability to bend light) of the medium should be roughly he same as the glass.
reduce / prevent, diffraction between liquid and glass
prevent / reduce distortion of
image
A cover slip must be placed onto the wet mount at an angle suggest why
reduce / prevent air bubbles being trapped
explain why when using basic light microscopy the sample’s image tend to have low contrast
the whole sample is illuminated at once from below
so most cells do not absorb a lot of light
what is resolution in a basic light microscope limited by?
resolution is limited by the wavelength of light
and diffraction of light as it passes through the sample
what is diffraction
diffraction is the bending of light as it passes close to the edge of an object
what parts of cells are often transparent
the cytosol (aqueous interior) and other structures
explain why staining is used in microscopy
Staining provides contrast
Different Organelles absorb stain differently allowing identification
explain how to prepare a sample for staining
Placed on a slide an allowed to air dry
Passed it through a flame
Specimen will then adhere to the microscope side and will take up stain
Explain how crystal violet or methylene blue dyes perform in staining samples
Positively charged dyes
Attracted to negatively charged materials in cytoplasm
Stains of cell components
Explain how the dyes nigrosin or Congo red perform in staining samples
Negatively charged
Repelled by negatively charged materials in cytoplasm
This means that they stay out of cells
Leaves the cells unstained
Which then stand out against the stained background
What are the techniques using the dyes nigrosin or Congo red called?
Negative stain technique
Explain what differential staining is
Differential staining distinguishes between two types of organisms that are hard to identify
Can also distinguish between two different organelles of a single organism within a tissue sample
what is gram stain technique used for?
Gram stained technique is used to separate bacteria into two groups
Gram-positive
Gram Negative
How are Gram Stains prepared?
Crystal violet is applied to bacterial specimen on a slide
Iodine is then applied to fix the dye
The slide is then washed with alcohol
explain how gram positive bacteria are identified using the gram stain technique
Gram positive bacteria retain crystal violet stain and will appear blue/purple
How is gram negative bacteria identified
Gram negative bacteria have thinner walls and therefore lose the crystal violet stain
Then stained with safranin dye - called a COUNTERSTAIN
Bacteria will then appear red
Describe the effect of the antibiotic penicillin on gram positive and negative bacteria
Gram positive are susceptible to the antibiotic penicillin, which inhibits the formation of cell walls
gram-negative have much thinner cell walls and are not susceptible to penicillium
What is acid-fast technique used for
Differentiate species of Mycobacterium from other bacteria
explain how acid-fast technique is carried out
Lipid solvent is used to carry carbolfuchsin dye into the cells being studied
Cells are then washed with a dilute acid-alcohol solution
Mycobacterium are not affected by the acid-alcohol and retain the carbolfuchsin stain, which is bright red.
Other bacteria lose the stain and are exposed to a methylene blue stain - which is blue
explain the process of ‘fixing’ on slides that have been pre-prepared
chemicals like formaldehyde are used to preserve specimens in as near natural state as possible
explain the process of ‘sectioning’ on slides that have been pre-prepared
Specimens are dehydrated with alcohols
Then placed in a mould with wax or resin to form a hard block.
this can be then thinly sliced with a knife called a microtome
explain the process of ‘staining’ on slides that have been pre-prepared
specimens are often treated with multiple stains to show different structures
explain the process of ‘mounting’ on slides that have been pre-prepared
the specimens are then secured to a microscope slide and a coverslip is placed on top
Why must a risk assessment be carried out?
many of the stains used in preparations of slides are toxic,
risk assessment is used to identify any procedures involved that may result in harm.
Use your knowledge of gram positive and gram negative bacteria:
Suggest why gram -negative infections are more difficult to treat than gram positive
Gram negative have thinner cell wall
Penicillin disrupts cell wall formation
Less cell wall formation (in gram negative)
Prevents entry of penicillin (1)
Rules for the production good scientific drawings
- include title
- magnification
- sharp pencil for drawing and labels
- while unlined paper
- as much proportion of paper as possible
- smooth continuous lines
- no shade
- clear defined structures
- ensure proportions are correct
- no crossing of label lines and no arrow heads
- labels barrel and drawn with ruler
Magnification formula
Magnification = Image size/actual size
What is the difference between magnification and resolution
Magnification is the ratio of the image size to the object size
Resolution is the ability to distinguish two separate points
Explain why a light microscope will not usually magnify images to greater than 1500x
The resolution of a light microscope is not sufficent
What are the disadvantages of light microscopes
Resolution is limited
How can you tell the difference between images created by an electron microscope and one created by a transmission electron microscope
A SEM Image is in 3D and has surface view
A TEM image allows you to see
inside the organelles
Unit conversions for microscopy
1000 nanometres = 1 micrometre
1000 micrometres = 1 millimetre
1000 millimetres = 1 metre
What are the advantages of scanning electron microscope and transmission electron microscope
+ high resolution, so image can be magnified more and will still show more detail
+ SEM also give 3D images with depth of field and are good for viewing surfaces
What are the disadvantages of scanning electron microscope and transmission electron microscope
- Large and very expensive
- Require trained operatives
- the sample must be dried out and therefore is dead, so they cannot be seen in real time and it may also affect the shape of the features seen
- need false colour for micrographs
How do you use an eyepiece graticule?
Use a x4 objective lens first
Bring both the eye piece graticule and stage micrometer divisions into focus using the course adjustment and fine focusing knobs
Line up the eyepiece graticule and stage micrometer divisions.
Take a reading of how many eyepiece graticule divisions corrospond to the stage micrometer divisions
As every stage micrometer division equates to 0.1 mm you can calculate the equal Lange length of the eyepiece graticule divisions
From there calculate one eye piece graticule division
In both mm and micrometers
State the correct names of the scale used on the stage of the microscope and the scale of the eyepiece
Stage Micrometer
Eye Piece Graticule
A blood smear is stained with raisin and harmatoxylin, explain what the observer should expect to see using the light microscope
Red blood cells and white blood cells
The nucleus of the white blood cell
State the differing magnification of a light, scanning electron and transmission electron microscope
- Light - 1000- 2000x
- SEM - 50,000- 500,000x
- TEM - 300,000 - 1,000,000
State the differing resolution of a light, scanning electron and transmission electron microscope
Light - 50- 200 nm
SEM - 0.4-20nm
TEM - 0.05 - 1nm
Uses of light, scanning electron, transmission electron microscopes
Light: viewing cells and tissues
Scanning : viewing surface of cells and organelles
Transmission: detailing organelles (ultra structure)
Explain why the resolution of an image can be increased by using beams of electrons
Beams of electrons have shorter wave length than light
Electron beams are still diffracted
But the shorter wavelength means the individuals be as can be much more closer together before they overlap
This means objects that are much smaller and closer together can be seen with more detail without diffraction blurring the image
What is an eyepiece graticule
used to find out size of specimen
Fit into eyepiece
transparent ruler with numbers
no units
What is a stage micrometer
used to work out size of specimen
placed on a stage
microscope slide with accurate scale
it has units
used to work out value of divisions in eyepiece graticule
at a particular magnification
Suggest why it is important to calibrate the lens going to be used to view the specimen
Scale on eyepiece graticule is always the same
Magnification of other lenses changes
Need to calibrate eyepiece graticule for each lens to know actual measurements represented by eyepiece graticule at different magnifications
necessary to calculate real size of objects seen.
Suggest why you should put all measurements into the same units before carrying out nay calculations
Simplifies calculations
Reduces room for errors
What is contrast?
Difference in shade or colour between two objects