Chapter 18: Methods in Microbial Ecology Flashcards
Roles of microbes in ecosystems
Production of particulate carbon
Decomposition
Nutrient cycling
Interactions with other organisms
Reason for difficulty culturing all microbes
Competition from faster growing microbes
Not used to working with scale
Culture-dependent methods of analysis
Growth on media
Winogradsky column
Spectrophotometry
Winogradsky column
Artificial ecosystem
sulfur rich soil in tube with foil cap at top
High O2 concentration at top, high H2s concentration at bottom
Drawback of culture-dependent analyses
Not true measures of abundance, only isolation of certain metabolic types
Culture-independent methods of analysis
Microscopy
Flow cytometry
Genetic analysis
“semi-dependent” measures of microbe activity
chemical measures
isotopic tracers