Chapter 1: Introduction Flashcards
microorganism
an organism too small to be seen with the unaided eye
types of microorganisms
bacteria, archae, fungi, protozoa, microscopic algae, viruses, multicellular animal parasites
why are viruses considered to be microorganisms?
they are not alive (they do not carry out respiration) but they do impact living things
pathogenic
disease-causing
six things that microorganisms do for us
decompose organic waster generate oxygen treat diseases produce chemical products produce fermented foods produce manufactured products
TEM
transmission electron microscope: views inside a dead specimen
SEM
scanning electron microscope: view surface of specimen
epidemic
widespread outbreak of infectious disease
endemic
localized outbreak of infectious disease
Carolus Linneaus established
system of scientific binomial nomenclature
scientific name consists of
genus and specific epithet
species
two organisms that can mate and reproduce a viable offspring
why is it difficult to classify bacteria?
horizontal gene transfer allows the sharing of genetic material without being related
why was Escherichia coli given its name?
discovered by Theodor Escherich
lives in the colon
three domains of life in order of appearance
archae bacteria - no nucleua
(eu)bacteria - no nucleus
eukaryo - nucleus
prokaryotes
unorganized nucleus
consists of bacteria and archae
bacteria have cell walls made of
peptidoglycan (carbohydrate, peptide protein)
bacteria divide by means of
binary fission
bacteria get energy from
organic or inorganic chemicals
photosynthesis
archae have cell walls made of
they do not have cell walls
archae live in
extreme environments
three examples of archae
methanogens
halophiles
thermophiles
methanogens
produce methane in anaerobic conditions
halophiles
live in environments with high salt concentrations
thermophiles
live in environments with extremely high temperatures or low (acidic) pHs
eukaryotes
have defined nucleus
eukaryotic microorganisms
fungi
protozoa
algae
multicellular animal parasites
fungi cell wall is made up of
chitin
fungi gets nutrients by
absorbing organic chemicals
unicellular fungi
yeasts
multicellular fungi
molds and mushrooms
mold
masses of mycelia, composed of hyphae (filaments)
protozoa get nutrients by
absorbing or ingesting organic chemicals
how can protozoa be motile?
pseudopod
cilia
flagella
where can protozoa live?
free living or parasitic
algae cell wall is made up of
cellulose
algae live in
freshwater, salt water, or soil
algae get energy
photosynthesis
algae produce
carbohydrates and oxygen
multicellular animal parasites are considered microorganisms because
they have microscopic stage in life cycle
helminths
parasitic flat and round worms that have microscopic early life stage
viruses are considered to be
acellular (not living)
viruses genetic material
DNA OR RNA core
virus core may be surrounded by
protein coat
lipid envelope
viruses can replicate when
living in an active host cell
what if a virus is not inside of an active host cell?
it may remain inert for minutes to years depending on the virus
Carl Woese
classified Archae
Hooke
reported living things are composed of little boxes (cells)
marks beginning of cell theory
van Leeuwenhoek
observed first microbes (animalcules) through magnifying glass
spontaneous generation
hypothesis that life arises from nonliving matter
biogenesis
hypothesis that living cells only arise from preexisting living cells
Redi
decaying meat experiment
showed that maggots come from fly eggs, not the meat
supported biogenesis
Needham
boiled broth in covered flask experiment
microbial growth because he did not heat the broth enough
supported spontaneous generation
Spallanzani
boiled nutrient solution in sealed flask
no microbial growth because he heated the broth enough to kill the microbes
supported biogenesis
Pasteur
boiled nutrient broth in flask, one sealed, one open
microbial growth in open flask
demonstrated microbes are present in air - biogenesis
Golden Age of Microbiology
1857-1914, began with Pasteur’s work
discoveries during the Golden Age
biogenesis
relationship between microbes and disease
immunity
antimicrobial drugs
discoveries during the Golden Age: fermentation
microbial conversion of sugar to alcohol in absence of air
Pasteur
discoveries during the Golden Age: microbial growth responsible for
spoilage of food and beverages
bacteria spoils wine by converting it to acetic acid
discoveries during the Golden Age: pasteurization
application of a high heat for a short time to kill harmful bacteria in beverages
Germ Theory of Disease
some diseases are cause by microorganisms
Bassi
showed a silkworm disease was caused by fungus
Pasteur’s contribution to Germ Theory
showed another silkworm disease was caused by protozoan
Semmelweis
advocated handwashing to prevent transmission of puerperal fever
Lister
used chemical antiseptic (phenol) to prevent surgical wound infection
proved microbes cause surgical wound infections
Lister applied whose work for his discovery
Pasteur
Lister’s discovery caused surgical complications to drop
95%
Koch
discovered bacterium causes anthrax
what is Koch’s Postulates?
experimental steps to demonstrate that specific microbe causes a specific disease
what are Koch’s Postulates?
- observe ill person and extract infected tissue
- grow cultures in lab
- inoculate a healthy person
- if previously healthy person shows same symptoms, proves that illness is contagious
Jenner
inoculated healthy person with cowpox virus - subject became immune to smallpox
vaccination is derived from the Latin word
vacca - cow
immunity
protection
can be passive or active
attenuated
weakened virus in vaccines to allow body to form antibodies (passive immunity)
chemotherapy
treatment of disease with chemicals
agents for treatment can either be
synthetic drugs or antibiotics
antibiotics
chemicals produced by bacteria and fungi that inhibit or kill other microbes
why have some strains of bacteria become resistant to drugs?
overuse
not finishing prescription
sharing prescriptions
first synthetic drug
quinine tree bark used to treat malaria
Ehrlich
speculated about “magic bullet” that could destroy pathogen without harming host
what drug did Ehrlich develop and what did it treat?
salvarsan
syphilis
what was synthesized in the 1930s
sulfonamides - synthetic antimicrobial agents that serve as basis for many drugs
Fleming
discovered first antibiotic by accident
noticed bacteria free are around fungul growth in a petri dish
first antibiotic discovered
Penicillin, secreted by Penicillium notatum (fungus)
study of bacteria
bacteriology
study of fungus
mycology
study of protozoa and parasitic worms
parisitology
study of viruses
virology
Iwanowski and Stanley
discovered virus causes of mosaic disease of tobacco
study of immunity
immunology
how are viruses prevented
use of vaccines and interferons
Lancefield
classified streptococci based on cell wall components
gram positive
shows purple stain
peptidoglycan wall retains dye
gram negative
shows red or pink stain
peptidoglycan wall is not outermost layer so dye is washed away
microbial genetics
study of how microbes inherit traits
molecular biology
study of how DNA directs protein synthesis
genomics
study of organism’s genes
provides new tools for classifying microorganisms
recombinant DNA
DNA made from two different sources
Berg
inserted animal DNA into bacterial DNA
bacteria produced animal protein
Beadle and Tatum
showed genes encode a cell’s enzymes
Avery, MacLeod, McCarty
showed DNA is hereditary material
Watson, Crick
proposed model of DNA structure
Jacob and Monod
discovered role of mRNA in protein synthesis
Microbial Ecology
study of relationship between microorganisms and envrionment
bacteria convert C, O, N, S, P into usable forms
bioremediation
using microbes to clean up pollutants (degrade organic material in sewage, oil, mercury, etc.)
microbes that are pathogenic to insects are
alternatives to pesticides
Bacillus thuringiensis
infections from Bt are fatal in insects but harmless to plants and animals
decreases usage of chemical pesticides
biotechnology
use of microbes for practical applications (food, chemical, pharmacology industries)
recombinant DNA technology
enables bacteria and fungi to produce variety of proteins, vaccines, enzymes
gene therapy
can replace missing or defective genes in humans
GMO
genetically modified organisms used to prevent crops from insects, freezing
normal microbiota
microbes normally presented in/on human body
what does normal microbiota do?
prevent growth of pathogens
produce growth factors (vitamins B, K)
create resistance
resistance
ability of body to ward off disease
resistance factors
skin, stomach acid, antimicrobial chemicals (sebum, tears, etc.)
biofilms
microbes attach to sold surface and grow into masses
biofilms can grow on
rocks, pipe, teeth, medical implants, etc.
how are biofilms harmful?
can cause infection, often resistant to antibiotics
emerging infectious diseases (EIDs)
new disease and disease increasing incidence
EIDs occur when
pathogen invades host and overcomes host’s resistance
EIDs are caused by
water, air, or food borne viruses, bacteria, or protozoans
Middle East Respiratory System (MERS) caused by
MERS-CoV (coronavirus)
MERS is common to
SARS - Severe Acute Respiratory Syndrome
MERS caused
100 deaths in Middle East from 2012-2014
Avian Influenza A (H5N1)
influenza A virus primarily in waterfowl and poultry
sustained human-human transmission not yet occured
Methicillin-resistant Staphylococcus Aureus (MRSA)
became resistant to penicillin, them methicillin, than vancomycin
VISA
vancomycin-intermediate S. aureus
VRSA
vancomycin-resistant S. aureus
West Nile Encephalitis (WNE) caused by
West Nile virus
WNE first diagnosed in
Uganda, 1937
WNE first appeared in United States in
New York City, 1999
WNE transmitted from
birds to horses to humans by mosquitoes
E. Coli 0157 H7
toxin-producing strain of E. Coli that causes bloody diarrhea
Ebola hemorrhagic fever (EHF)
Ebola virus that causes fever, hemorrhaging, clotting
Transmitted via contact with infected blood/body fluids
Cryptosporidiosis
Caused by cryptosporidium protozoa
Causes 30% of diarrheal illness in developing countries
Transmitted by water
Acquired Immunodeficiency Syndrome (AIDS)
Sexually transmitted disease caused by human immunodeficiency virus (HIV)
How many people are affected by AIDS?
35 million worldwide, 6000 new infections each day
Demographics of AIDS patients
26% are female, 49% are African-American
Bovine spongiform encephalopathy
Caused by prion that also causes Creutzfeldt-Jakob Disease (CJD)
New variant of CJD in humans related to
Cattle that were fed with prion-infected sheep meat
Bovine
Sponge
Enceph
Cattle
Makes tissue spongy
Brain