Cell Physiology - Theoretical Questions Flashcards
1,1) What are the two factors determining the net movement of water across the body compartments?
Hydrostatic Pressure - from Heart pump force + gravity
Osmotic Pressure - from solute but mostly plasma proteins (Oncotic)
1,1) Ion concentration difference is kept by?
What kind of transport?
Na+/K+ ATPase (3 Na out and 2 K In)
Primary Active Transport
1,1) What is the name of the process which uses the Sodium concentration gradient to increase the cells amount of other nutrients?
Secondary active transport
With Co-transports like SGLT for Na+Glucose (or Amino Acids Co-transporters)
1,1) How is plasma concentration of ions different from general ECF ion concentration?
Why?
Plasma is slightly more positive, containing more - Cations.
Due to higher Protein content(-) attracts more positive ions, Gibs Donham Equilibrium
1,1) What are the examples of transcellular fluids?
Ocular, Synovial, CSF, Pleural, Peritoneal Fluids
1,1)Effect of Liver disease on body fluid distribution? (Among many others.. from Oral exam)
No Production of Albumin, Oncotic Pressure decreases, Less fluid gets reabsorbed back to capillaries, Edema in the Limbs.
1,1) What is the Reflection coefficient?
Possible values and their meaning?
Reflection Coefficient (Sigma) - describes how easily the ion can pass through the membrane (Ranges from 0 to 1)
1 - Impermeable (Albumin) = Not Diffusible.
0 - Permeable (Urea) = Diffusible
1,1) would we calculate the amount volume of a body compartment using a solute? The general formula and application. (from oral exam)
CV=CV (=Moles)
After the fluid was obtained (blood/urine/csf..) using lab specific technics concentration and volume measurements - indirect indication of body compartment volume.
1,1) What solute do we use to measure Blood plasma volume? Why?
Evans blue
It is bound to Plasma proteins therefore it will not penetrate the endothelial layer and go to the Interstitial fluid compartment or ICF.
1,1) What solute do we use to measure ECF volume? Why?
Inulin. It is a small carbohydrate molecule that can travel to Interstitial fluid and back (from plasma), Secreted in urine. No transporter to get to ICF.
1,1) How should we measure Interstitial fluid volume?
ECF - Blood plasma = Interstitial Fluid.
1,1) How should we measure ICF volume?
Total Body water - ECF = ICF.
1,1) What solute do we use to measure TBW volume? Why?
TBW - Total body water is measured by Deuterium, an Isotope of Hydrogen - “Heavy water” formes.
This is a substance that goes through all the body compartments.
1,2) Membrane Structure - General Features:
According to Fluid Mosaic Model : Primarily phospholipid Bilayer, also cholesterol, proteins and Glycoproteins.
1,2) Give examples for substances that the phospholipid membrane is permeable to:
Non-Polar/Hydrophobic Substances:
Oxygen, Carbon Dioxide, Fatty Acids, Steroids
1,2) Give examples for substances that the phospholipid membrane is Impermeable to:
Polar/Hydrophilic Substances:
Ions, Glucose, Amino Acids
1,2) Give examples for Amphipathic phospholipids:
Most abundant are Lecithin and Sphingomyelin
1,2) Give an example for membrane lipid that participates in signaling process ? what is the mechanism? What is the result?
Gq activated PLC cleaves Phosphatidylinositol Bisphosphate to form the Signaling molecule IP3.
DAG is also released. General Ca+ and PKC activation.
1,2) What is the job of cholesterol in the phospholipid membrane?
Responsible for Membrane fluidity and Adaptations to different temperatures.
Creates lipid rafts, Separates the phospholipids from one another in specific areas.
1,1) Gibbs-Donnan Ratio:
Plasma concentration relative to Interstitial fluid concentration.
Expressed for specific Ions
1,2) What are the Integral Proteins?
What are their jobs?
Integral Protein - Embedded into the Membrane.
Some are Transmembrane -Connecting ICM to ECM, Cross it several times,
1,2) What are the Integral Proteins?
What are their jobs?
Integral Protein - Embedded into the Membrane by Hydrophobic Interactions.
Some are Transmembrane -Connecting ICM to ECM, Cross it several times, Examples are Ion channels, Na/K ATPase, GPCRS.
1,2) What are the Peripheral Membrane Proteins?
What are their jobs?
Peripheral Membrane Proteins - Attached to ECM or ICM side by Electrostatic interactions with Integral Proteins. Ankyrin is an Example.
1,2) What are the Glycoproteins?
What are their jobs?
Glycoproteins - Carbohydrates chains attached to the surface and continuous with Integral membrane proteins. Examples are MHC units that function in Immunity and cell cell interactions.
1,2) Simple diffusion:
Passive; Concentration gradient dependent solute movement. Not mediated by a carrier. Doesn’t require any metabolic energy.
According to Fick’s 1st law: J=-DxAx C/X.
1,2) Facilitated Diffusion :
Passive; Concentration gradient dependent solute movement. Mediated by a carrier. Doesn’t require any metabolic energy. Like GLUT4 or Aquaporins.
1,2) Primary Active Transport :
Active; Movement of solute against the Concentration gradient. Mediated by a carrier. Uses Direct metabolic energy in the form of ATP.Like ATPases - Na/K, H/K…
1,2) Cotransport:
Cotransport - Secondary Active transport; Uses the Na+ Concentration gradient as a indirect source of energy to move the solute INSIDE the cell. Like SGLT.
1,2) Countertransport:
Countertransport - Secondary Active transport; Uses the Na+ Concentration gradient as an indirect source of energy to move the solute OUTSIDE the cell. Like Na+/H+ exchanger.
1,2) Vesicular Transport: Give examples.
Endocytosis example - Clathrin coated Cholesterol uptake or Phagocytosis in Macrophages.
Exocytosis - Could be Constitutive or Regulated: For example Insulin secretion in beta cells is regulated by calcium signal.
1,2) Paracellular: Give examples.
Across tight junctions:
In small intestines - Leaky, water movement.
In Kidney collecting Ducts - Regulated by Aldosterone
1,3) What is Saturation in regard to Transport processes?
When all of the solute binding sites on the transport proteins are occupied. Can be calculated by Michaelis Menten equations. Tm is the Abbreviation (Like Vmax).
1,3) What is is the difference between the Saturation of Ion channels and Carrier proteins?
Ion channels do not bind the solute but simply make it energetically favorable for it to move across them - therefore their Saturation is diffusion limited while Carrier proteins are saturated faster.
1,3) What are the 6 Ion channel basic characteristics?
1)Passive transport 2)Charge and Size Selectivity 3)Transmembrane Proteins 4)Gated - Conformation change by Ligand or Voltage 5)Diffusion Limited - No saturation in physio conditions. 6) 10^8 Ions/Sec - FAST
1,3) What are the 4 Ion channel basic roles?
1)Development of Resting Em (K channels) 2)AP Formation 3)Secretion 4)Cell Volume - Osmosis
1,3) Na+ Voltage gated channels:
Na VGC: Activated by Depolarization. Cyclic Action Modes: Closed-Inactivable, Closed-Activable, Open. Fact activation, Slow inactivation. Acts in AP formation.
1,3) K+ Voltage gated channels:
K-VGC: Responsible for Repolarization stage of AP.
Movement of K outside.
1,3) Inwardly rectifying K channels:
IRK: Active when Membrane is Hyperpolarized letting Potassium into the cell, Closes when Membrane is Depolarized not letting K out.
1,3) Classification of Ion channels:
By Ion Charge/By Solute selectivity/ By Gating Mechanism
1,3) Examples for Second Messenger activated Ion channels:
IP3R - ER membrane Calcium channel.
RYR- Calcium induced Calcium Release from ER.
ATP Sensitive K channel - CLOSES when ATP attaches OPENS when ADP attaches.
1,3) Examples Ligand gated Ion channels:
Ligand Gated Na+ : AMPA Glutamate receptor.
Ligand Gated Cl- : GABA A receptor
1,3) Mechanosensitive Channels Examples:
Muscle spindles have Mechanosensitive
channels that respond in unitary manner, where stretch directly correlates to amplitude.
1,3) Heat sensitive Channels Examples:
TRPV family - Capsaicin from Chilli peppers is an Agonist but this is mainly a Heat sensitive channel.
1,3) Heat sensitive Channels an Example:
TRPV family - Capsaicin from Chilli peppers is an Agonist but this is mainly a Heat sensitive channel. These are Non selective channels.
1,3) General Roles of Voltage Gated Calcium Channels:
- Ca+ Sensitive K Channel
- Muscle Contraction
- Hormone and Neurotransmitter release from Synaptic Terminal.
- Gene Expression Regulation
1,3) Why is Calcium such an Efficient intracellular Signal?
Its Intracellular Concentration is 100nM which is very low in comparison to the mM range in EC or ER - Peaks FAST. PMCA and SERCA are able to restore normal concentrations quickly as well. Many proteins are activated by calcium.
1,3) L-Type Voltage Gated Calcium Channels:
“Long lasting” - Aids in Muscle contraction (NMJ), Cardiac AP Plateau, High activation range - (-25mV)
1,3) T-Type Voltage Gated Calcium Channels:
“Transient” - SA Node, Pacemaker activity, Low activation range - (-40mV)
1,3) N-Type, P-Type, R-type Voltage Gated Calcium Channels:
N - CNS and PNS, Release of Synaptic Vesicles
P - Purkinje Cells
R- Neuronal
1,4) Defenition of Resting Membrane Potential: What is it dependent on?
Relatively static Potential, for the Membrane of cell which is not active. It is the Potential Difference between EC and IC. Dependent on the large Potassium permeability and the Action of Na/K ATPases.
1,4) Defenition of Diffusion Potential:
Caused by Transmembrane movement of a Ion.
Could occur only if the Membrane is permeable to this Ion (Via Channels) . Measured in mV, It’s sign depends on the charge of the Ion.
1,4) Defenition of Equilibrium Potential:
This is an extension of the concept of Diffusion potential. It is the Potential where no net movement of the Ion of interest. It is an Electrochemical Equilibrium.
1,4) What is the Nernst Equation:
E= (-2.3RT/zF)xLog(Ci/Ce) (-2.3RT/F is -60 at STP)
Converts the concentration difference of an Ion into voltage. z is the Ion charge.
1,4) What is a Driving Force (In relevance to Em and Eq):
A Driving force is the difference between the actual Membrane Resting Potential and the Equilibrium potential for an Ion of Interest. This will determine the Ion Current Direction and Magnitude.
1,4) What are the values that the resting membrane potential is close to? why?
Em is close to the equilibrium potentials of Cl- and K+.
Because the permeability to these Ions is the Highest.
1,4) What are the values that the resting membrane potential is far from ? why?
Em is far from the equilibrium potentials of Na+ and Ca+.
Because the permeability to these Ions is the lowest.
1,4) How can we calculate the Resting Membrane Potential of the Cell?
Goldman-Hodgkins-Katz Equation- “Extended Nernst”:
-60 times Log of Summing all the Ions EC and IC concentrations while multiplied by their specific permeability values.
1,4) How Does Na/K Atpases contribute to the Membrane potential value?
1) Electrogenic - 3Na out and 2K in. (Minor effect ~5mV)
2) Indirect - Establishing the K gradient (Greater effect)
1,4) What is the Physical cause of Permeability for an Ion?
Amount of “Leaky” channels for the specific Ion will determine its Permeability.
For example Inwardly rectifying K channels in ventricular Myocytes increase its K permeability.
1,4) What is Different for the equilibrium potential of Chloride?
It is Inverted- negative because of the Negative charge of the Chloride Ion. Meaning that in HGK Equation it will be noted as Ce/Ci .
1,5)Depolarization:
Depolarization: the process of making the membrane potential less negative. Meaning more positive Ions travel into the cell.
1,5)Hyperpolarization:
Hyperpolarization: the process of making the membrane potential more negative.
1,5)Threshold Potential:
Threshold Potential: The potential value from which the occurrence of an Action potential is Inevitable. The beginning of the AP Upstroke.
1,5)Refractory Period:
Refractory Period: a period during which another normal action potential cannot be elicited in an excitable cell. Refractory periods can be absolute or relative. Relative = Hard to form another AP, Absolute = Impossible.
1,5)Properties of Action Potentials:
1) Stereotypical size and shape - Identical Normally.
2) Propagation - Nondecremental.
3) All-or-None Response - Threshold Dependent, Enough graded potential will cause an AP formation (Temporal and Spatial Summation).