Catabolism Flashcards

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1
Q

What is catabolism

A

The breakdown of complex materials within the organism

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2
Q

What is anabolism?

A

The constructive part of metabolism concerned with macromolecular synthesis.

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3
Q

What is the importance of catabolic reactions ?

A

Serve to capture chemical energy (in the form of ATP) from the degeneration of energy rich fuels molecules.
Provide the precursors needed for the synthesis of complex molecules.

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4
Q

Degeneration of complex molecules occur in three stages.

A
  1. Hydrolysis of complex molecules into component building blocks
  2. Conversion of building block to simple intermediates.
  3. oxidation of acetyl CoA
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5
Q

Describe stage 1 of Hydrolysis of complex molecules into component building blocks in the catabolism

A

The complex molecules are broken down into their simple building blocks. For e.g. Proteins into amino acids, polysaccharides into monosaccharides, triacylglyecerols to free fatty acids and glycerol

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6
Q

Stage two of catabolism: conversion of building blocks to simple intermediates

A

The diverse building blocks are further degraded to acetyl CoA and a few other simple molecules. Some energy is captured as ATP.

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7
Q

3rd stage of catabolism: oxidation of acetyl CoA

A

The citric acid cycle is the. Common pathway in the oxidation of fuel molecules. Acetyl Co A is oxidized to two CO2 and four pairs of electrons are transferred to the co enzyme NAD+ and Fad+ to produce NADH and FADH2. Large amounts of ATP are generated as electrons are from NADH and FADH2 flow to oxygen in oxidative phosphorylation .

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8
Q

What does anabolism entail?

A

Combine molecules such as amino acids to form complex molecules such as proteins. They need energy from break down of ATP to ADP and Pi. Anabolic reactions often involve chemical reductions in which the reducing power is provided by the electron donor.

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9
Q

Is catabolism a convergent process?

A

Yes! Convergent means a wide variety of molecules are transformed into a few common end products.
Divergent process in which a few biosynthesis precursor form a wide variety of polymeric or complex products.

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10
Q

list facts about intracellular receptors.

A

The receptors are located within the cytosol or nucleus.
The receptor agonist complex binds to specific regions of DNA such as enhancers regions thus increasing expression of specific genes. The agonist is high lipid based in order to gain access into to cytoplasm or nucleous through the membrane .
The effects of the agonist is not immediate because time is required for gene transcription and for subsequent translation of mRNA.

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11
Q

Describe the mechanism of intracellular receptors

A

Steroid for example have a high lipid affinity and can enter in to the membrane easily. The inactive receptor in located in the cytoplasm and the steroid binds to the intracellular receptor and become an activate receptor complex. The complex then enter the nucleus from the cytoplasm and binds to chromatin activation the transcription of specific genes. mRNA is then translated before a change in brought about.

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12
Q

Does cell surface receptors regulate gene expressions directly?

A

No

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13
Q

Four examples of intracellular receptors

A

Steroid receptors
Vitamin D and retinoic acid receptor
Thyroxine receptors

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14
Q

Fact about Neurotransmitter receptors linked to ion channels.

A

E.g. Ligand gate ion channels.
Composed of one complex called a single multiplex ulnar complex. For example the binding of a neurotransmitter causes a rapid opening of ion channels that are selectively permeable to either cation or anions.

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15
Q

What are the products of catabolism reactions ?

A

ATP
FADH2
NADH
NADPH

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16
Q

What does ATP mean?

A

Adenosine triphosphate

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17
Q

What does FADH2 mean?

A

Flavin adenine dinucleotide

18
Q

What does NADH stands for?

A

Nicotinamide adenine dinucleotide

19
Q

NADPH stand for?

A

Nicotinamide adenine dinucleotide phosphate

20
Q

Why must pathways of metabolism must be coordinated

A

So that the production of energy or the synthesis of end products meet the needs of the cell.

21
Q

What two factors depend on regulation of metabolism?

A

Intracellular signals and intercellular is signals.

22
Q

What are the types of intercellular signals?

A

Synaptic signaling
Endocrine signaling
Direct contact e.g cell junction

23
Q

What is the purpose of chemical messengers?

A

Chemical messengers are secreted by cells in response to a specific stimulus and travel to a target cell where they bind to a specific receptor and elicit a response.

24
Q

Chemical receptors can be classified as ?

A

Autocrine acting on the same cell or nearby cells of the same type.
Paracrine travel between nearby cells
Endocrine travel in the blood

25
Q

What can be the response of chemical messenger systems?

A

Affect cellular ion levels,
Activation/ inhibition of enzymes
Change in gene expression.

26
Q

What are the four basic types of signal transduction ?

A

Steroid receptor
Gated ion channel
Receptor enzyme
G protein coupled receptor

27
Q

Explain gated ion channels

A

Opens or closes in response to concentration of signal ligand or membrane potential.

28
Q

Explain receptor enzyme

A

Ligand binding to extracellular domain stimulates enzyme activity in intracellular domain.

29
Q

Explain GPCR

A

External ligand binding to receptor activates an intracellular GTP- binding which regulates an enzyme that generates an intercellular second messenger.

30
Q

Steroid receptor

A

Steroid binding to a nuclear receptor protein allows the receptor to regulate the expression of specific genes.

31
Q

G protein coupled receptors have how many membrane helices that span the membrane ? B. which part of the domain interacts with the G protein?

A

7 transmembrane helices and the intracellular domain interacts with G proteins.

32
Q

Mechanism of the GPCR

A

Unoccupied receptor does not interact with the Gs protein. When the agonist bindings to the receptor there is a change in shape and interacts with Gs proteins. Gs proteins releases GDP and binds to GTP on the alpha subunit. The alpha subunit of Gs dissociates and activates adenylyl Cyclase. When no more hormone is no longer present, the receptor reverts to resting state.

33
Q

What happens if the hormone receptor does return to it resting state?

A

Thereis a chance of cancer.

34
Q

What is the importance of adenylate Cyclase system?

A

It a membrane bound enzyme that converts ATP to 3,5- adenosine monophosphate ( cAMO) which is the second messenger .

35
Q

What is the role of phosphodiesterase?

A

Hydrolyses cAMP to 5’ AMP.

36
Q

Phosphodiesterase is inhibited by?

A

Methylxanthine derivative such as theophylline and caffeine.

37
Q

Explain the mechanism when epinephrine bind to a G protein

A

Epinephrine binds its specific receptor the occupied receptor causes a replacement of the GDP to GTP activating Gs.
Gs moves to adenylyl Cyclase and activates it.
Adenylyl Cyclase catalyses the formation of cAMP.
cAMP is activates Protein kinase A.
PKA causes the phosphorylation of cellular proteins in response to epinephrine .
cAMP is degenerated reversing the activation of PKA.

38
Q

What is the role of phospholipase C?

A

Activated phospholipase C cleaves membrane bound phosphatidylinositol 1,4,5- triphosphate releasing it. to 1,4,5- inositol triphosphate (IP3) and diacylglycerol

39
Q

The role of inositol-1,4,5- triphosphate .

A

The inositol derivative binds to receptors on the endoplasmic reticulum causing a release of Ca2+ from intracellular stores. The increase in calcium causes the formation of Ca2+ calmodulin complex that mediates a wide range of effects as described.

40
Q

What is the role of diacylglycerol ?

A

Actives protein kinase C An enzyme that phosphorylates proteins. It reacquires calcium ion to achieve maximum potential

41
Q

Describe Phosphoinositide system

A

G protein receptors mediate as seen with adenylyl Cyclase however adenylyl Cyclase is replaced with phospholipase C which cleaves phosphophatidylinositol 4,5 biphosphate to inositol triphosphate and diacylglycerol . IP3 binds to specific receptor on the endoplasmic reticulum releasing Ca2+. Diacylglycerol and Ca2+ activate protein kinase C at the surface of the plasma membrane. Protein kinase C phosphorylates substrate proteins resulting in cellular responses.

42
Q

Example of signal to which cells respond

A

Light, hormone, antigens, developmental signals, growth factors, mechanical touch, testants, odorants, cell surface glycoproteins.