Building a Fruit-fly. Flashcards

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1
Q

The scientists who studied the development of fruit flies were particularly interested in what aspect?

A

In mutant fruit flies that led to a change in body axis.

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2
Q

What did the scientists do to make mutant fruit flies?

A

They treated male fruit flies with a mutagen called EMU which created random point mutations.

These would be breed to female flies and the offspring would be analysed to see if the body axis was disrupted.

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3
Q

How many independent mutations in the fruit fly were essential for life?

A

30,000.

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4
Q

How many independent mutations in the fruit fly were essential for embryonic development?

A

8000.

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5
Q

How many independent mutations in the fruit fly were essential for anterior/posterior or dorsal/ventral axis development?

A

750.

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6
Q

How many genes in the fruit fly were essential for anterior/posterior or dorsal/ventral axis development?

A

150.

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7
Q

What are maternal effect mutations?

A

Maternal effect mutations are caused by mutations in the mother where the offspring shows the phenotype.

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8
Q

Do maternal mutations damage the mother or the offspring?

A

They damage the offspring.

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9
Q

How do maternal affects damage the offspring?

A

Because the gene products that are deposited in the egg during oogenesis are faulty.

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10
Q

Can maternal affects be rescued by paternal genes?

A

No.

As the father makes no genetic contribution to the cytoplasmic determinants.

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11
Q

What are the genes of interest in fruit fly development?

A

Those that pattern the embryo.

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12
Q

How does a fruit fly develop.

A

It goes from a fertilised egg to a larvae which then pupates into a fly.

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13
Q

What is the first thing that happens to divide the fly egg up?

A

It is divided into its anterior and posterior sections.

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14
Q

What happens after the anterior posterior axis is determined?

A

The middle is determined.

Then smaller segments are determined.

The smaller segments are defined.

HOX genes tell the smaller segments what to form.

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15
Q

What happens if UV light is shone on the front of the embryo?

A

A larvae develops that lacks anterior structures.

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16
Q

What happens if cytoplasm is removed from the front half of the embryo?

A

A larvae develops that lacks anterior structures.

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17
Q

What happens if cytoplasm is removed from the front half of the embryo and placed in the middle another embryo?

A

The other embryo will develop 2 heads, one in a normal place and one in the middle.

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18
Q

What does the front of the embryo determine?

A

The head.

Anterior region.

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19
Q

What happens if a mother has a homozygous mutation for the BICOID gene?

A

The offspring will lack a head and a thorax.

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20
Q

If BICOID mRNA is synthesised and injected into eggs that lack BICOID, what happens?

A

A normal embryo will develop.

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21
Q

BICOID is an example of what?

A

A morphogen.

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22
Q

What is a morphogen?

A

They have the ability to direct and alter the fate of cells so that produce certain structures.

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23
Q

If BICOID is implanted in the middle of an organism, what will happen?

A

A 2nd head will grow at the site of implantation.

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24
Q

What happens if the gene NANOS is mis-expressed?

A

A mutation in this gene lead to a lack of posterior structures in the embryo.

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25
Q

If an embryo lacks NANOS and it is artificially inserted, what will happen?

A

A normal embryo will develop.

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26
Q

Where is BICOID and NANOS expressed in the embryo?

A

Bicoid in the anterior.

NANOS in the posterior.

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27
Q

How does the fruit fly embryo develop?

A

When the blastula is produced in fruit flies, nuclear division occurs.

Each of these nuclei will migrate to the periphery of the egg and end up sharing a common cytoplasm.

Membranes begin to form around these nuclei and we get small cells.

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28
Q

How is BICOID translated in the sinsisual blastula of a fruit fly?

A

BICOID mRNA can be translated in the anterior portion and then diffuse across the embryo until cells are formed.

The formation of cells traps BICOID proteins into the cells.

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29
Q

If BICOID is in all of the cells, how is does it define the anterior portion?

A

Because it is released from the anterior end and forms a gradient, therefore the expression is less at the posterior end.

30
Q

Which gene is responsible for defining the posterior end of the embryo?

A

The CAUDAL gene.

31
Q

How is CAUDAL expressed across the cytoplasm?

A

It is uniformly expressed across the cytoplasm.

32
Q

If CAUDAL is expressed uniformly across the cytoplasm then how can it form posterior sections?

A

The CAUDAL protein is high in the posterior and low in the anterior.

33
Q

What inhibits the translation of CAUDAL to a protein in the anterior axis?

A

BICOID.

34
Q

What happens during normal mRNA translation?

A

The mRNA will fold and a protein called polyA binding protein binds to the poly A tails.

The pABP will bring in the initiation factors from the ribosome to the 5 prime end of the mRNA.

35
Q

How does BICOID inhibit the translation of CAUDAL?

A

In the 3 prime end of the CAUDAL mRNA, there is a sequence that BICOID can bind to.

This inhibits the binding of the polyA binding protein.

The 4-EHP protein can bind to the 5 prime cap and block the ribosome resulting in no translation.

36
Q

How is the HUNCHBACK gene similar to the CAUDAL gene?

A

It is uniformly distributed across the cytoplasm whereas

But will help form the anterior features.

NANOS will suppress the translation of HUNCHBACK to stop it being expressed in the posterior.

37
Q

Is NANOS a morphogen?

A

No.

38
Q

NANOS establishes the region of what protein?

A

The HUNCHBACK protein.

39
Q

What 2 genes are expressed in the anterior region?

A

BICOID and HUNCHBACK.

40
Q

What 2 genes are expressed in the posterior region?

A

CAUDAL and NANOS.

41
Q

How is the middle of the embryo defined?

A

The middle will be defined where all of the proteins that define the anterior and posterior axis are low.

42
Q

The anterior posterior axis are ultimately defined by what?

A

Cytoplasmic determinants.

43
Q

Which genes turn on the GAP genes?

A

The HUNCHBACK genes.

44
Q

What do the GAP genes do?

A

They define the middle of the embryo and some of the side segments.

45
Q

Which genes turn on the pair rule genes?

A

The GAP genes.

46
Q

What do the pair rule genes do?

A

They form the smaller segments within the embryo.

47
Q

What genes turn on the segment polarity genes?

A

The pair rule genes.

48
Q

What do the pair rule genes do?

A

They define the segments.

49
Q

What are the homeotic genes also known as?

A

The HOX genes.

50
Q

What genes turn on the HOX genes?

A

The pair rule genes and the segment polarity genes.

51
Q

What do the HOX genes do?

A

They tell each segment what to build.

52
Q

What are the 4 types of GAP genes?

A

GIANT, KRUPPEL, KNIRPS and TAILLESS

53
Q

How are the 4 GAP genes expressed in the embryo?

A

As stripes.

54
Q

How does the French flag method explain the expression of the GAP genes?

A

There is a high concentration of a morphogen at one end and a low concentration at the other.

The strength of this morphogen gradient will turn on certain genes.

The genes that are expressed at low morphogen concentrations are repressed by the morphogen and will only be expressed at medium concentrations.

55
Q

Where is KRUPPEL expressed?

A

In the middle of the embryo.

56
Q

The expresison of KRUPPEL is regulated by what?

A

HUNCHBACK.

57
Q

How does HUNCHBACK regulate KRUPPEL?

A

High and low concentrations of HUNCHBACK protein will repress KRUPPEL.

Moderate concentrations will allow it to be expressed.

Therefore it can only be expressed in the middle.

58
Q

Why do multiple genes activate or repress GAP genes?

A

To sharply define the boundary of the gene.

59
Q

Gap genes have what binding sites?

A

Multiple binding sites in their promoters.

60
Q

How is expression of the GAP genes regulated if repressors and activators are bound to it?

A

If more repressors than activators are bound to the gene then the gene will be repressed and vice versa.

61
Q

Are HOX genes transcription factors?

A

Yes.

62
Q

How many sets of HOX genes do flies have?

A

1 set.

63
Q

How many sets of HOX genes do vertebrates have?

A

Multiple.

64
Q

What are the names of HOX genes in the anterior of the fly?

A

Antennapedia complex.

65
Q

What are the names of HOX genes in the posterior of the fly?

A

Bithorax complex.

66
Q

What happens if the HOX genes are disrupted in flies?

A

We can get homeotic transformations.

67
Q

What are homeotic transformations?

A

Where one segment takes on the identity of another segment.

68
Q

What happens if HOX genes are mutated in mammals?

A

One of the other sets of HOX genes will code for a normal phenotype.

69
Q

What happens when all of the HOX-10 genes are knocked out in mice?

A

It converts genes that would form lumbar spine into ribs.

70
Q

What happens when all of the HOX-11 genes are knocked out in mice?

A

The sacral vertebrae will turn into lumbar vertebrae.

71
Q

How does HOX gene expression affect the stylopod and zeugopod of the limb?

A

When the stylopod of the limb is being formed, HOX-9 and 10 are expressed in the progress zone.

However when the zeugopod forms, this pattern changes and the anterior expresses HOX-9 while the posterior express HOX-9 to 13.

If gene expression is disrupted then it can lead to polydactyly.