BMS Exam 1 Flashcards
Describe the function of the rough endoplasmic reticulum
- Proteostasis –> Protein Homeostasis
- Ex. Biosynthesis, Maturation, Secretory Proteins
- Glycosylation, Disulfide Bone Formation, and Oligomerization –> with the help of chaperones
- Properly folded proteins are transported in vesicles to the Golgi
- Chaperones identify improperly folded proteins and facilitate degradation in the cytosol by proteasomes
- ONLY proteins with a signal sequence are moved into the RER
Function of Chaperones
Identify improperly folded proteins and facilitate degradation in the cytosol by proteasomes
Describe the function of the smooth endoplasmic reticulum
Cellular Detoxification – specifically in liver cells
- storage of calcium ions (sarcoplasmic reticulum in muscle cells)
3 types of protein coats used for receptor-mediated endocytosis
- COPI
- COPII
- Clathrin
Use for COPII
Transport from ER to Golgi
Use for COPI
Transport from Golgi to ER
Use for Clathrin
Transport to and from plasma membrane
How does the SNARE Complex aid in exocytosis of vesicles?
Synaptotagmin
- Calcium binding protein on vesicle activates SNARE Complex
- VAMP, Syntaxin, and SNAP-25 alpha helices wind together
- Vesicle is brought closer to and fuses with target membrane
- Releases cargo
3 types of cytoskeletons
- Intermediate Filaments
- Microtubules
- Actin Filaments
Function of Intermediate Filaments
Structural Only
Function of Microtubules
Structural & Transport
Long Distance Transport
Tube-like, made from dimers
Has Polarity: +end: membrane
-end: nucleus
Function of Actin Filaments
Structural & Transport
Short Distance Transport
Double Stranded; made of globular (G) actin
Has Polarity: +end: membrane
-end: nucleus
Types of Molecular Motor ATPases & Function
Kinesin - moves toward + end of microtubules
Dynein - moves toward - end on microtubules
Myosin V - moves towards the + end on F-actin
Myosin VI - moves towards the - end on F-actin
Steps Involved In The Functioning of The SNARE Complex
v-SNAREs (in vesicle; VAMP/Synaptobrevin) bind to t-SNAREs (in target membrane; Syntaxin/SNAP-25)
Both are types of proteins
Water is squeezed from membranes
Stalk formation
Hemi-fusion
Fusion
What type of cell junction permits transport?
Gap Junctions
What type of cell junction selectively seals?
Tight Junctions
What type of cell junctions offer mechanical support?
Anchoring Junctions
What type of cell junction?
- Connect cytoplasm to adjacent cells
- composed of connexins
- found in bone, cardiac, and muscle
Gap Junctions
What can be the result of dysfunctions in gap junctions?
Cardiac Arrythmias
Examples of where gap junctions are found
Bone, cardiac, muscle, etc.
What type of cell junction?
- Holds cells together and forms a near leak-proof intercellular seal
- composed of claudins
Tight Junctions
Examples of where tight junctions are found:
Epithelial tissue lining the digestive tract, nephron, etc.
Dysfunction of tight junctions can result in:
Cancers and inflammation
What type of cell junction?
- Connect cells to each other and the extracellular matrix
- classified based on location
- Lateral Surface: Adherens & desmosomes
- Basal Surface: Hemidesmosomes & Focal Adhesions
Anchoring Junctions
Types of Anchoring Junctions & their Properties
Adherens: Cadherins & Actin
Desmosomes: Cadherin & Intermediate Filaments
Hemidesmosomes: Integrins & Intermediate Filaments
Focal Adhesions: Integrins & Actins
3 types of interactions with water & their properties
- Hydrophilic - charged and polar
- Hydrophobic - uncharged and nonpolar
- Amphipathic - have regions that are BOTH hydrophobic and hydrophilic
What is the Central Dogma?
All the information that a cell needs for life in encoded in the DNA
What Process?
- Information in a DNA strand is copied into a mRNA
- Initiated by factors binding to a promoter region
Transcription
What Process?
- A protein is synthesized from the information contained in mRNA
- tRNA brings amino acid to the ribosome for the growing polypeptide chain
Translation
What happens in the Primary Protein Structure?
Sequence of a chain of amino acids
What happens during the Secondary Protein Structure?
Local folding of the polypeptide chain into helices or sheets
What happens during the Tertiary Protein Structure?
3-dimensional folding pattern of a protein due to side chain interactions
What happens during the Quaternary Protein Structure?
Protein consisting of more than one amino acid chain
3 Responses to Misfolded Proteins
- ER-Associated Degradation (ERAD) Pathway
- The Unfolded Protein Response (UPR)
- Autophagy
What is the ER-Associated Degradation Pathway?
Ubiquitin tagged proteins are degraded by proteosome