Block 11 - L3-5 Flashcards
What are two prominent viral causes of respiratory disease?
- Orthomyxoviruses (influenza)
2. Paramyxoviruses (respiratory syncytial virus and parainfluenza virus)
What is the most common route of viral infections (including influenza virus)?
Inhalation (aerosol droplets can contain viruses)
What is the incubation period for the influenza virus?
1-3 days
Influenza virus shedding precedes symptoms by how many days?
1 day
What are the symptoms of influenza?
Central - headache Systemic - fever (usually high) Muscular - extreme tiredness Joints - aches Nasopharynx - runny or stuffy nose, sore throat, aches Respiratory - coughing Gastric - vomiting CXR - lung consolidation
What causes the symptoms of influneza?
Cytopathic infection and immune response
How does the influenza virus cause ARDS?
- Infects epithelial cells of the respiratory tract
- Cell die (direct effects of the virus + interferon)
- Efficiency of ciliary clearance is reduced, impairing the mucus elevator
- Reduced clearance of infectious agents from the tract
- Gaps in the protective epithelium provide other pathogens access to other cells
- Bacterial pneumonia can develop; ARDS can develop
What is almost never observed in influenza virus infection?
Viremia
Which populations can experience severe cases of influenza?
Co-morbidities: asthma, COPD, CHF, obesity, bacterial pneumonia, immunosuppression and cytokine dysregulation
Patient populations: infants (smaller airway passages), pregnant or <2 weeks postpartum, age (<5 and >65)
Which type of influenza causes ~70% of human disease?
A (B and C cause the remaining 30%)
Describe the structure of influenza.
Enveloped negative-strand segmented RNA virus with a pleomorphic structure and 8 single-stranded negative-strand RNA strands in each particle
HA (hemagglutinin) and NA (neuraminidase) stud the particle
Which viruses can be killed by organic solvents and why?
Enveloped viruses such as influenza can be killed by organic solvents (dissolve the lipid envelope)
What is the infection cycle of the influenza virus?
- One virus enters cells apically and newly-made progeny viruses (1000+) egress after 10 hours (apically)
- Enter host cell nucleus and are transcribed; exit to cytoplasm and are translated to viral proteins (including polymerases which return to the nucleus to amplify infection)
- Move to the plasma membrane to form platforms for viral budding and epical egress
Where do anti-viral antibodies bind on the influenza virus?
Epitope sites on HA
How do influenza epidemics occur?
Antigenic drift caused by point mutations, particularly in the hemagglutinin spikes
How doe influenza pandemics occur?
RNA segment reassortment leading to antigenic shifts (8 RNA segments, influenza is widespread in different animals)
How are influenza virus vaccines made?
Strains are grown in chicken eggs, purified from allantoic fluids, inactivated, quality-controlled, and injected intramuscularly; live-attenuated vaccine is also available for intranasal delivery
How long does it take for protective antibodies to form after flu vaccination?
2-4 weeks
Antibodies against the influenza virus target what aspect of the virus?
Bind to HA proteins and prevent virus entry and membrane fusion
How are influenza virus vaccines classified?
- Serotype (A, B, C)
- Geographic location of the isolate
- Host of origin
- Strain number and year of isolation
- HA and NA subtypes
What are the four laboratory tests that can be used to diagnose influenza virus?
- Immunofluorescence (rapid and specific, but labor-intensive/requires quality reagents)
- Enzyme immunoassay (rapid and can be automated, but expensive and can be insensitive)
- Culture (confirms infective virus, but is slow and some viruses cannot be cultivated)
- PCR (fast, sensitive, and specific, and expensive with some false-positives)
What are the two types of anti-influenza drugs and what do they target?
- Amantadines (target M2)
2. NA inhibitors (target NA)
Describe the MOA of amantadines.
Prevent M2 (ion channel) from functioning; this prevents the interior of the flu virus particles from becoming acidified in the endosome during entry; normally, this acidification loosens up the contacts between RNA and M1 to allow the RNA to flow into the cytoplasm
Describe the MOA of neuraminidase inhibitors.
NA is a receptor destroying enzyme that strips away sialic acids from infected cells, so that when new viruses bud off of the infected cells, they will not re-bind back onto the same cell from which they arose; when NA is blocked, the viruses will re-bind, restricting the infections to a localized area. In other words, these drugs retard virus dissemination.
What are some additional common respiratory viruses?
Rhinovirus Coronavirus Adenovirus Influenza Para-flu and RSV HSV and EBV
True or false - the same virus can cause different disease patterns (bronchiolitis, common cold, croup, influenza-like pneumonia) depending on the extent of infection and host response.
True
True or false - Rhinoviruses, Adenoviruses, and Coronaviruses can all cause the common cold.
True
Rhinoviruses cause acute infections in the ___. Vaccines are of limited utility - why?
Respiratory tract; diversity (hundreds) of serotypes
Adenoviruses cause infections in the respiratory tract, as well as ___ (aka ___). There is a live-attenuated vaccine to some serotypes, but no antiviral drugs yet.
Conjunctivitis; pink eye
Coronaviruses can cause both respiratory and ___ infections. They are common in children and often cause ___.
GI; croup
Small changes in the surface glycosylation of the influenza virus are called ___.
Camouflage (block antibody binding site)
What is the genome and family of influenza virus?
Segmented negative strand RNA orthomyxovirus
How is influenza virus most common transmitted?
Respiratory
What is the current method of detection of influenza virus?
Film array RT-PCR assay
What is the mechanism of pathogenesis of influenza virus infection
Exuberant immune responses cause lethargy, muscle aches, fever while necrotic infected cell debris and inflammatory infiltrates occupy airways and impede breathing
Are there any anti-viral therapies available against influenza virus?
Amantidine or Neuraminidase inhibitors (tami-flu)
Are there any vaccines available against influenza virus?
- Live-attenuated vaccine (flu-mist)
2. Killed virus vaccines with current year HA and NA
Why do people need to be vaccinated annually for influenza virus?
Because new influenza strains arise due to antigenic drift and antigenic shift
What causes pandemic influenza virus outbreaks?
RNA segment reassortment causing antigenic shift
What are common causes of respiratory infections?
Viruses (82%) - rhinovirus, parainfluenza virus, influenza virus, RSV, adenovirus, enterovirus
Bacterial (13%) - GAS
Mycoplasma and other (4%)
When do influenza and RSV present temporally?
Winter (peak)
What are the viruses in the paramyxoviridae family?
- Parainfluenza (types 1-4)
- Mumps
- Measles
- RSV (types A and B)
- Metapneumovirus (types A and B)
How does RSV present in infants/young children, adults, and elderly?
Infants/young children - LRTI
Adults - milder URTI
Elderly - pneumonia
How is RSV transmitted?
Respiratory (generally requires close contact)
What type of patient is at high risk for complications of RSV?
Infants who are premature, immunocompromised, or have congenital heart disease
Discuss the pathology of RSV infection.
Necrosis of bronchiolar epithelium in 18-24 hours, submucosal edema, bronchioles occluded with mucus and cellular debris, hyperinflation and air trapping
How are respiratory specimens worked up?
RT-PCR (1-3 hours, FilmArray Respiratory Panel tests for 20 pathogens)
What is the preventive treatment for RSV in high-risk infants?
Palivizumab - humanized Ig - expensive but effective
What is the MOA of Palivizumab?
Monoclonal Ab that binds RSV F (fusion) protein, prevents attachment to the cell
What is human metapneumovirus (hMPV)?
A new virus that presents similarly to RSV, with a less severe disease outocme